Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   --                                                                                                   --                                                                                                 <---          <---------DOF5.7(2)                                                              --------->ANAC55(2)         <---------WRKY45                                                           --------->HSFB2a(2)         <---------WRKY12                                                           <---------HSFB2a(2)         <---------WRKY38(1)                                        --------->At4g35610<---------ARR11(3)        --------->DOF5.7(2)                             --------->ZAT18        <---------DAG2--------       <-----------HVH21                                <---------ZAT18  <----------DOF2<------ZmHOX2a(2)     <-------TEIL                            --------->ZAT6         <---------At4g35610--------->ARR11(3) -----MYB46(3)         ----------->GT1     <-----------GT1     --------->YAB1  <----------DOF2   ---- ---GLK1(2)       <---------YAB1 ---------->DOF2    --------------->AtSPL8  <-----------GT1<---------ANAC55(2)   gttgacattcgtcaacgcatatgagtgctaaaacccaaagcctcttaacaatacatagtaccctataatgagctgcttttacttttccagatcatgtgac  9681200     --------->YAB1    <<<<<<<<<ARR1    <<<<<<<<<ARR2    <---------ATHB12  --------->YAB1     ================================================================================  --------->WOX13(1) <---------------AGL15 --------->MYB46(3)  --------------->AGL15                                                 <---------MYB46(3) ---->MYB46(1)     --------->YAB1                                                       <------MYB83 --------->RAV1(1)--------->ZAT6                                                     <---------ANAC46 ---->MYB83     --------->YAB1                                                       <---------ANAC58 ------MYB59    <--------ATHB1<---------CCA1(2)                          ---------->DOF2<------MYB46(1) --->HVH21     <---------ATHB51                              --------->ANAC58        <---------ANAC58 ----->MYB46(3)<---------ATHB12<-----------GT1               --------->ANAC58   <---------ALFIN1 <---   ccaacaatcatattgcaataatactaatttttgtatccatacacttatgctccagtttgacacaagacaattactaaaagacacactgcttggtggtgac  9681300                    <-----------RAV1(1)                   <---------TOE2(3)                  --------->YAB1                  <---------ICU4         ----------->GT1     --------->AHL20(2)     <---------AHL20(2)    --------->At4g35610  --------------->AGL15  <---------ANAC46                            <----------DOF2  <----------DOF2<---------ATHB51                                 <-----------GT1  <---------------AGL15 <---------At4g35610                   <---------ARR11(3)      --------->YAB1 =================MADS_MADS<---------At4g35610                --------->ARR11(3)     <-------TEIL ------MYB59   --------->YAB1 -------->P  <---------CCA1(2)   <---------GLK1(2)    <---------ARR14(2)   ttaacttttaaatgtaacaataatgttgctgctaccctgaatttctatctttctaatggcaaaagatttttcttttcaataggccgattcatagttgaaa  9681400                                                                        ------>MYB83                                                                        ------>MYB46(1)             -                                                                     ----------------->AGL1         <                                                                     ------------>CBF               <                                                                   <-----------GT1                 <-                                                               <--------P<---------ATHB12          <-                                                            <---------MYB46(3)             -------->P                                                           <---------ANAC46                ------>MYB83                                                           <---------ANAC58                ------>MYB46(1)                                                           <---------ANAC58              ------->GAMYB        ----------->HVH21                     ---------->DOF2 <-------GAMYB             -------------      <------MYB46(1)                     <---------At4g35610<------NtERF2--------->YAB1--------->MYB46(3)      <------MYB83                        --------->At4g35610----------->GT1    --------->ETT(1) <---   acatttgtaggtgatgggcctctagactctaaatgggcttatttagctaaaagtttacagggcgggttaataccaatcttggtcgggttaaccaacttgg  9681500                                                                                       <------NtERF2                                                                                       --------->RAP2.3(1)                                                                                       --------->ATERF1(1)                                                                                      --------->LBD16                                                                                     <---------DEAR3(1)                                                                                     <---------ATERF1(2)                                                                                  <-----------RAV1(1)                                                                               --------->ARR14(2)                                                                             <-------MYC3                                                                             ------->MYC3                                                                            --------->TGA1a                                                                            <---------TGA1a                                                                            --------->O2                                                                            <---------O2--------->DEAR3(1)                                                                          <---------ALFIN1                                                                        <------NtERF2--------->DEAR3(1)                                                                        ------>NtERF2--------->ATERF1(2)                                                                        --------->ATERF1(1)                                                                       <---------ATERF1(1)             <---------------AGL15                                     ------>NtERF2<---------LBD16    <---------MYB46(3)                                                 --------->RAP2.6(2)   --------->ALFIN1                                                    <---------RAP2.3(1) --------->REM1(1) <---------ANAC46                                                     <---------ANAC58<---------ATERF1(1) <-------GAMYB                           ------>ZmHOX2a(1)            <---------RAP2.6(2) <------NtERF2 -------->MYB55(2)                      --------->TOE2(3)             <---------DEAR3(1)----------->HVH21 ---------DEAR3(2)                ------------>CBF                    --------->ATERF1(2)------>NtERF2 ---------MYB46(3)               --------->ANAC58  <---------DOF5.7(2)<---------ANAC58------>NtERF2 ----------RAV1(2)               --------->ANAC46  *TSS               <---------ANAC46<---------RAP2.3(1) --------ANAC46                  --------->ANAC58 --------->ZAT14     <---------ATERF1(2)----------->RAV1(1) ---->AGL1 ------------>CBF     <---------LBD16   <---------ZAT14    --------->RAP2.6(3)<---------ETT(2) --------HVH21        >>>>>>>>>TBF1    --------->YAB1           <---------YAB1 <---------ARR14(2)   gtcgggtggatgttccaatatgaagaagaagactcgcgcaatcctaaaacagtgaacgattcgattacaatggcggccacgtttctgccggcgacatctc  9681600                                                                                      <---------ANAC46                                                                                     <------NtERF2                                                                                     --------->ATERF1(1)                                                                                    ------>NtERF2                                                                                    --------->ABI4(1)                                                                                   --------->RAP2.3(2)                                                                                   --------->DEAR3(1)                                                                                   --------->RAP2.3(3)                                                                                   --------->RRTF1(3)                                                                                   <---------DEAR3(1)                                                                                  --------->RAP2.6(1)                                                                                  --------->ATERF1(1)                                                                                  --------->RAP2.3(1)                                                                                  --------->ORA47(2)                                                                                  --------->ERF1                                                                                 ------>NtERF2                                        <-----------GT1                          <---------ATERF1(1)                                   <---------YAB1                                <---------RAP2.3(1)                                 --------->YAB1                                 --------->ANAC46                                <---------ATHB12                       <---------ANAC58                        <---------At4g35610               <---------YAB1    ------>ZmHOX2a(1)                 --------->ZAT14<---------YAB1    <-----------GT1      <---------ANAC58  --------->ZAT14   tccgtctaactcaaaactctactctccgcttcttatcattcttcaccatttctaacccttcttattctctcttccgtcctctacgccgccgtgttctccc  9681700                                                                        ----------->HVH21                                                                      --------->LBD16                                                                    <---------LBD16                                                                    <-----------RAV1(2)                                     <----------DOF2                <------NtERF2                                    <---------ANAC58              <---------ARR14(2)                ------>NtERF2   <---------At4g35610               --------->ARR14(2)               --------->LBD16  --------->GLK1(1)        --------->GLK1(2)               ------>NtERF2    <---------GLK1(1)       <---------GLK1(2)              <---------RAP2.6(2)   <---------ANAC58    --------->ARR14(2)             <---------LBD16   --------->ARR14(2)   <---------LBD16------>NtERF2                <----         <---------DAG2       <------NtERF2   <---------At4g35610--------->At4g35610            <----         <----------DOF2     --------->LBD16  <---------ZAT2     <---------At4g35610          -------        <---------ANAC58    --------->DEAR3(1)--------->At4g35610<---------ZAT2    --------->DAG2        <---------ANAC58   <---------LBD16    --------->ZAT2     --------->ZAT2   ---------->DOF2   tcccttcgatgcttttccggccaattctcgccggagatgcttttgcacagctgtttcggaatctctcggctccggtgatggaaataaagttgagagttac  9681800                                                                      --------->SPL7                                                --------->At4g35610  ------>NtERF2                                                <---------At4g35610 <---------SPL7                 --                                          <---------ANAC46          ----------->HVH21              --                                          <---------TOE1(3)         --------->ZAT18            <-----                                          <---------TOE2(3)        --------->ATERF1(1)   --------->ETT(1)                                    --------->DAG2                --------->At4g35610    <---------ANAC46                                   ---------->DOF2                <---------At4g35610   --------->ALFIN1 -----ANAC46                 <---------LBD16<------ZmHOX2a(1) --------->ALFIN1         <-----------HVH21 -----ANAC55(2) --------->DAG2  <------ZmHOX2a(1)        ---------->DOF2    <------ZmHOX2a(1)<------- -->CCA1(2)    ---------->DOF2 --------->LBD16<---------GLK1(1) <------ZmHOX2a(1)    <---------DEAR3(2)   gagaaacgatttgggagtaaagttggagaattcaggaaaaagttgaggatagctgaagtgaaaggaggagcggacgaaggactgagtcgggtcgggcaga  9681900                        <---------ALFIN1                       <---------ZAT14                    <---------ANAC58                    <---------ANAC58                   --------------->AtSPL3                   <-------TEIL                <------MYB46(1)                <------MYB83               <------MYB46(1)               <---------MYB46(3)               <------MYB83               --------->MYB59             <<<<<<<<<MYB98                               ----------->GT1                          --             <--------P<---------ZAT18              --------->ATHB12                       --------->WOX13(1) ------->TOE2(3)<---------ANAC58            <-----------HVH21                            <---------YAB1 ------->TOE1(3)<---------ANAC58       --------->ZAT14   <---------TOE1(3)              <-----------GT1 -NtERF2    <---------ANAC58           <---------ZAT14   <---------TOE2(3)         <----------DOF2<-- ---CDC5    <---------ANAC58     ------>ZmHOX2a(2) <-------TEIL         <---------DAG2 <-----------GT1   gccttaacattatgggttgggttcgtacacttcgatctcagagcagtgtcacattcattgaggtaaattctcaacctttcttcatctttttatcaatctc  9682000                                                                    <---------ANAC58          ----------->HVH21                                         <---------ANAC58        --------->At4g35610                                       <---------YAB1        <---------At4g35610                                    <-------TEIL   --------->ATHB12              <-----------RAV1(1)       <---------YAB1                --------->At4g35610 <---------WOX13(1)         <---------AHL20(2)           --------->YAB1     --------->ARR14(2) ------->ATHB12        <------------------------ANAC81   -------->HAHB4     <---------ARR14(2)  <---- -------YAB1         <---------AtMYB61    <---------MYB46(3)<---------MYB46(3)           <---------At4g35610   ttgattgatttgctgacaaagttttggtttttattttgttgttgttgttggaagataaatgatggttcatgcttatcgaatttgcaatgtgtgatgactt  9682100  Previous    Next  AGI:  At4g17300.1    Description:  NS1 (OVULE ABORTION 8). Identical to Asparaginyl-tRNA synthetase, chloroplast/mitochondrial precursor (SYNO) [Arabidopsis Thaliana] (GB:O48593;GB:O23573); similar to SYNC3, ATP binding / aminoacyl-tRNA ligase/ asparagine-tRNA ligase/ aspartate-tRNA ligase/ nucleic acid binding / nucleotide binding [Arabidopsis thaliana] (TAIR:AT1G70980.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ77678.1); similar to asparaginyl-tRNA synthetase, putative [Brassica oleracea] (GB:ABD65116.1); similar to putative asparaginyl-tRNA synthetase, chloroplast/mitochondrial precursor [Oryza sativa (japonica cultivar-group)] (GB:BAC1552 Range:  from: 9681551    to: 9684987    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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