Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 ------>MYB46(1)       --------->ANAC46     --------->ANAC58     --------->ANAC58    <---------ZAT18    --------->ZAT14  --------->At4g35610  <---------At4g35610  --------->ZAT14 -------->ANAC46-------->P                                                           <---------LBD16 ------>YAB1   ------>MYB83                                                        <---------ARR14(2) ------ATHB12  --------->MYB52(1)                                                  --------->ARR14(2) --->WOX13(1)<---------MYB59                                            --------->TOE2(3)        ---- ->WRKY18(1) --------->AtMYB61<-------TEIL                              <----------DOF2--------->LBD16   tcacagcacacaaaacctaaccagttctcacattcgttcacaactcaaaatcgctactcaatagcacatttgaactttaaactcaaatccggacattaca  9636500                                                          ------>ZmHOX2a(1)                                                         --------->TOE2(3)                                                    --------->At4g35610                                                   --------->ARR11(3)                                                   <---------ARR11(3)                 --------->ANAC58                                             ====================HOX2a_HOX2a          --------->ANAC58                                             ------>ZmHOX2a(2)                     --------->LBD16        ----------->GT1   <-----------GT1  --------->ARR11(3)                     <---------HSFB2a(2) ----->ANAC46  ----------->GT1             <---------ARR11(3)          ----------->HVH21 ------->TEIL   caaaatcagcgagaaaatagaaacaatctaaccttgccaaacactgatcttaagagcttccttattcaatcccctcacatagttccccaagtacctttgt  9636600                ------>ZmHOX2a(2)              --------->ARR11(3)              --------->ARR14(2)              <---------ARR11(3)                               ----------->GT1          ----------->RAV1(2)                                  <----------ID1         --------->MYB52(1)                             --------->At5g28300         -------->P                                    <---------------AGL15      --------->At4g35610                              --------------->AGL15      <---------At4g35610                             <-----------------AG                 --------->TOE1(2)     --------->ANAC58                                 <-----------------AGL1           --------->YAB1     --------->ANAC58                          <---------GLK1(2)                       <---------ICU4 --------->ANAC58       --------->ARR11(3) --------->YAB1     ----------->GT1         <---------ATHB12 --------->ANAC58       <---------ARR11(3)<---------ATHB12 ---------->DOF2 ----------->GT1--------->YAB1   aacaagtaagctacctgatcttccaacatctttgaactctgcaaatcaaaattctcaccgtaaaagggaaaaaacaaatgtaaaatcaataatcgtgaga  9636700                                                                                                  <--                                                                                                <----                                                                           ------>ZmHOX2a(1)   <-----                                                                          --------->TOE2(3)   <------                                                                    ==============HOX2a_HOX2a <------                                                                    ------>ZmHOX2a(2)         -------                                                                  --------->ARR14(2)--------->ANAC58                                                                  <---------ARR14(2)--------->ANAC55(1)                                                     ======================HOX2a_HOX2a       <-------                                          --------->ANAC58        <---------ARR11(3)--------->ANAC58                                          --------->ANAC58        --------->ARR11(3)--------->ANAC46                                        --------->MYB52(1)       <------ZmHOX2a(1) --------->ZAT18<--                               =============================HOX2a_HOX2a--------->ARR14(2)    <-------             ---------->DOF2   ------>ZmHOX2a(2)     <------ZmHOX2a(1) <---------ARR14(2)  ----------   agagaatgaaattctcaaagagttcgatttcgatcggactagaaacggaatcgaaggagaggcatgaggatcgtttcctcaagagcacgcaagaggcggt  9636800                                                                                ----------->HVH21                                                                                ----------->TGA1                                                                           <-------GAMYB           <-   ----------->GT1                                                        <---------MYB46(3)      --- <---------GLK1(1)                                                      <---------At4g35610       <-- ----MYB46(1)                                                           --------->At4g35610   <------ ----P                                                                 <-----------RAV1(1)  <-------- --GAMYB                   <---------bZIP60(2)                      --------->ARR14(2)      --------- ---MYB46(3)               <---------ANAC58                         <---------ARR11(3)      --------- ---DEAR3(2)               <---------ANAC46                         --------->ARR11(3)      <-------- -->MYB55(2)               <---------ANAC58                         <---------ARR14(2) --------->ZAT14 --DEAR3(1)             <---------ATHB12                           --------->CCA1(1)   <---------ZAT14 ----MYB83      <---------YAB1                                 <---------AHL20(2)  <---------DEAR3(1) --RAP2.6(2)  --------->YAB1              <---------RAP2.6(2)  --------->AHL20(2)  <---------DREB2C(2) -->AtMYB77   <---------ICU4 --------->ALFIN1       ---------->DOF2--------->RVE1(1)*TSS <---------ANAC46   tggaaatgtgaaatagtcatgactcaatgacttgggggagagtttcggctctgtaaaaggaatataaaaatatctgctgttgatgacggtgcagtgcagt  9636900      --------->ALFIN1                                                                            --- ------GAMYB                                  ----------->GT1                            <---------TOE2(3) ------>ALFIN1                                <----------ID1                           <---------AHL20(2) ---------RAV1(1)                           ---------->DOF2                        --------->AHL20(2) ---ANAC46              <---------DDF1    <---------AHL20(2)                       <---------AHL20(2) -ZAT18                <---------ETT(2)  --------->AHL20(2)        --------->ZAT14<---------AHL20(1) >ZAT18                --------->ETT(2) <---------YAB1         --------->MYB52(1) --------->AHL20(1) >ZAT14           <------------CBF   <---------YAB1        <---------ICU4         --------->AHL20(2)< -ZAT14        ------------>CBF  <----------DOF2          <---------ATHB12        <---------AHL20(2)-   gtgttgctgtgttgtttatcaattgtcgacataaactttattattaaaaagaaaaaactaatcagtaactgaactaaaccaaaatttaattaagtttcaa  9637000                                                                 <---------MYB59                                                               ------>NtERF2                                                              --------->DEAR3(1)                                                           --------->ANAC46                                                           --------->ANAC58      <-----------GT1                                      --------->ANAC58 --------->AHL20(2)                                    <---------GLK1(1)                  ------->GAMYB --------->AHL20(1)                                    --------->GLK1(1)                -------->P <---------AHL20(2)                                   <-----------ARR10              <---------MYB52(2) ------>YAB1--------->ALFIN1           --------->WOX13(1)<-----------GT1     <---------AHL20(2) ---------AHL20(2)                 <-----------GT1    --------->ARR14(2)    <---------WOX13(1) -------->AHL20(2)      ------>ZmHOX2a(1)             <---------ARR14(2) <---------YAB1--------->MYB52(1)   aaataatttaaccggtggagaaattcctataccatataaaccaattagataaatcggatttacgcagcctaatttttgattaatcgaactaaccgaaatt  9637100                                                                       ------>MYB83                                                                       ------>MYB46(1)                                                                     ------->GAMYB             <-----                                                                    --------->MYB46(3)   --------->TOE2(3)                                                           <---------AHL20(2)            --------->YAB1                ----------->GT1                            --------->AHL20(2)            ------->GAMYB     <---------ARR11(3)                   --------->AHL20(2)      <-----------GT1       --------->MYB46(3)     --------->ARR11(3)                 --------------->AGL15  --------->YAB1          -------->P     --------->AHL20(1)          --------->DAG2           <---------AHL20(2)          --------->WOX13(1)     <---------AHL20(1)         ---------->DOF2           --------->AHL20(2) --------->GLK1(2) ------   actaaaatatatcatttctagttaaacatatacaaaaagtttcttaaaatatgaagttttttaaattataaccaactaaaatctgaatcaaccaaaatta  9637200                                                                     --------->ATHB12                       --------->AHL20(2)                       ------->TEIL        <----------DOF2                      <---------WOX13(1)                   --------->YAB1         <xxxxxxxxxxxxxxxxxx                   --------->AHL20(2)                  <---------AHL20(2)        --------->ANAC46                   <---------AHL20(2)                  --------->AHL20(1)<------MYB83      --------->ANAC58                  --------->AHL20(2)                --------->AHL20(2) <---------WOX13(1)  --------->ANAC46       <---------ANAC55(2)                          --------->YAB1  <---------YAB1--------->LBD16       --------->ANAC55(2)            <---------ANAC46 <---------AHL20(1)<------MYB46(1)   --------->ANAC58 ----AHL20(2)     <---------AHL20(2)  <---------ANAC55(2)--------->ARR11(3)     <---------LBD16 --->AHL20(2)------>ZmHOX2a(2)  xxxxxxxxxxxxxxxx>smallRNA(i) <---------YAB1    <-----------GT1   tatacaaataggtgatcgaatttaattgaatagacgaattatgtgaagttgctataatatatcatgaattttgattggtttttccgctataactcgcaaa  9637300                                                                  --------->ANAC58                                                             <-----------GT1                                                       <---------AHL20(2)                                                       --------->AHL20(1)                                                      --------->AHL20(2)                                                      <---------AHL20(2)                          <xx                                                     <---------AHL20(2)                           <--                                                     <---------AHL20(1)                           ---                                                     --------->AHL20(2)                           ---                                                  --------->AHL20(2)                              <--                                                 --------->AHL20(2)<---------ATHB12              xxxx               <---------MYB46(3)              <----------DOF2    --------->ANAC46      --------->ARR11(3)           <---------YAB1                      --------->TOE2(3)  --------->ANAC58      <---------ARR11(3)      --------->ATHB12                      <-----------GT1  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxx xxxxxsmallRNA(se3)      --------->AHL20(2) <---------AHL20(2)  <---------ALFIN1       <---------GLK1(2)   cttgtgaacgattgcgattgttagcatttaaaacatatttagaaatttactttaaattattttgcaccactcaatatcgctaaatttcaaaatctcattt  9637400  Previous    Next  AGI:  At4g17140.1    Description:  pleckstrin homology (PH) domain-containing protein. similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G48090.2); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G48090.1); similar to hypothetical protein OsJ_031217 [Oryza sativa (japonica cultivar-group)] (GB:EAZ17008.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63490.1); similar to hypothetical protein OsI_033513 [Oryza sativa (indica cultivar-group)] (GB:EAY79554.1); contains InterPro domain Pleckstrin-like (InterPro:IPR001849); contains InterPro domain Pleckstrin homology-type (InterPro:IPR011993) Range:  from: 9613342    to: 9636884    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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