Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <------ZmHOX2a(2)                                     <---------ARR11(3)                                     --------->ARR14(2)                               --------->SPL7                              --------->ALFIN1                             <---------SPL7                            <---------ANAC46                            <---------ANAC58              ------>ZmHOX2a(2)     ------->PIF5                            <---------ANAC58       --------->ARR14(2)           --------->TOE2(2)                           <------NtERF2           <---------ARR14(2)           --------->TOE1(2)                          ------>NtERF2            --------->GLK1(2)            <-------PIF5                         --------->DEAR3(1)    --------->LBD16         --------->LBD16                         <---------DEAR3(1)   --------->ANAC46       <---------LBD16                        <------NtERF2--------->ARR11(3) <---------ARR14(2)     --------->ZAT2                        --------->ATERF1(1)  <---------LBD16      ------>ZmHOX2a(1)                       <---------ATERF1(1)   --------->LBD16------>ZmHOX2a(1)  <---------ZAT2                       ------>NtERF2 <---------ARR14(2) --------->ARR14(2)     ----------->RAV1(2)  -                      ----------->HVH21  ========================HOX2a_HOX2a--------->MYB46(3)      <                      <---------ETT(2)===================================HOX2a_HOX2a             ----                      --------->ETT(2)=============================HOX2a_HOX2a--------->MYB52(1)<----                      <---------DEAR3(1) ------>ZmHOX2a(1)===============HOX2a_HOX2a            <----               --------->GLK1(1)   ----------->ARR10  <---------YAB1--------->MYB52(1)          ----- ----------GT1 <---------GLK1(1)----------->HVH21 <---------GLK1(2)<---------ALFIN1----------->HVH21<   ttgacttcttacctctgaattctggcgacggcgtgcgacgatcctcccgcgcgattctgatcctcttcctcaccggaaaccacctgcgaccatgtccaga  9612300          --------->GLK1(2)      >>>>>>>>>TBF1 --------->LBD16                            --------->AHL20(2) -------->HSFB2a(2)             --------->RVE1(1) ---------HSFC1(1)             --------->ARR11(3)                                           --------- ----->GLK1(2)                 <---------ARR11(3)                                   <---------SPL7 -----GLK1(2)                  --------->GLK1(2)--------->AHL20(2)                <---------------AtSPL3 -----ARR14(2)                <---------GLK1(2)--------->AHL20(2)                 <---------------AtSPL8 ---->ARR14(2)   ----------->RAV1(1)       --------->AHL20(2)                  <---------TOE2(3) ---------HSFB2a(2) ------->GAMYB        --------->YAB1                  <------ZmHOX2a(1)------->TEIL   ttccagaagaagaatcgttcaacagaaattcaaaatctctcaacaataaataaaaaaaactgataacgcagaagaggaattgatgatgtacgaacattag  9612400                                                                    <---------MYB46(3)                                                                    <------MYB83                                                                    --------->MYB52(2)                                                                    <------MYB46(1)              ------>ZmHOX2a(2)                                    <---------AtMYB61             <---------GLK1(1)                                    <---------MYB52(1)             --------->GLK1(1)                                  <---------DEAR3(1)            <---------AGP1                                      <---------ANAC46            --------->ARR11(3)                                 ------>NtERF2            <---------ARR11(3)                                 <------NtERF2            --------->ARR14(2)                               <---------DEAR3(1)            <---------ARR14(2)                               <------NtERF2                          -        ------>ZmHOX2a(2)                                   --------->At4g35610                     -       --------->CCA1(2)                                    <------NtERF2                     -------       <------ZmHOX2a(2)                       --------->MYB46(3)===============================MYC_MYB      <---------ARR11(3)                     <---------ALFIN1--------->ATERF1(1)       <-----------HVH21      --------->ARR14(2)                    --------->MYB46(3)------>NtERF2           --------->O2---      <---------ARR14(2)               --------->YAB1       --------->LBD16           <---------O2---      <---------AGP1                   <---------ICU4       <---------LBD16           --------->bZIP60(2)      --------->AGP1                --------->YAB1          <---------At4g35610       <---------TGA1a      --------->ARR11(3)            --------->REM1(1)       ------>NtERF2  ------>ZmHOX2a(1)  <------    ----------->ARR10           <---------ANAC58           --------->DEAR3(1)         --------->TGA1a >TOE2(3)  <---------CCA1(2)    <---------ANAC58--------->AtMYB61<-------GAMYB <---------MYB52(1) <--   cccaagtagatctggatctctcgtccctcgagttgccttcatcatcaccaccatcgtctcgccgcggcgttggtttcctccgatagccacgtcgagtcga  9612500                                                                                              <------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                    --------->LBD16                                          <---------CCA1(1)                        <---------HSFB2a(2)                                          <---------RVE1(1)                        --------->HSFB2a(2)                                         --------->ARR11(3)                        --------------->AGL15                                   ---------->DOF2                                ------>ZmHOX2a(2) ----->MYB46(1)                   <------ZmHOX2a(1)                  --------->ALFIN1 --------->ARR14(2) ----->MYB83                ----------->HVH21                      <-----------RAV1(1)<---------ARR14(2) -->WRKY38(1)             ==========================================================================MADS_MADS ------>MYB46(3)          <---------------AGL15          <---------AHL20(2)       ----------------->AGL3 ------>AtMYB61          <-----------------AGL1     <---------YAB1 --------->ALFIN1<---------------AGL15 ---ETT(2) --------->WOX13(1)    XXXXXXXXXXXXXXXXXXXXX>MIR447A/B --------->ALFIN1 ----------------->AGL2 -------MYB59    >>>>>>>>>>>>>>>>>LFY    <---------ARR11(3)---------->DOF2<-------GAMYB     <--------P   ccaaacctctgatcaatccgtccattgtctctaacaggaaagagatattttgttttgatttaaaagagtgtgtgggagttgtgatccagaaatggtagtt  9612600                                                                     --------->ICU4                                                                    <-----------TBP                                                                   *TSS                                                               <---------ANAC55(2)                                                     --------->ARR11(3)         <---------DEAR3(1)                          <---------ARR11(3)         <---------ETT(2)                            <---------GLK1(2)      <---------O2                            <---------ANAC46 --------->ANAC46      --------->O2                         ----------->HVH21   <---------RAP2.6(2) --------->MYB52(1)                        ----------->TGA1    --------->ANAC55(2) -GAMYB  --------->DEAR3(1)              <---------TGA1a      <---------At5g28300   ----------------- --MYB46(3)                              <---------ANAC58    <-----------GT1       <------ZmHOX2a(2) ->MYB111(1)                             --------->TGA1a <---------YAB1<------------CBF           --- ->MYB52(2)                   <-----------GT1 <---------ANAC58--------->RAP2.6(3) --------->ARR14(2) ->MYB55(2)             ------>ZmHOX2a(1)<---------ANAC58<---------AHL20(2)       <---------ARR14(2) ->MYB111(2)     <-----------GT1--------->YAB1<---------ANAC58<---------LBD16<-----------GT1  -------   gaataacgacgtcgacgatttacttcctgttttttcatcacgcgcgtgacgtttagatttttattacggcatttattgtttaccgatccactagtagcac  9612700                           ------->GAMYB                           <---------ETT(1)                           --------->At1g77200                         ------>MYB83                         ------>MYB46(1)                         -------->P                         --------->MYB52(1)     --------->YAB1     ------>ZmHOX2a(1) >AGL3    <------------MYB.PH3(1) ------>ZAT14   <-----------GT1    --------->YAB1       ----------->GT1                       <------ -->ZAT6--------->MYB52(1)--------->DEAR3(2)  ----------->GT1   ---------->DOF2       <-----------GT1   tatgctctcataacggtttttcgctcctaccgacaaataatagttgattcgtaaattttagttaaaaaaagaaggttatggccaaaattgactattcttt  9612800                                           <---------ZAT6                         --------->AHL20(1)               ----------->GT1       <-------TEIL                                 <---------AHL20(1)      <---------AHL20(2)        --------->AHL20(2)                         <---------ARR11(3)<-------    <---------YAB1             <---------AHL20(1)      <----------DOF2     --------->GLK1(2) -------- <---------MYB52(1)            --------->AHL20(1)------->TEIL    --------->YAB1   --------->ARR11(3) ----DOF2    <---------ANAC46 --------->AHL20(2) -------->P   --------->YAB1      <---------AHL20(2)   tcagttattttagtggagggtaatatagagaaatatatatacatagtgatcaacctgctttctataatcaaaaacaaaatctaaaatattgttttctcat  9612900                                                                                --------->DOF5.7(2)                                                                                <---------MYB52(1)                                                                        <-------MYC3                                                                       <---------O2                                                                       --------->ANAC46                                                                       --------->O2                                                                     <---------ALFIN1                                                                    <---------WRKY12                                                         ------>ZmHOX2a(1)    <---------ANAC46                           --------->YAB1      <---------ARR11(3)<---------ANAC58                         ------->TEIL          --------->ARR11(3)<---------ANAC46--------->ZAT14    <-------TEIL      <---------ATHB12        <---------CCA1(2)  <---------ANAC58--------->ARR14(2) --------AGL15--------->WRKY38(1)     <---------CCA1(2) --------->TOE2(3)  ------>NtERF2     -------- ------->AGL15--------->WRKY12      --------->O2       ------>ZmHOX2a(2)------->MYC3        <--------   tttagatgcaagagagttgactcaatgaatcataagactcgtctctgtaaatcttgatcctaaaattccgtccacgcgggccgtttactctcaagatgta  9613000                                                                                  --------->LBD16                                                                                  ------>NtERF2                                                                                 --------->ANAC46                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                                <---------LBD16                                                                            <-------MYC2                                                                            <-------MYC3                                                                            ------->MYC2                                                                            <-------PIF5                                                                            <-------MYC4                                 <----------DOF2                            ------->PIF5                               --------->ZAT18           <---------ANAC58   ------->MYC3                              <---------ANAC46           <---------ANAC58  --------->ANAC58                              <---------ANAC58       <---------AtMYB61     --------->ANAC58--------->MYB52(1)                              <---------ANAC58   --------->ZAT14     <----------DOF2     <---------MYB52(2)                       ---------->DOF2           <---------ZAT18    XXXXXXXXXXXXXXXXXXXX>MIR783  <---                   --------->ANAC58              --------->ZAT18  <---------TOE1(3) ----------->RAV1(1) --->GT1           --------->ANAC58    --------->ARR11(3)<---------ANAC46 <---------TOE1(2)---------- -ARR11(3)   <---------WOX13(1)<---------ZAT18   <---------ZAT14  <---------TOE2(3) <---------ALFIN1   aatttgagcgatgtaattgactcgccaaagtagcgcgttaagctctagtagtgcattggtcgtgtattaagctttgcacgttcccgccacaactaaaggc  9613100                            --------->YAB1                            <--------HAHB4                            <--------ATHB1                            -------->HAHB4                            --------->ATHB51                                               --------->ANAC58                            <---------ICU4                                             <---------ALFIN1                           <---------YAB1                                              --------->AtMYB61                           <---------ATHB51            --------->YAB1                 --------->ANAC58                           --------->ICU4         --------->TOE2(3)                   --------->ANAC58                      --------->ANAC55(2)   ------>MYB83<---------AHL20(2)    <---------ZAT14                <---------ATHB12            ------>MYB46(1)                   --------->REM1(2)               --------->ANAC58             --------->MYB52(1)                --------->ZAT14<-------               --------->ANAC58           <---------MYB111(1)                <---------ANAC46--------     <---------DAG2   <---------ANAC55(2) <---------MYB46(2)               <---------ANAC46--------->ANAC58     <----------DOF2  ----------->GT1     <---------MYB59       --------->ANAC46     ----------->RAV1(1)  <-----------GT1--------->YAB1--------->AHL20(2)<<<<<<<<<ARR1  --------->ANAC58   <---------ZAT18 -------DOF2  --------->WOX13(1)        ------->TEIL  <---------YAB1    <-----------RAV1(1)--------->ANAC46 >DOF2       --------->MYB46(3)<---------AHL20(2)<<<<<<<<<ARR2  --------->ANAC58   --------->ZAT18   ttttaaactttatcaacaatcaacatgtaataattaaaaatcaacctaacaatcttataatattagacgcaattgtgttgtgtagagcaccacacgatat  9613200  Previous    Next  AGI:  At4g17100.1    Description:  serine protease protein -related, expressed pseudogene, blastp match of 64% identity and 1.9e-114 P-value to GP|29367523|gb|AAO72617.1||AY224498 putative serine protease-like protein {Oryza sativa (japonica cultivar-group)} Range:  from: 9609926    to: 9612667    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version