Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                            <---------ZAT14                                   -------                                            --------->ZAT18                                 <-------TEIL                                            <---------ZAT18                       <---------LBD16                                            --------->ZAT14         ---------->DOF2        --------->ALFIN1                                        --------->DAG2         ----------->GT1    ------>ZmHOX2a(2)                                       ---------->DOF2       ---------->DOF2     <------ZmHOX2a(2)             ----------->GT1     ----------->GT1          ----------->GT1       --------->ARR14(2)   ---------->DOF2               --------->ANAC58        --------->DAG2         <---------ARR14(2) ----->AHL20(2)                  --------->ANAC58       ---------->DOF2        <---------GLK1(1)   <- ->ICU4   <------ZmHOX2a(1)    ---------->DOF2       --------->ANAC58 --------->ANAC58  <---------AtMYB61 --------->ANAC81             <------ZmHOX2a(1)      --------->ANAC58 --------->ANAC58  --------->ALFIN1   taaaacaaagaaggagagtaaatgcaaatggaggaaagcaaaaaagtgaactcacaagaaaagtaaagagaaaagcattagagatcgggagaggtgcagc  9686500                                                                            <---------ZAT14                                                                     <---------ABI4(2)                                                                     <------NtERF2                                                                     --------->ATERF1(1)                                                                    --------->ABI4(1)                                                                    ------>NtERF2                                                                    <---------ATERF1(1)                                                                   --------->DEAR3(1)                                                                   --------->RAP2.6(2)                                                                   --------->ANAC58                                                                   --------->ATERF1(2)                                                                   --------->RAP2.3(2)                                                                   <---------ATERF1(2)                                                                   --------->RRTF1(3)                                                                  --------->ERF1                                                                  --------->DEAR4(2)                                                                  --------->RAP2.6(1)                                                                  --------->RRTF1(1)                                                                  --------->RAP2.3(1)                                                                  --------->ORA47(2)                                                                  --------->ATERF1(1)                                                                 ------>NtERF2                                                                 --------->ABI4(1)                                                                 <---------ATERF1(1)                                                                 <---------DREB2C(1)                                                                 <---------DEAR4(2)                                                                 <---------RAP2.3(1)                                                                 <---------At4g35610                                                                --------->DEAR3(1)                                                                <---------ATERF1(2)                                                                --------->RAP2.3(3)                                                                --------->RAP2.3(2)                                                                --------->ATERF1(2)                                                               --------->ATERF1(1)                                                               --------->ERF1 <---------ANAC46                                                               --------->DEAR4(2)                                                               --------->RAP2.3(1)                                                              <---------ATERF1(1)                                                             <---------DEAR3(1)  <---------ZAT14                                                         <---------At4g35610<---------ZAT2                                                         --------->At4g35610--------->ZAT2                                                      --------->TGA2(2)     --------->ZAT14                                                     <-----------HVH21<---------ALFIN1                                                     <-----------TGA1--------->MYB46(3)                                                    --------->bZIP60(1)  --------->DEAR3(1)                                                    --------->TGA1a--------->ANAC58    ------->TEIL                                    <---------TGA1a--------->RAP2.3(3)    --------->ZAT18                                 --------->TGA2(1)--------->ERF1  --------->ZAT14                                   <---------TGA2(1)----------->HVH21  <---------ZAT18                                   <---------ANAC55(2) <------NtERF2  --------->ZAT18                                   <---------bZIP60(1)------>NtERF2  <---------ZAT14                                   <---------O2--------->ANAC46 --------->ZAT14 --------->ALFIN1                                   --------->O2<---------DEAR3(1) ----ZAT2                                          --------->RAP2.6(3)--------->DEAR3(1)           <- --->At4g35610                                     ----------->STF1--------->ANAC46 --------->At4g35610 --->ZAT2                                          <-----------STF1--------->DREB2C(2)  ----------->HVH21 ----At4g35610          <---------ATERF1(1)       <---------TGA2(2)--------->RRTF1(2)  --------->At5g28300 ---->RAV1(1)    <---------ZAT2                  ----------->TGA1--------->At4g35610<---------At4g35610 --------ANAC46  --------->ZAT2                  ----------->HVH21<------NtERF2 --------->ALFIN1   --   agagtgtaccctgagagagagctcggctactccttgaagttgtgcttagacatgacgtcagcctcgccgccgccaccgtgctgtgcagcggtaacagcga  9686600                    =====================HOX2a_HOX2a            --------->ARR14(2)           <---------ZAT2                                                                          --           --------->ZAT2  ---------->DOF2                                             --------->MYB52(1)           --------->At4g35610      <---------HSFB2a(2)                                <---------DOF5.7(2)           <---------At4g35610      --------->HSFB2a(2)                               <---------ZAT14 --------ZAT14      <------ZmHOX2a(1)                            --------->At4g35610  <---------ARR14(2) ------->ZAT14  --------->LBD16   <------ZmHOX2a(2)        ---------->DOF2 --------->At4g35610     <-   ctgaacacatcccagctccgaaggacatctaaagagatcgagaaatttgaaatttcagaaacaaaggagatgaaattggctgaatgagtaaacggatgca  9686700                                                                                ------>ZmHOX2a(2)                                                                               --------->ARR14(1)                                                                               <------ZmHOX2a(2)                                                                              --------->ARR11(3)                                                                              --------->ARR11(1)                                                                              --------->ARR14(2)                                                                        <------NtERF2                                                                       ------>NtERF2                                                                      --------->DEAR3(1)                                                                      ----------->HVH21                                                                     --------->DEAR3(2)                                                                     --------->RAP2.3(1)                                                                    <---------ATERF1(1)                                                                    ------>NtERF2   --------->ALFIN1                                                                    --------->ZAT2  <---------AtMYB61                                                                    <---------ZAT2--------->LBD16                                                                  --------->ATERF1(1) <-------GAMYB                                                              <---------TGA2(2)--------->CCA1(2)                                                             ----------->TGA1--------->GLK1(1)                                                             ----------->HVH21<---------ARR14(2)                                                           --------->At4g35610<---------AGP1                                                           <---------At4g35610--------->AGP1------>ZmHOX2a(2)                                 <-------GAMYB            <---------MYB46(3) <---------GLK1(1)                                 <---------ANAC58       <---------At4g35610 ----------->ARR10       -                                 <---------ANAC58      --------->LBD16------->GAMYB<---------MYB52(1)                                <------MYB46(1)       <---------RAP2.6(2)<---------ANAC46  --------->At4g35610                              --------->ALFIN1       <---------LBD16<---------At4g35610    <---------At4g35610                 <------ZmHOX2a(1)                 <---------ARR14(2)--------->ATERF1(1)  <---------AGP1        <---------LBD16     --------->ALFIN1       --------->ARR14(2)--------->MYB46(3)<---------WOX13(1)       ----------->RAV1(2)<---------ANAC58        <---------GLK1(1) --------->At4g35610<--------P  <X  <-------TEIL  ----------->GT1 <------MYB83      --------->GLK1(1)--------->DEAR3(1)<---------MYB46(3) ------->At4g35610        <---------ANAC58     --------->ANAC58   <-----------RAV1(2)--------->MYB55(2) --------At4g35610        <---------ANAC46     --------->ANAC58 --------->ANAC46<---------LBD16    <-   cagatgcaaacctggagaaggagaaatggcgagtgggttgagaaggaagacgaaatccggctgatgacgcagccgacgtagatccggtggttgatctgag  9686800                                                    >>>>>>>>>>>>>>>>>LFY                                                   --------->ANAC58                 --------->ANAC58                  --------->ANAC58               --------->CCA1(2)                 --------->At4g35610   --------->CCA1(2)                         --------->ANAC58  <---------ARR14(2)      ----------->GT1    --------->ANAC58                                ------>ZmHOX2a(2) ---------->ARR10--------->ANAC58          ---------->DOF2               >>>>>>>>>TBF1   ----------->HVH21 XXXXXXXXXXXXXXXXXXXMIR865-3P          --------->SPL7           ---------->DOF2  --------->ANAC46 -------P   ----------->ARR10   ---------->DOF2--------->YAB1 <---------YAB1 --------->CCA1(2)     --   ggtagatttgagggaagagacggaagctctgttaaaaagcttacgacaagcagaagccattgttatcaaagagaagaagaaacacgacgatgtgatcgat  9686900                                                                             <-------GAMYB                                                                            ----------->GT1                                                                            <------MYB46(1)     <----                                                                            <---------MYB46(3) ------                                                                            <------MYB83      <------                                                                          <--------P         --------                                        *TSS                       <------------CBF         <--------                                      --------->ANAC58            --------->ATHB12         <---------                          ----------->GT1                        <---------YAB1       <------MYB83 <-                         <---------TOE1(3)                      <-----------TBP       <------MYB46(1)                         <---------TOE2(3)     <-----------GT1 <----------DOF2   <---------YAB1------ -------->DOF2<-----------GT1         --------->ANAC58 <----------DOF2  <XXXXXXXXXXXXXXXXXXXXMIR864-5P   cgaaagaaaggtttttctactgtctataaggtttttaggcaaacaaatatttcgctccttttgggcttttattggagttggttatatttggtttacatta  9687000        <-----------GT1 --------CBF                                                                <---------YAB1 --->ATHB51                                                             --------->KAN4(2) ---YAB1--------->MYB52(1)                                             --------->KAN4(1) ->TOE2(3)<---------LBD16                           <---------AHL20(2) <---------KAN4(1) -------AGL15                                       --------->AHL20(2)<---------YAB1 --------AG                                 ------>MYB83             <---------GLK1(2) --------MYB46(3)        <---------ANAC46   ------>MYB46(1)        --------->ICU4 --->ATHB12 --------->LBD16       <----------DOF2------->TEIL    ---------->DOF2------>ZmHOX2a(2)<---   ttggttaacttaaccggatgtatagttgtggattagctttagtaccaaatgtatatatatagcaatgtaaagattattctgatcgagttgatgagaaaat  9687100                                                                                  <---------ARR11(3)                                                                          ------>ZmHOX2a(2)                                                                         --------->GLK1(1)                                                                         <---------GLK1(1)                                                                         <------ZmHOX2a(2)                                                                        <---------ARR14(2)                                                                        <-----------ARR10                                                                        --------->AGP1                                                                        <---------AGP1                                                                        --------->ARR14(3)                                                                        <---------ARR11(3)                                                                        --------->ARR11(3)        <--          <----------DOF2                                               --------->ARR14(2)    -------      ------->GAMYB--------->MYB46(3)                                  <---------CCA1(2)  ------>ZmHOX2a(2)     --------->MYB46(3)                       <XXXXXXXXXXXXXXXXXXXXXMIR845B       <---------GLK1(2)     <---------MYB52(2)                  --------->YAB1               ----------->ARR10  <---------At4g35610 ------ICU4        <------------MYB.PH3(2) <XXXXXXXXXXXXXXXXXXXXXXXMIR829.1       --------->ARR11(3)   catttcaacaaactttctctaacaaactctctcgttctctcattcgtaatatggtatcagagctatcaagctcagatctccatagattttgatctgattt  9687200                                                                            <---------ZAT18                                                                            --------->ZAT18                                                                            <---------ZAT14                                                                        --------->DAG2                                                                       ---------->DOF2                                                                <---------At4g35610         <---------At4g35610                                    <---------ZAT2                  <----         --------->At4g35610  ----------->GT1                   --------->At4g35610--------->MYB46(3) --------DOF2                 --------->YAB1                    --------->ZAT2   --------->ARR14(2) -->GLK1(1)             <<<<<<<<<<<<<<<<<LFY                <-----------GT1 --------->ZAT14     <----   ctttgtttttgagctcaattcgttctctacaatggtaactcgttcgaagtcttgaacgagtttttcagctcggaaaagttcactatccactggtattgtc  9687300                                  --------->ZAT2                                  --------->At4g35610                                  <---------At4g35610                         <---------ZAT2            <---------RVE1(1)                         --------->At4g35610       <---------CCA1(1)                         <---------At4g35610      <---------ARR11(3)   <----------DOF2                     <---------HSFB2a(2)      <---------LBD16          --------------->AGL15                     --------->HSFB2a(2)    <-----------GT1--------->ARR14(2)                   ----------->RAV1(2) <---------YAB1      <---------ARR14(2)            <------ZmHOX2a(1)           ------>ZmHOX2a(2)      <---------ZAT2--------->LBD16        <---------------AGL15 -----ANAC58 <---------ANAC58 --------->HSFB2a(2) --------->ARR14(2)  <-----------------AGL2 -----ANAC58 <---------ANAC58 <---------HSFB2a(2) <---------ARR14(2)  <-----------------AGL3   ------   gtttctatttcgatctcgtgcttctggagcttcgcgagctcacgattcaccggatatttcaaatccgaactagcttttaatggcatttataggattagaa  9687400  Previous    Next  AGI:  At4g17310.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47455.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47455.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47455.6); similar to hypothetical protein 25.t00029 [Brassica oleracea] (GB:ABD64980.1) Range:  from: 9685213    to: 9686940    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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