Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <-----------GT1            <---------AHL20(1)            <--------ATHB1            <---------ICU4                                                                  ---------            <---------AHL20(2)                                                      <---------YAB1            --------->YAB1                                                        <---------ICU4         --------->YAB1                                                          --------->ICU4        <---------AHL20(2)                                                     <---------ICU4       <---------AHL20(2)        <---------TOE1(3)                        <---------YAB1    <--------       --------->AHL20(2)<---------DAG2                          <---------TOE2(3)--------->YAB1  <-- ----->AHL20(2) <---------------AtSPL8                          ---------->DOF2--------->YAB1  ------ ------AHL20(2) --------------->AtSPL8                        <---------YAB1  <---------AHL20(2)<---- -ARR11(3)  --------->AHL20(2)   <---------TOE2(3)         <---------YAB1 <XXXXXXXXXXXXXXXXXXXXMIR867 >ARR11(3) --------->ICU4<----------DOF2  <---------YAB1   <---------AHL20(2) --------->AHL20(2)-----   tatttgttttttaataattttgtactactttatttatggtttttcttattagttttttttttttattaaagtttttcttattaattatgtttaaaaaatt  9637800             --------->YAB1         <---------YAB1        --------->AHL20(2)        <---------AHL20(2)        --------->AHL20(1)       <---------ICU4       --------->YAB1      <---------YAB1   --------->AHL20(2)                                                           <----------DOF2   <---------AHL20(2)                                                          ------>ZmHOX2a(2)  --------->AHL20(2)                                                         --------->ARR11(3) >AHL20(2)   --------->AHL20(2)                                              <---------ARR11(3) -AHL20(2)--------->YAB1                                            -------->ATHB1 -------TOE2(3)          <---------ZAT18         ----------->GT1    <---------ICU4 --->AHL20(2)<---------AHL20(2)                 ------->TEIL        --------->ATHB12 -----AHL20(2)   --------->AHL20(2)   --------->ATHB12             <---------YAB1 <---------AHL20(2) ---->AHL20(2)   <---------AHL20(2)  <---------YAB1            --------->AHL20(2) --------->AHL20(2)-   aatatttaattataataatataaattttgcacttagatggtcattggatgtatgtaaaaaaaaaaaaaaatcattggatgatctttaaatttgtatgttt  9637900                            <-----------GT1                     <---------AHL20(2)                     --------->AHL20(2)  --------->LBD16                 <---------AHL20(2)     --------->ANAC46             <---------YAB1<---------AHL20(2)            <---------AHL20(1)          --------->ANAC58            --------->AHL20(1)         --------------->AGL15                    <----------DOF2            --------->AHL20(2)    <-----------HVH21                          <---------TOE1(3)            <---------AHL20(2) <---------ICU4                        <---------CCA1(1)           --------->YAB1  --------->AHL20(2) ----------->GT1        <---------RVE1(1)           --------->AHL20(2)<-----------GT1---------->DOF2         --------->ARR11(3)        <---------ICU4<---------AHL20(2)--------->ANAC58            <---------ARR11(3) <-----------HVH21 --------->ID1   --------->AHL20(2) <-----------GT1                <<<<<<<<<RAP2.2    --------->ANAC46   ttgttgttaaccattatatttattttaatttaaacatttcacccgtaaaagttaaaagtttatgtttttagatatttttaagctttacaggtcagtctat  9638000              --------->At4g35610              <---------At4g35610              <---------ZAT2              --------->ZAT2                                       <---------ANAC58            <---------ZAT14                                        <---------ANAC58            --------->ZAT18                                     <---------GLK1(1)     ------>NtERF2                                              --------->GLK1(1)    <---------ZAT14 --------->ANAC58                                              <---------ARR11(3)--------->YAB1 --------->ANAC58                --------->At4g35610   --------->DAG2           <---------ATHB12 --------->ANAC46       ---------->DOF2              ---------->DOF2        --------->ZAT18        <-   atcaggccacctagtgagctggagaagaaaggaacagcaaactcagaatgaactaaaaaggtcgagatttcttgatagcgcaatgaccacacagaccaga  9638100                                                                --------->At4g35610                                                                --------->CCA1(2)                                                                <------ZmHOX2a(2)                                                               <---------AGP1                                                               --------->ARR11(3)                                                               <---------ARR11(3)                                                               <---------ARR14(2)                    --------->AHL20(1)                         --------->ARR14(2)                    <---------AHL20(1)                <---------ALFIN1              ----------->GT1                         --------->AtMYB61             ----------->GT1                         --------->MYB46(3)              *TSS            --------->DAG2                          -------->P --------->AGP1       <----------DOF2          ---------->DOF2                          <-----------GT1        <---------YAB1     --------->TOE2(3)                          --------->GLK1(2)      <---------ARR11(3)     --------->TOE1(3)                          <---------ARR14(2)     --------->ARR11(3)    <---------HSFC1(2)                          --------->ARR11(3)     --------->GLK1(2)    --------->HSFC1(2) --------->AHL20(2)       <-----------ARR10------>ZmHOX2a(2) <---------DAG2    <---------HSFB2a(1)<---------AHL20(2)       <---------ARR11(3)     <---------ARR14(2)   ------->TEIL    --------->AHL20(2)           --------->ARR14(2)     --------->ARR14(2) --------------------WRI1                 --------->HSFB2a(2) <---------GLK1(1) <-----------GT1<-----   gttcgaaccttcaaaagggaaatatataatttgtttcttagtttctcgagtatctaccacctcgagatctgaaaatctgattctacctttccattttctt  