Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->ANAC58             <----------DOF2                 --------->ANAC46               <----------DOF2      <---           ------>ZmHOX2a(1)         ------->TEIL                     --------->ANAC55(1)       -----       --------->ARR14(2)         <---------ATHB12                    --------->ANAC46         <-----     <---------ALFIN1         --------->ANAC58                     --------->ZAT14   <----------DOF2   ----------->RAV1(1)        --------->ANAC58       <-------TEIL  <---------ZAT14--------->ANAC58 -------->ANAC46       --------->ANAC46      --------->ANAC58  --------->ZAT6     --------->ANAC58   tcgagccacaatcctctttgttcccacaaaacacccatgaatcgcacaagcaaggtccatcgttgccactacacataactttacaagctttacaacatcc  9597800                                          --------->SPL7                                         <---------ALFIN1                                         --------->ATERF1(1)                                        --------->LBD16                                        <---------SPL7                                        ----------->HVH21                                   --------->MYB46(3)                                  <---------At5g28300                              --------->AtMYB61                                <---------ZAT14                                  ------>MYB46(1)                                --------->ZAT14                                  ------>MYB83                               <-----------HVH21                                <---------ALFIN1                              --------->TGA1a                                  --------->DEAR3(1)                              --------->bZIP60(2)                              <---------MYB55(2)                              ============================bZIP_DOF             --------->MYB46(3)                              --------->O2--------->ARR14(2)                   <---------MYB111(2)                         --------->PCF2--------->RAP2.6(2)                    --------->ANAC58                        --------->SPL7 --------->DEAR3(1)                     --------->ANAC58                     <---------ANAC58 <---------LBD16                         --------->ANAC46                     <---------ANAC58------>NtERF2                    --------->ANAC58                     <---------ANAC55(2)<---------ATERF1(1)           --------->ANAC46                    <-----------------------TaNAC69(2)       <---------YAB1  ------->GAMYB       <---            --------->TOE2(3) --------->ANAC46              <-----------GT1 <---------ALFIN1     <--- --------HVH21    <---------ARR14(2) --------->ABI4(1)   <---------GLK1(2)----------->RAV1(1)    ---- ---->WOX13(1)    --------->ARR14(2)--------->DEAR3(1) --------->LBD16--------->ANAC58   --------->DEAR3(1) --TEIL --------->AHL20(2)  <---------ALFIN1   ---------->DOF2       <---------LBD16   <---------At5g28300   atcagacgaattaaacttaaaatccgtgccccacttcaccgccggaccccaaagctccagattatcaattccacggcaacacccaccttcaccgtcttca  9597900                       <----------DOF2                    =======================HOX2a_HOX2a                     ------>ZmHOX2a(1)                    ------>ZmHOX2a(2)                  ------>NtERF2                          ========================HOX2a_HOX2a                 --------->ARR14(2)                      <------ZmHOX2a(2)                 <---------ARR14(2)                     --------->ARR14(3)                <------NtERF2         --------->LBD16   <-----------ARR10               <---------ATERF1(1)   --------->ANAC46   <---------ARR11(3)             <---------LBD16        <---------LBD16     <---------ARR14(3)          ==================HOX2a_HOX2a                 --------->ARR14(2)        <---------ARR11(3)          --------->LBD16     <---------ARR14(2)        --------->ARR11(3)        --------->MYB46(3)    --------->ARR11(3) ----GAMYB------>ZmHOX2a(2)      --------->SPL7   --------->ALFIN1 ------At4g35610<---------At4g35610 >>>>>>>>>>AtSR1<---------ZAT14<---------SPL7            --------- ----->At4g35610--------->ATERF1(1)--------->DEAR3(1)  <------ZmHOX2a(1)  <------ZmHOX2a(1)<---------ANAC46   gttgcatcgtgatctcgcggctcctctttgaatcgaaccgcggaatcaacgagtgtaggatcttgggatggacggaggacagaagagaaaacagcgtaga  9598000                                                                                                <----                                                                                              <------                                           ---------->DOF2                                   --------                                         --------->At5g28300                                <--------                                         <------NtERF2                               <------NtERF2                                        ----------->GT1                             --------->LBD16                                      <------NtERF2                                --------->DEAR3(1)                                     ------>NtERF2                                <---------LBD16----                                    --------->ALFIN1                            --------->DEAR3(1)                                    <---------DEAR3(1)        <---------ANAC46 <------NtERF2<--------   --------->ZAT6       ---------->DOF2<---------ANAC46      <------NtERF2     --------->ATERF1(1) <- >ZAT14        <-----------GT1 --------->MYB52(1)  <-----------RAV1(2)        <---------ATERF1(1)<---   cgataacacaagagattaaaccgattaaaagaagaacggtggcggtaaaacggccaggctcgcgtcgtttaatcgacgggcatcgccggagagtccgagg  9598100    <---------DOF5.7(2)   --------->WRKY38(1)   --------->WRKY12   --------->WRKY45   ----------->HVH21  --------->DOF5.7(2) --ZmHOX2a(1) ---TOE1(2)                                                                              -------->HAHB4 ->LBD16                                                                                 --------->YAB1 -TOE2(1)                                                                                <---------ICU4 ----->ARR14(2)             ---------->DOF2          <---------ANAC55(2)                --------->ICU4 -TOE1(1)               --------->ANAC58             ----------->GT1                  --------->YAB1 ------TEIL>>>>>>>>>TBF1--------->ANAC58         <-----------HVH21       <---------GLK1(2) *TSS ------ARR14(2)       ---------->DOF2    ----------->GT1     ----------->GT1 <----------DOF2   attcgttgacgaagaagaagatgcgaaagcaaaaggaagagagaagtaatatgtcatgtgaaattgaaaaatttggaatctttttgaataataatgaaga  9598200                                                   <---------At4g35610                                               <---------ARR14(2)                                           <------NtERF2                                          <---------ERF1                                   ------>ZmHOX2a(2)                              ------------>CBF --------->ARR14(2)                  <------------CBF                          <XXXXXXXXXXXXXXXXXXXXMIR169A                            --------->ATHB12                        <------MYB46(1)  <---------DEAR3(1)             <---------AtLEC2 <---------ARR11(3)                        <---------MYB46(3)<---------RAP2.3(1)        <----------DOF2     --------->ARR11(3)                        <------MYB83<---------ANAC58   <---------HSFB2a(2)       <---------YAB1                    <-----------RAV1(1)  <---------RAP2.3(2)<---------HSFB2a(1)<---------At4g35610                    <---------MYB46(3)   <---------RAP2.3(3)--------->HSFB2a(1)--------->At4g35610  ---------->DOF2--------->ALFIN1   <---------ANAC58   --------->HSFB2a(2)   <-----------RAV1(2) <---   gagagaaagagaagagagagtgttgttggtgagtcaattcgtggctgcgcttccgctctggaacctttgaactttcatggcagatgattgtgatctcttc  9598300                <----------DOF2      --------------->AtSPL8                                                                ---------     <-------GAMYB    <---------GLK1(1)             --------->ANAC58                        <--------    <---------MYB46(3)--------->GLK1(1)             --------->ANAC55(2)           --------->TOE2(3)    <-----------RAV1(1)   <----------DOF2           --------->ANAC46              --------->TOE1(3) -------DOF2<----------DOF2   ---------->ID1        --------->ANAC58              <---------MYB59   ttttgtctgttgtactttctttggaattctttttccttctaagttataacattcaagtaattgaaacgctgtcgttttagcaaacctaaaccttttaaat  9598400       --------->ANAC58       --------->ANAC58                                 <---------AHL20(2)       --------->ANAC55(2)                            <---------AHL20(2)       --------->ANAC46                            <---------AHL20(2)   <---------ANAC58                                <---------AHL20(1)      <----------DOF2   <---------ANAC58                                --------->AHL20(1)    <---------YAB1 <---------YAB1                               <---------YAB1           --------->YAB1               - >AHL20(2)                            ------->TEIL--------->AHL20(2) ------->TEIL          ------->TEIL -AHL20(2)                         <---------YAB1<---------YAB1   <---------ATHB12<-------TEIL  -----   ggtatgcttacgaaatatgaaatatgaaatatgaaatatgaatcacatatgattatattttttttgcaatgaatcatctttagattcaatatgcatttga  9598500                                                                          xxxxxxxxxxxxxxxx>smallRNA(i)                                                                        <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                       <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                      xxxxxxxxxxxxxxxx>smallRNA(i)                                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                   --------->AtLEC2                                                                   --------->ANAC58                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                 --------->YAB1                                                                <---------ATHB12                                                                --------->ICU4         <---------MYB46(3)                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                              --------->WOX13(1)     xxxxxxxxxxxxxxxx                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                         <xxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                            --------->TOE1(2)        <---------ZAT6--------->ANAC58 <---------ANAC46                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          ------->TEIL               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                        xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------TOE2(3)   <xxxxxxxxxxxxxxxxsmallRNA(s)                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                   --------->YAB1                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --------->ARR14(2)                  <---------YAB1                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------ARR14(2)                <---------ICU4                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------SPL7                --------->YAB1                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------LBD16               --------->ICU4                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxxxxxxx --------->DOF2<---------ATHB12             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   xxxxxxxxxxxxxxxx>smallRNA(i) ----->DOF2<-------TEIL--------->ANAC55(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxx   aagaaagtttagattcaattatcatatgtaactacgatggtattcgagttttttagagttgaggcaatcatgcaaatgtccgagtttcgcggttcggaat  9598600                       <---------MYB46(3)                                                   <--------                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                <---------ANAC58           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                           <---------ANAC58           --------->TOE1(1)                                                   --------->MYB59           --------->TOE2(1)                          <---------TOE2(2)       <-------TEIL---------->ID1          <---------LBD16 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               --------->ARR14(1)          ------>ZmHOX2a(1)                        <---------ANAC46         --------->ARR14(2)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------GLK1(2)             <---------GLK1(2) >smallRNA(i)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 --------->ARR11(1) xxxxx>smallRNA(se3)<------ZmHOX2a(1)       ----------->ARR10         <---------YAB1 --------->ICU4 xxx>smallRNA(si3)<---------TOE2(3)    <---------YAB1 <---------TOE1(2)     <---------ARR14(2)   tggtgttttttcctcggacttaggatggatgctaatctcttatgcttagattgtcgtagtttttttttttttgttatagattcggtcattttggcttttt  9598700  Previous    Next  AGI:  At4g17070.1    Description:  peptidyl-prolyl cis-trans isomerase. similar to unnamed protein product [Vitis vinifera] (GB:CAO17805.1); contains InterPro domain Cyclophilin-like (InterPro:IPR015891); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; (InterPro:IPR002130) Range:  from: 9595404    to: 9598191    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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