Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------ZAT2       <---------At4g35610       --------->ZAT2       --------->At4g35610                                                            --------->At5g28300  <---------ALFIN1                          <-------PIF5                             ----------->GT1  --------->ANAC46                          ------->PIF5                        <---------ANAC58  --------->ANAC58                       <---------ANAC58                       <---------ANAC58  --------->ANAC58                       <---------ANAC46                <---------At5g28300 ---------ALFIN1                         <---------ANAC58      ----------->HVH21--------->ETT(2) --->MYB46(1)                      <-------TEIL            --------->ZAT18    --------->REM1(2) --->MYB83   <-----------HVH21  <---------ANAC58  <---------MYB46(3)    <-----------GT1             - --ALFIN1   <----------DOF2     <---------ANAC58<---------ANAC46 <<<<<<<GRF7  <-----------HVH21    <-   ttccacaccagctcctttcagggccatcaaactagcgttcatggctcgtggtttgttcaaatgccctgacattgttactgtgtcgagcggtaacatgacg  9607000                                                                                          --------->ARR14(3)                                                                                          <---------ARR14(3)                                                                                          <----------             <---------ANAC58                                                        --------->ALFIN1             <---------ANAC58                                                        ----------->HVH21       --------->ANAC58            <---------YAB1<---------At4g35610               <---------ANAC58       --------->ANAC58      --------->ALFIN1--------->ALFIN1                      <---------ANAC46   --------->LBD16         --------->ALFIN1 ------->MYC3                           <---------ANAC58 <---------LBD16         <---------ANAC58   <-------MYC2                      ----------->RAV1(2) -------->MYB52(1)       <---------ANAC46   <-------MYC3                 <-----------GT1  <---------ARR11(3) --------ALFIN1          <---------ANAC58   ------->MYC2   <---------CCA1(2)<---------DAG2--------->ARR11(3)   aacaccggaacgctagcgtcgttcttggagtgtgggtatgagagaacgtggagcttctcccatttctcaagggtttcaccttctggcgtgaaggtcttct  9607100                                                          --------->REM1(1)                                                        <----------DOF2                                                      <------NtERF2                                                      --------->At4g35610                                                      --------->ATERF1(1)                                                     <---------ATERF1(1)                                                     ------>NtERF2                                                     <---------ERF1                          <-------                                                     <---------RAP2.3(1)                     <-------                                 <---------ANAC46   <---------RAP2.3(2)                   <----------DOF2                                 <---------ANAC58   <---------RAP2.6(2)                  --------->HSFB2a(1)                 ------>ZmHOX2a(1)                  <---------ANAC46                     <---------HSFC1(2)                --------->TOE2(3)<---------ANAC58   <---------RAP2.3(3)                  --------->HSFC1(2)    <---------ZAT18          <----------DOF2        <---------DEAR3(1)                 <---------ARR14(2)    --------->ZAT14       <---------ARR11(3)       <------NtERF2              <---------MYB46(3)    <---------ZAT14   ------->GAMYB                --------->ATERF1(1)        <-----------RAV1(1)    --------->ZAT18--------->MYB52(1)         <-----------RAV1(1)  ---------->DOF2    <------ZmHOX2a(1) -ARR10         --------->TOE1(3)<---------AtLEC2  --------->RAP2.6(3) --------->ARR11(3)<---------HSFB2a(1)   cgtgagtgaacttcatttccttaaccgagttctttgcttggaattgatatgttggcggcttcatcttcgcaaaggtcatgttgttggaggaactttcttg  9607200                                                                                                   <-     <<<<<<<ZML2                                                                                  <--  --------->HSFC1(1)                                                                              <--  <---------HSFC1(1)                                                                  --------->ICU4  --------->HSFB2a(2) <---------ANAC58              <-----------HVH21          <----------DOF2-------  <---------HSFB2a(2) <---------ANAC58       <---------GLK1(1)          <-----------GT1  <---------YAB1 --ANAC58         <----------DOF2            --------->GLK1(1)        <-----------GT1 <---------YAB1 --ANAC58        <---------ICU4            <------ZmHOX2a(1) --------------------->WRI1--------->YAB1   gtttctagaactcttggcatctttacgtttgataagagaactcgaggaattcagtgtcaattccatagtttttttctctctctttgttatgatgagaaat  9607300                  <------MYB83   --------->ARR11(1)                  <------MYB46(1)<---------ARR14(2)              <---------MYB46(3) --------->ARR14(2)               <---------ANAC58           <-------              <-----------RAV1(1)<---------ARR11(3)               <---------ANAC58        <---------YAB1 --------ANAC46  <---------AtMYB61  <---------YAB1                <---------ANAC46      <------------CBF -------------AtSPL8 <---------MYB46(3)           *TSS   --------->GLK1(2)       ---------->DOF2    < -------TOE2(3) <---------MYB52(1)--------->CCA1(2)     --------->ARR11(3)    --------->YAB1<-------- -->CCA1(2) <---------At4g35610  --------->ARR11(3) ---------->DOF2         <-----------TBP--------->ATHB12   gaggtagagaatagagctgttggtgtttgatagaagatatgtttgtgtttgagagaaagatgctgtttgtgtgtttgtatttataaagaatattgattgg  9607400                                                                                          --------->TOE2(3)                          --------->ALFIN1                                             <---------ALFIN1            <---------MYB59                        <---------ANAC58                    --------->REM1(1)            ------------>CBF                       <---------ANAC46     <-----------HVH21--------->ANAC46   <---------ANAC46    --------->DAG2              <---------ANAC58<-----------GT1   <-----------GT1 <---------MYB46(3)   ---------->DOF2        <---------TOE2(3)<---------DAG2  --------->ANAC46 --WOX13(1)--------->ANAC58          --------->RVE1(1)   <---------AHL20(2)   --------->ANAC58 ---------AtMYB61   <---------------AGL15  ---------->DOF2 <-----------GT1    --------->ANAC58 ----CBF   --------->ANAC58    ----------->GT1  <--------P<-----------GT1   <---------ALFIN1     ----   ctgtggtttggagacccaatttcaaaaagtggagagaaaatatcacaaaggttgcttattttaaccttttcacttgtcacacggttcttacacctcaaaa  9607500                                                                <-------MYC3                                                  <---------GLK1(2)                =====================bZIP_DOF   <---------AHL20(1)                <---------bZIP60(1)             --------->AHL20(1)                --------->TGA1a   --------->ARR11(3)            ------->MYC3                --------->bZIP60(1)             --------->AHL20(2)               <---------AHL20(2)     ----------->GT1      ---------->DOF2       <---------AHL20(2)       <---------At4g35610        < ------->GT1<-----------HVH21     <---------ARR11(3)  <---------YAB1     --------->At4g35610        -   tgaaaaattgtaaatgtcacatcagttacaaaggaagatgttttagttaataaattctcatttacatgtgtattcagctatagataattgagttttgttt  9607600               <-----------GT1           <---------AHL20(2)           --------->ATHB51           --------->AHL20(2)    <---------MYB46(3)    <------MYB83    <------MYB46(1)    ----------->GT1   <---------AtMYB61   <---------MYB46(3)         <---------ZAT14                         <----------DOF2  <--------P   <---------AHL20(2)                                     <---------DAG2         <------- -----------RAV1(1)          ------>ZmHOX2a(1)                       <---------ANAC58        -------- ----->ZmHOX2a(1)          ----------->RAV1(2)  --------->ZAT14      <---------ANAC58     --------->CCA1(2)   tcctgttggtgaattatttacttactcactcctgcagtttttagttacagagaactcttaaatctagtcttgcttttctcttgttaatggagataagctg  9607700                                                    -------->ATHB1                                                    <---------ICU4                                                   --------->AHL20(1)                                                   --------->ICU4                                         --------->ALFIN1                      --------------------->WRI1   --------->AHL20(2)         --------->At4g35610           <-----------RAV1(1)         <---------At4g35610         <---------ANAC46       <---------ANAC58              <---------ANAC58      --------->ARR11(3)       <---------ANAC58             <-------TEIL   <---------YAB1  <---------ICU4      <----------DOF2<---------ANAC58      <---------ARR11(3) --At4g35610    <----------DOF2------->MYC3        <---------AHL20(2)                        -------- ->At4g35610   <---------DAG2  <-------MYC3 <---------ANAC46                     --------->YAB1   ataattttggcttctcacctttggctttgaacacatggttcgtgtggctgaaaattattaagttctcttgattttagtttgaataagaagataagtgcaa  9607800                                       <---------AHL20(2)                                       <-----------GT1                                 <------NtERF2      <---------ICU4            <---------MYB46(3)      <---------AHL20(2)       <---------ANAC46             <---------ANAC58      --------->ATHB51         <---------RAP2.6(2)          <---------ANAC58      --------->AHL20(2)    <---------AtMYB61          <----------DOF2     --------->ICU4         <-----------RAV1(1)     <---------AHL20(2)  --------->AHL20(2)    <---------ANAC46            <-----------GT1  <---------AHL20(2)    <---------ANAC58      <---------ANAC58                     --------->CCA1(2) --------->AHL20(2)   --------->ARR11(3)      <---------ANAC58     <----------DOF2--------->ARR11(3) ->ZAT18 <-----------GT1<---------ANAC58  <----------DOF2   <---------ANAC46------>ZmHOX2a(1)    <---   cgatttaattatttctgtatgaaatttcttgtggtggctattaactttgcttattttctttttcttggactttccttcctgtaagatttgtgttttccaa  9607900  Previous    Next  AGI:  At4g17090.1    Description:  CT-BMY (BETA-AMYLASE 3, BETA-AMYLASE 8); beta-amylase. similar to BAM1/BMY7/TR-BAMY (BETA-AMYLASE 1), beta-amylase [Arabidopsis thaliana] (TAIR:AT3G23920.1); similar to beta-amylase PCT-BMYI [Solanum tuberosum] (GB:AAK84008.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62440.1); similar to unknown [Populus trichocarpa] (GB:ABK95564.1); contains InterPro domain Glycoside hydrolase, family 14B, plant; (InterPro:IPR001371); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 9604978    to: 9607350    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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