9638200                                                                                         <-----------HVH21                                                                                      <---------At4g35610                                                                               ------>ZmHOX2a(2)                                                                              --------->CCA1(2)                                                                             --------->AGP1                                                                             --------->ARR14(3)                                                                             <-----------ARR10                                                                             <---------AGP1                                                                             <---------ARR11(3)                                                                             <---------ARR14(3)             <----------DOF2                                                 <---------ARR14(2)            <---------ANAC58                                  --------->WRKY12<------ZmHOX2a(2)            <---------ANAC46                              ===========================HOX2a_HOX2a       <---------ANAC58         ------>ZmHOX2a(1)         ------>ZmHOX2a(1)  --------->ARR14(2)     -       <---------ANAC58      <-----------GT1              ============================HOX2a_HOX2a<---  ---------->DOF2            ---------->ID1<---------At4g35610<---------ZAT18--------->ARR11(3)  ---- -----DOF2  <---------ANAC58<-----------GT1--------->At4g35610--------->WRKY38(1)     --------->At4g35610   tctcaaaagtcgtggctttgagaatagttttttcctcttcttctcatcagactcggtttcctagttgactcattttcaagatctgggcatctgtcatttc  9638300                                                   <---------ANAC46                                                   <---------ANAC58                                                   <---------ANAC58                                                <--------P                                               <-------GAMYB                                              <---------MYB46(3)                                           --------->At4g35610                         <----------DOF2                                           --------->ZAT2               <---------ANAC58                                           <---------ZAT2   <------MYB46(1)           <---------ANAC58                         ---------->ID1    <---------At4g35610         <---------MYB46(3)       -----         <----------DOF2<-----------GT1 --------->ZAT2     --------->MYB59        <---------ANAC58  -    ---------->DOF2    <-----------GT1  <---------ZAT2    <--------P  <---------ANAC46<---------ANAC58 -------->YAB1     <---------AHL20(2)   <---------At4g35610<---------TOE1(2)<------NtERF2    -------- -------DOF2 <----------DOF2 <----------DOF2<---------ANAC46<------MYB83<---------ANAC58     <------- ----->TOE2(3)    <---------AHL20(2)    --------->At4g35610--------->MYB111(1)    <---------ANAC58 --   tttaataaaagctttctttttttatttatcccttttgttttcagctgctggttgcttgtagtaggtatagttttgggtggccttacttgcttttcagcaa  9638400                                                       --------->GLK1(1)                                                  <---------LBD16                                               --------->GLK1(1)                                               <---------GLK1(1)                                               <------ZmHOX2a(2)                                               <---------At4g35610                                               --------->At4g35610                                              <---------ARR14(2)                                              --------->ARR14(2)                    --------->ANAC58                                              <-----------ARR10                     --------->ANAC58 ----->DOF2<---------TOE2(3)                  <---------ARR11(3)                  ---------->DOF2 -------->TOE1(2)     <<<<<<<<<TBF1           --------->ARR11(3)    <---------AHL20(2)        <------ ->At4g35610       <<<<<<<<<TBF1          <---------------ANT      <---------AHL20(2)         <------ --At4g35610  <---------GLK1(1)         <----------DOF2<---------CCA1(2)       <---------HSFB2a(2)<-- ------->ZAT2 --------->GLK1(1)  <----------DOF2------>ZmHOX2a(2)  --------->AHL20(2) --------->YAB1   aagctgggagattgagatttcttcttcttctctctctttagtctttgggatctgcgcatttctcagaaattatatgggactctcgaaagcatgatgcttt  9638500                                 <---------At4g35610                                 --------->At4g35610                            --------->At4g35610                             <-----------RAV1(1)                                <---------At4g35610                           <----------DOF2                                --------->ATHB12 ----DOF2             <---------HSFB2a(2)      --------->ANAC46          <---------YAB1 ---DAG2              --------->HSFB2a(2)      --------->ANAC58          --------->ICU4 ---------RAV1(1)    <---------LBD16           --------->ANAC58       <-------TEIL   ttgttgtctcacttgtaatttgttcgggactttgttgctgaagaaaactaagcaatgtctgtagaaacatggttcatgattcagaagactactactagct  9638600                                                                           <---------ALFIN1                             <---------WOX13(1)                     <-------TEIL    --------->ZAT18        --------->ATHB12                     <---------TOE2(2)         <----------DOF2    <---------ZAT14       <---------YAB1                        <---------TOE1(2)     <---------At4g35610    --------->ZAT14    <---------TOE2(3)      <----------DOF2  ------>ZmHOX2a(1)  <----------DOF2   catgagttcactggtacttggaattaagatgattgatcagttcatcaactttgtaattcgacctcctaggtacttctccaccctctttagctctttcaag  9638700  Previous    Next  AGI:  At4g17150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23689.1); contains domain PTHR12277:SF9 (PTHR12277:SF9); contains domain PTHR12277 (PTHR12277); contains domain SSF53474 (SSF53474); contains domain G3DSA:3.40.50.1820 (G3DSA:3.40.50.1820) Range:  from: 9638185    to: 9641767    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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