Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                 ----                               <---------YAB1                                                  ------            --------->ZAT14<---------ANAC58                                             <---------ANAC58            <---------ZAT18<---------ANAC58                                             <---------ANAC58 ------ZmHOX2a(2)         <---------HSFC1(2)                                 --------->ANAC58-------- ------->ARR11(3)         <---------At4g35610          --------->ZAT6        --------->ANAC58<------- ------>At4g35610         --------->HSFC1(2)          <<<<<<<GRF7            --------->ANAC46-------- -------At4g35610       <--------P                  ----------->HVH21  <---------ANAC46 <---------ANAC46 --------TaNAC69(2)    <---------MYB52(1)  <---------ZAT6        <---------YAB1 --------->MYB52(1)<--   agatcaccctctagtagactcgtctggtagcttctgatgggagaagtgtaaaccctgacagtaccatctgattgtggataagcaacgatggcttgagctc  9680000                               --------->ANAC58      <---------LBD16          --------->ANAC46 <---------ALFIN1    <---------ZAT14                                                               -- --------->AtMYB61   <-------TEIL                                                                  -- ------>ANAC46    <---------ANAC58                                                        --------->ALFIN1 ----->MYB46(3)   <------MYB83 --------->ANAC58                       --------->ANAC58  --------->LBD16 --->PCF2         <------MYB46(1)                             --------->ALFIN1         --------->LBD16 ->ZAT2 --------->LBD16  --------->DEAR3(1)                 <-----------RAV1(1)   --------->ATERF1(1) --At4g35610      <---------ANAC58 --------->ANAC58   <---------At4g35610        <---------ATERF1(1) ->At4g35610     <---------MYB46(3)--------->ANAC58   <---------ZAT2  --------->ANAC58<---------LBD16 -------ALFIN1 <---------MYB52(1)  -------->P         --------->At4g35610    --------->ALFIN1  <-----   ccaccattcccgtagacgttgggttcacagcccaagcaacccatttaccagaggtgagcttagtgtggcgataagcaatgtggaggctcccggtggaaga  9680100                                       <-------GAMYB                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                    --------->ARR11(3)                                    --------->ARR14(2)                                    <---------ARR14(2)                --------->ARR11(3)                            ---------->DOF2                     <---------ANAC46                         --------->ANAC58                       <---------ANAC58                         --------->ANAC58          ---------->DOF2    <---------ARR11(3) ------->ANAC58==============================HOX2a_HOX2a        <---------ANAC58 ------->ANAC58=============================HOX2a_HOX2a    <-----------RAV1(1) ----HSFB2a(1) <------ZmHOX2a(1)    <---------ARR11(3) --------->ARR11(3)                       -----   ctcgtaagtgtaatggaggaaggaatcaagaaaaggaagatcgttgcaagagtcaaagacattgttgctggagaacttgtatttagaacatgtctgagca  9680200                                                         <---------ARR11(3)                    ------                          <------ZmHOX2a(1)              --------->ARR11(3)             ------->TEIL                 --------->CCA1(2)           <---------ARR14(2)            <---------YAB1 --------->YAB1 ---------->DOF2<---------ARR14(2)           --------->ARR14(2)  <---------ICU4      <---------YAB1 ----->DOF2     --------->ARR14(2)          <------ZmHOX2a(1)   --------->ICU4     --------->YAB1   aaggaaagagtagtcatggatatggagaggataagagagagacagaggatttgattcaagaacttcataatggacatatgattactcatgaatcagaagg  9680300                                 <---------CCA1(1)                                <---------ARR11(3)                                --------->ARR11(3)                             <------ZmHOX2a(1)                                              <--------                  <---------REM1(1)                                                    <--------P <--                <---------At4g35610                              <---------AHL20(2)   <-------GAMYB<-       ---------->DOF2    <-----------RAV1(2)---------->DOF2    --------->AHL20(2)--------->ALFIN1<-- ---------->DOF2--------->At4g35610  <---------MYB46(3)      ----------->GT1  ---------->DOF2     <-- ----->GT1    <-----------RAV1(2)<---------RVE1(1)    ---------->DOF2        <------ZmHOX2a(1)<------   ttagaaagaaaaagactcagatgtaagagcaggagatatttgttgaagaaaggagagaaagagagattaaatatgaagaggaaagtggggttagctttgt  9680400    --------->At4g35610    <---------At4g35610 *TSS                                                                             <---------MYB52(1) --DOF2                                                               <---------ARR11(3) ----MYB46(1)                    <----------DOF2                      --------->ARR11(3) ------GAMYB        --------->YAB1                      <---------ANAC58         <-------GAMYB ----MYB83         <------ZmHOX2a(2)                    <---------ANAC58 <----------DOF2            < -------MYB46(3)  <---------ARR11(3)                  <---------YAB1  <---------AHL20(1)         >>>> -----RAV1(1)     --------->ARR11(3)               <---------ATHB51  <---------CCA1(2) <---------AHL20(2)   tggttaagctgtctaatagagatcataacgtttctcttttgttatatgatcaaattatgcttaccttgctaatatctttttgctgttattttttttgttc  9680500                                                                                             --------                                                                                    <--------ATHB1                                                                                    <---------ICU4                                                                                    ---------->DOF2                                                            --------->ATHB51        --------->YAB1                                                            <--------HAHB4         <---------ATHB12                                                            <---------ICU4         --------->ICU4                                                           <---------YAB1          <---------ATHB51       <---------ARR14(2)                         <-----------RAV1(1)            --------->YAB1   --------->REM1(2)                            --------->YAB1       --------->ANAC58        --------  --------->ALFIN1                             <---------ATHB51      --------->ANAC58        -------- ---------ANAC46  <----------DOF2            --------->YAB1--------->ICU4--------->GLK1(1) <-------GAMYB >>>ZML2--------->GLK1(2) --------->YAB1  ----------->RAV1(1) <---------YAB1  ----------->RAV1(1)   tagtgtgtagaacctgttttctttattagcataagtgtgtgatgcaacaataatgtggctcattattacacaaggaaatgcaacaataatgctcgttgac  9680600                                                                                    <---------MYB59                                                                           --------->YAB1                                                                          <---------YAB1                                                                         <---------AHL20(2)                                                                        <---------ICU4                                                                        --------->YAB1------>MYB83                                                                       <---------YAB1 ------>MYB46(1)                                                                 ----------->GT1    --------->TOE2(3)                                                           --------->AHL20(2)      ==================                                                           <---------AHL20(2)      ----------------->AGL3                                                       --------->AHL20(2)--------->AHL20(2)                                                       <---------AHL20(2)--------->AHL20(1)<---------YAB1       <---------MYB52(1)                              <---------YAB1  <---------------AGL15      ---  --------->YAB1                  ------>MYB83    <---------ARR11(3)   --------------->AGL15  <------ZmHOX2a(2) ->WRKY12            --------->AHL20(2)           <---------ARR14(2)  ===============================MADS_MADS ->WRKY45     ----------->GT1     ------>MYB46(1) --------->ARR14(2)  <-----------------AGL3 -------- ->WRKY38(1) <---------TOE2(3)  <---------MYB59  <------ZmHOX2a(1) <--------P --------->YAB1 <-------   ttaatcacagttattcaggtaaaaaaaatgagaaccaaacttgtttacagaggatatataattaatcgggttaattataatggtaacctaattaagatca  9680700        ----------->HVH21       <-----------HVH21   --------->MYB52(1)   -------->P  ------->GAMYB                           --------->ARR14(2)  --------->MYB55(1)                      <---------GLK1(2) <---------MYB111(2)        <----------DOF2 <---------MYB52(2)   ----------->RAV1(2) <---------ARR14(2)                                     ---- <---------MYB55(2)   <---------ANAC58   ------>MYB46(1)     ----------->GT1      <---------ANAC58 --------->MYB46(3)   <---------ANAC58   ------>MYB83--------->ICU4               <---------ANAC58 ==========================================================================================MADS_MADS ------>MYB46(3)<-----------HVH21      <---------MYB59  <---------YAB1           <---------MYB46(3) - ->ARR11(3)  ----------->RAV1(2)    <-----------GT1--------->YAB1           <---------YAB1       <--- --ARR11(3)<---------ALFIN1 --------------------->WRI1<---------ICU4     <-----------------AGL3  ----   acaacaaccggtcacacctgtctcgcctgcctttgtatataccaaattctctctcattatgagtagtatatcacaactactattgggtagcatcttcaac  9680800             -------->HAHB4             <--------ATHB1             --------->ATHB12             --------->ATHB51             <---------ICU4            <---------AHL20(2)            <---------ATHB51        --------->AHL20(2)      ----------->GT1 --------->DAG2 ----->TOE1(3)                                    <-----------RAV1(1) --------->DOF2                             <---------AHL20(2)             <-------MYC3 ------MYB59--------->AHL20(2)          <------MYB46(1)            --------->TOE2(3) ----->TOE2(3) <---------WOX13(1)       <------MYB83     <----------DOF2   ------->MYC3   ctaaaagtaagtaaataattgatatttagagcttaatttgtttggttttattgtgttgtcttttacttacattaacatgtggaacaatagatagattaga  9680900  Previous    Next  AGI:  At4g17280.1    Description:  auxin-responsive family protein. similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G47530.1); similar to hypothetical protein 31.t00023 [Brassica oleracea] (GB:ABD65115.1); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane (InterPro:IPR006593); contains InterPro domain Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613); contains InterPro domain DOMON related (InterPro:IPR005018) Range:  from: 9678638    to: 9680401    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version