Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------ZAT18                  --------->ZAT18              <---------MYB46(3)            <-------GAMYB           <---------DEAR3(2)                                     ---------->DOF2                   -       <-----------RAV1(1)                                    --------->ANAC58                      <     <----------DOF2                                          --------->ANAC58                      < -->YAB1   <---------MYB46(3)      ---------->DOF2  <----------DOF2            --------->HSFB2a(2)  - --ATHB12 <---------DREB2C(2)     --------->YAB1   <---------ANAC58            <---------HSFB2a(2) <- --ATHB51 <---------At1g77200    <---------YAB1    <---------ANAC58 <-----------ARR10      ------>ZmHOX2a(2)   aagtttcctttgtcggttgatgcactagtcaaactatcaaagtcgtcaagtttgctttgttgacaaggcaaagctactcttccaaaacattgatccattc  9673600                                        <---------AHL20(2)                                        <--------ATHB1                                        --------->ATHB51                                        <---------ICU4                                        --------->AHL20(2)                                       <---------ATHB51                                         <----                                       --------->ICU4                                          <----- -------->HSFC1(1)                   --------->YAB1                                            <----- ---------HSFB2a(2)               --------->ANAC58--------->ANAC58                    --------->HSFB2a(2) ---------HSFC1(1)                --------->ANAC58--------->ANAC46                    <---------HSFB2a(2) -------->HSFB2a(2)               --------->ANAC46--------->ANAC58        <----------DOF2    <------- --------LBD16             --------->AtMYB61 <-----------GT1      ---------->DOF2 --------->GLK1(1)   ttctggaaatttgcaataacgtctcaagaccaatgcaagtaataatttaaccatgccatgttatcaacaaaagctgcttctctgatttctagagtattat  9673700        --------->ATHB12        <---------ICU4          <---------ICU4        --------->ATHB51        --------->ATHB51        -------->ATHB1          --------->ATHB12                                             ------>ZmHOX2a(1)       --------->ICU4          <---------YAB1                                          <---------At4g35610     <---------ICU4         --------------->AGL15                                      --------->At4g35610  <-----------GT1           <---------YAB1                                          <---------At4g35610 -----YAB1              --------->GLK1(1)                                           --------->At4g35610 ----AHL20(1)           <---------GLK1(1)                                          --------->ALFIN1 - ----AHL20(2)          <---------ARR11(3)       <-----------GT1                   --------->ZAT14  <- --YAB1<---------YAB1  --------->ARR11(3)  ----------->GT1<---------ANAC46        <---------ZAT14  --   tttttaaccattattgaagtttgaagatttcttattattgctaaatggtaaaaccatcttgaggggaacaatttgataaaactgtgtgctgcttcctgtc  9673800                                                                                      --------->YAB1                                                                                      --------->ATHB12                                 ------>MYB83                                         <--------HAHB4                                 ------>MYB46(1)                                      <---------ICU4                               <---------MYB59                                       --------->ICU4                         <-------TEIL                                                <---------YAB1                        --------->ARR14(1)                                           <---------ATHB12                       --------->ARR11(1)                                          --------->YAB1   --------->AtMYB61   <---------ARR14(2)                          <-------TEIL   <---------AHL20(2) ----->NtERF2          <---------GLK1(2)                   <---------ATHB12    --------->AHL20(2) --------ETT(1)        --------->ARR14(2)         <---------------AtSPL8      <---------ATHB12 ------ ------->DEAR3(1)    ----------->ARR10            --------------->AtSPL8      --------->AHL20(2)   tccgaccaaaacatgtttaaaattagattcggaccaaacaagttgtcaatttttagtacaaatcaaaggttcaaatgtcaataaataatcattacatttt  9673900                                                                              --------->ZAT18                                                                              <---------ZAT18                                                                          <---------------AtSPL8                       ----------->GT1           --------->YAB1           --------------->AtSPL8-----               <------ZmHOX2a(1)         ---------->DOF2               --------->AHL20(2)       <----           ---------->DOF2           --------->DAG2                   ----------->TBP       <-------- --->AHL20(2) <----------ID1        ---------->DOF2          --------->ARR14(2)          ----------->HVH21   aaaatttcgaaataaaaggacaaacatgtaaaaaccaaaaaagtgaagcactgatatttgtcatttctgcctataaaatgtacacttcccactcacacgg  9674000          <---------ARR14(2)          --------->ARR14(2)                                                                       ==    *TSS ------>MYB83                                                                      <---------MYB46(3) ---->At5g28300                                                                 ------->TEIL<-------GAMYB -------HVH21     >>>>>>>>>TBF1 --------->YAB1                               --------->ANAC58      == -ALFIN1 ------>MYB46(1)      --------->GLK1(2)                              --------->ANAC58      <-   tcacagaaaccaaattcgaagaagaaacagagaatcatcaaatcaaatccctaaaaattgatttttgaaatggagaagaacgcatcgacttcgtcgttga  9674100                                  <---------DAG2                           --------->MYB46(3)                          -------->P                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                         ------>ZmHOX2a(1)                     <---------AGP1<----------DOF2            --------->HSFC1(2)                     --------->AGP1<---------DAG2             <---------HSFC1(2)                     --------->ARR11(3)                       --------->HSFB2a(1)                  <---------HSFB2a(2)                        <------ZmHOX2a(2)              --------->ZAT18   ------>NtERF2               <---------ARR14(2)           ---------->DOF2             <---------AtMYB61 --------->DEAR3(1)           --------->ARR14(2)        ------->TEIL     <---------ANAC58<-----------ARR10               <---------ALFIN1           --------->TOE2(2)     <---------ANAC58<---------ARR11(3)         =======================HOX2a_HOX2a  <---------SPL7 =============================HOX2a_HOX2a       <------ZmHOX2a(2)               --------->DEAR3(1) ============================HOX2a_HOX2a       <---------ARR14(2)              --------->DEAR3(2)   < -----ZmHOX2a(1)  --------->HSFB2a(2)          --------->ARR14(2)              --------->MYB46(3) <--   aggacttgggtccgagtggtctagatctaaccagcgcctttttcaaaccgatccacaactccgatccttctctcccttcaaaccgacgtaccaaagtctc  9674200                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     --------->ARR14(3)                                                     --------->ARR11(3)                                                     <---------ARR14(3)           ------>NtERF2                                                     <---------ARR11(3)          <----------ID1                                                     <---------AGP1              --------->ANAC58                                                     <---------ARR14(2)          --------->ANAC58                --------->TOE1(2)              --------->ANAC58                  --------->ANAC46              --------->HSFC1(2)               --------->ANAC46                <---------DOF5.7(2)              <---------HSFC1(2)               --------->ANAC58      ------>ZmHOX2a(2)             <---------DOF5.7(2)            ===============================HOX2a_HOX2a            --------->ARR14(2)              ==================HOX2a_HOX2a     ----------->HVH21     <            <---------ARR14(2)              =================HOX2a_HOX2a      --------->WRKY12      <     <------NtERF2                          ------>ZmHOX2a(1)       <------ZmHOX2a(2)               <   <---------DEAR3(1)                       ================================HOX2a_HOX2a         -----  <------NtERF2--------->O2              ------>MYB46(1)           <---------ARR11(3) <---------ALFIN1 ---------DEAR3(1)                       ------>MYB83--------->ARR14(2)      --------->DOF5.7(2)<---- ---------HVH21<---------O2           --------->MYB46(3)    --------->DEAR3(1)--------->WRKY38(1)  <-   cgtcgtcggagtcggaaacgtcggaatggccatagctcaaaccatcctcactcaagatctcgcagacgagatcgctctcgttgacgccaaacccgataag  9674300                                                                                              -------                              ------>NtERF2                                                   <------                              <---------At4g35610                                          ------>ZmHOX2a(2)                              --------->At4g35610                                         <---------At4g35610                          --------->ANAC58                                               --------->ARR14(2)            <---------ANAC58 <---------DEAR3(1)                    <---------MYB52(1)    <---------ARR11(3)    <------NtERF2         --------->ANAC58                        <-------GAMYB          <---------ARR14(2) ---------ANAC58          --------->ANAC46             <------ZmHOX2a(2)                 <---------AGP1 ---------ANAC58        <---------ALFIN1------>ZmHOX2a(1)<---------At5g28300       --------->DEAR3(1) ---------ANAC46  =============================HOX2a_HOX2a       <-----------RAV1(1)--------->At4g35610 ---->HSFC1(2)    ------>ZmHOX2a(2)     ======================HOX2a_HOX2a        <---------At5g28300 -----HSFC1(2)  <---------ARR11(3) <----------DOF2    <---------ARR11(3)       ----------->HVH21 <--- ------TEIL <---------ANAC58 --------->DEAR3(1)       --------->ARR11(3)      <-----------HVH21 -----   cttcgtggcgaaatgcttgatctccaacacgccgctgctttcctccctcgaactaagatcaccgcttctgttgattacgaagtcaccgctggatctgatc  9674400           --------->ZAT2           ----------->RAV1(2)           <---------At4g35610    <---------ANAC58           <---------ZAT2         <---------ANAC58          ================================RAV                 <---------ARR14(2)          <-----------RAV1(1) <-----------RAV1(2)             --------->ARR14(2)           ------>ZmHOX2a(1)     <-----------HVH21     <---------ARR14(2)                <------ZmHOX2a(1)      <---------YAB1     <-----------TGA1      --------->ARR14(2)             <---------At4g35610     <---------CCA1(2) -->ARR11(3)               --------->GLK1(2)              --------->At4g35610  <---------MYB52(1) ---ARR11(3)              <---------GLK1(2)             <-----------RAV1(2)   <-----------HVH21  ---- -------DOF2 <-----------RAV1(1)--------->ANAC46     <---------ANAC58         --------->LBD16<------- ->ZmHOX2a(2)=============================RAV        <---------ANAC58        --------->ANAC55(2) ----   tttgtatcgtcactgctggtgctagacagaatccaggcgagtctagactcaatttgcttcagaggaacgtcgctctcttccgtcatatcattcctccact  9674500  Previous    Next  AGI:  At4g17260.1    Description:  L-lactate dehydrogenase, putative. similar to PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2), malate dehydrogenase [Arabidopsis thaliana] (TAIR:AT5G09660.1); similar to PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1), malate dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G22780.1); similar to PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2) [Arabidopsis thaliana] (TAIR:AT5G09660.2); similar to L-lactate dehydrogenase, putative [Brassica oleracea] (GB:ABD65114.1); contains InterPro domain Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal; (InterPro:IPR015955); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236 Range:  from: 9674004    to: 9675461    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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