Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              ------>ZmHOX2a(2)          <---------ARR14(2)          <---------AGP1          --------->ARR11(3)          <---------ARR11(3)          --------->ARR14(2)          --------->AGP1         --------->GLK1(1)         <---------GLK1(1)  <---------ANAC55(2) <---------ICU4            --------->ICU4                                    <------MYB46(1) -------->ICU4            --------->ANAC58         ---------->ARF1           ----------->GT1 --->ANAC58<------ZmHOX2a(2)   <-----------GT1  <----------DOF2       --------->At4g35610 --->ANAC58--------->CCA1(2)<---------ICU4<----------DOF2             --------->ZAT2 --->ANAC55(2)            --------->ANAC58<---------DAG2<---------ALFIN1     <------MYB83      <-----   taataagtaagagatctggctatggagcaagtattacaggtttactttttcttttctcccacttgttttatgagcaggctggtttaaaactgtacatatg  9604100                                         --------->MYB46(3)                                  <----------DOF2                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                               --------->ARR11(3)                               <---------ARR14(3)                               <---------ARR11(3)                               <---------ARR14(2)                                             -------                               --------->ARR14(3)                                            ------->MYC3          --------->ANAC58     --------->ARR14(2)                                            <-------MYC3          --------->ANAC58    --------->RVE1(1) <---------ARR14(2)                  <----------DOF2 ------RAV1(1)             ---------->DOF2   --------->YAB1    ----------->GT1   <-----------GT1 ----   ttgttgaagagtaagcaatgtgtgttaacaaaagatctttgtaacaagcgtaacccatgtaagagaagtaacaaaacattgttttacttttacaacgtgt  9604200                                                                        <---------ATHB12        -----                                                                   <-------TEIL          ------>MYB46(1)         <---------DAG2                                          --------->ARR14(2)      ------>MYB83    <-----------GT1                                              <---------ARR14(2)      -------->P - -->ALFIN1<----------DOF2                                 <---------GLK1(1)           --------------- ------->GT1     <-----------GT1   ----------->GT1        --------->GLK1(1)           --------->MYB46(3)   tgaaaataacaccttttttttactagatttctatggatagaaattagaaaatgacatgagaattccagattcaaatcaacttgacaaaaccaacaaggga  9604300         --------->ARR11(3)         <---------ARR11(3)         --------->ARR14(2)         <---------ARR14(2)        <---------RVE1(1)        --------->RVE1(1)        --------->GLK1(1)                                                                          --        <---------GLK1(1)                                                                      ------       <---------ARR11(3)                                                                      <-----       --------->ARR11(3)                                     <------------AtMYB77             <-----   ---------->DOF2                                <------ZmHOX2a(2)    <---------YAB1         ------- ----->DOF2                                      --------->ARR11(3)<---------ANAC58           <------ ---------->GT1    ----------->HVH21             <---------ARR11(3)<---------ANAC58        <---------At4g35610 -->AGL1--------->CCA1(1)                   <-----------GT1 --------->MYB52(1)        <----------DOF2   aagagtaaagatatctggtctgtgacaaggtccaagtagagacgaattacagatcatctaggtaactgtgcttatggttcttcaaaccctttcagcaaat  9604400     --------->ATERF1(1) <---------ZAT2                                       ------>NtERF2 --------->ZAT2                           --------->ARR11(3) ---->ZmHOX2a(1)                          <---------AHL20(2) --->ARR14(2)                             <---------AHL20(1) ----ARR14(2)                  <---------ZAT2      <------NtERF2 <---------GLK1(2) ------ARR10                 --------->ZAT18       <---------ATERF1(1) -->GLK1(1)             ---------->DOF2   --------->AHL20(1) <---------ANAC55(2)                  <-- ---GLK1(1)<----------DOF2  --------->ALFIN1<------------CBF --------->ANAC55(2)    <----------DOF2   cctagcagccagcctttgtgtttgattaaagtgggctgggctaaaatattggccgaggccatcaagtgattctctcccgctcaagtcttttaatccttga  9604500                                                                                               ------                                                                                               ------                                                                                               ------                                                                                             --------                                                                                             <-------                                                                                             ------>NtERF2                                                                                            ---------                                                                                           <---------LBD16                     --------->ANAC58                                                 <---------ARR14(2)                     --------->ANAC55(1)                                              --------->ARR14(2)                     --------->ANAC55(2)                                           <---------ANAC46                     <---------ANAC55(2)                                           <---------ANAC58                     --------->ANAC58                                              <---------ANAC58                     --------->ANAC46                                            --------->LBD16-----                    <---------LBD16                                              --------------------                   <-----------GT1 ---------->DOF2                               ------>NtERF2-------                   --------->MYB52(1)    <-------TEIL                           --------->ANAC46<----           ----------->GT1 --------->TOE2(3)                                    <---------DEAR3(1)          ----------->GT1  --------->TOE1(3)                  ------>ZmHOX2a(2)<---------LBD16------- ----ZmHOX2a(1)   *TSS     <----------DOF2                --------->WRKY12--------->WOX13(1)---------   ggagaaaatggactggaaaattcacggaactttaacagaaagatgcaaaaatcgttctcgttgatccaaacagtggcaatctccggcgtattctccgccg  9604600 --->DEAR3(1) --->RAP2.3(3) --->RAP2.3(2) ->LBD16 --ATERF1(1) >DEAR3(1)                                                                                <---------At4g35610 ->NtERF2                                                                                 --------->ZAT2 ->WRI1                   <----------DOF2                                                 --------->At4g35610 -->RAP2.3(1)    --------->KAN4(2)                                                <---------TOE1(3) -------HVH21   <---------MYB46(3)      <<<<<<<<<TBF1                             <---------TOE2(3) -->ORA47(2)   <---------WOX13(1)--------->ARR11(3)                <---------AtLEC2       <---------ZAT2 >ANAC46     --------->ATHB12    <---------ARR11(3)            <----------DOF2<----------DOF2------>NtERF2   tctcatgctggtgagtgattgttcccgtctttcaagctcttcttcttcaattctcgtcttcttctctttccatgtctcatctttagggtttaagctgcct  9604700                                                                                     --------->ATERF1(1)                                                                                --------->ALFIN1                                                                       <---------GLK1(1)                           <------MYB46(1)                             --------->At4g35610                           <---------ANAC46                            --------->GLK1(1)                           <------MYB83                 <---------TOE1(2)     <---------ANAC46                          --------->MYB46(2)      --------->ZAT2      --------->ARR11(3)                   <-------TEIL                  --------->ARR11(3)   <---------ARR11(3)         --------->LBD16  --------->MYB59    ---------->DOF2     ------>ZmHOX2a(2)  <---------ATERF1(1)        --------------->AGL15      --------->GLK1(2)    <---------TOE2(2)   <-----------HVH21  <-----   tactcaatttccaggtatggattcatgttcggtagagaatcagcgagaaaagagctcggaggtttgatcgaagagctccgtcgtggaggctccaattctg  9604800                                                  --------->ARR14(2)                                                  <---------ARR14(2)                                                <---------HSFC1(2)                                                --------->HSFC1(2)                                                <---------HSFB2a(1)                                                --------->HSFB2a(1)                                              <------ZmHOX2a(1)                                       <------ZmHOX2a(1)              ------>ZmHOX2a(1)       ----------->HVH21        <---------ALFIN1            <---------LBD16<-------TEIL           --------->MYB52(2)       --   --------->ANAC46                 <---------HSFB2a(2)         <---------MYB52(1)              <----   <---------ALFIN1 --------->MYB59 --------->HSFB2a(2)  <---------MYB52(1)           <---------YAB1 ----YAB1     --------->LBD16      <---------LBD16<-----------ARR10     <---------MYB52(1)  <--------   attccactccccattcctgagttaggcattccaatttcccaggacggaggaggttcttcgttatccgttgctaagttagtttccgatttcgattaatgtt  9604900                                                                                                   <-                                                                                                 ----                                             <----------DOF2                                    <---- ------->AtLEC2                              ------>ZmHOX2a(1)           <---------TOE2(3)<-------TEIL ---TEIL                                 <---------ARR14(2)          <---------GLK1(2) --------->At4g35610 -TOE2(3)                                --------->ARR14(2)    <---------YAB1          --------->CCA1(2)   catgaaaattgatcaattgttgtataaaccgatgtgtttgacaaatcctttgagttaattcaagtatgaaagattatcgtttgaacgagagatgcatatt  9605000  Previous    Next  AGI:  At4g17085.1    Description:  similar to hypothetical protein OsI_023585 [Oryza sativa (indica cultivar-group)] (GB:EAZ02353.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD53569.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63494.1); contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 9604518    to: 9604990    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g17090.1    Description:  CT-BMY (BETA-AMYLASE 3, BETA-AMYLASE 8); beta-amylase. similar to BAM1/BMY7/TR-BAMY (BETA-AMYLASE 1), beta-amylase [Arabidopsis thaliana] (TAIR:AT3G23920.1); similar to beta-amylase PCT-BMYI [Solanum tuberosum] (GB:AAK84008.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62440.1); similar to unknown [Populus trichocarpa] (GB:ABK95564.1); contains InterPro domain Glycoside hydrolase, family 14B, plant; (InterPro:IPR001371); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 9604978    to: 9607350    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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