Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <-----------GT1                                                --------->AHL20(2)                  <<<<<<<GRF7              ------>ZmHOX2a(1)                ----------->HVH21         --------->TOE2(3)              ----------->RAV1(2)        ------>ZmHOX2a(2)             <---------ARR11(3)         <------ZmHOX2a(2)         ---------->DOF2               <---------ARR14(2)                                      <-----       <------NtERF2                   --------->ARR14(2)                            --------->TOE1(3)      --------->RAP2.6(2)              <---------ARR11(3)                            --------->TOE2(2)      ------>NtERF2--------->bZIP60(1) <---------GLK1(2)                             --------->TOE1(2)     <---------RAP2.6(2)               <---------ARR14(3)                         <-----------GT1     <---------ATERF1(2)               --------->ARR14(3)                    --------->AHL20(2)<-----     <---------DEAR3(1)                --------->ARR11(3)       ================================RAV     --------->ATERF1(2)             ----------->ARR10          ----------->RAV1(1) ----------->RAV1(2)   gcaagaggcggcaaagacctgacaccatcttaagaatgtaagatcctcaattttttcaaaattcaacaacatagacacataaattaacctgagaatggct  9581000                                                      ------>NtERF2                                                     --------->DEAR3(1)                                                   ------>NtERF2                                                  --------->ANAC46                                                  --------->ANAC58                                                  --------->ANAC58                         <---------LBD16                                                  --------->bZIP60(1)                   <---------ANAC58                                                  <---------TGA2(1)                     <---------ANAC58                                                  <---------bZIP60(1)            <---------ARR11(3)                                                  --------->TGA2(1)              --------->ARR11(3)         --------->ARR11(3)                    ----------->HVH21                --------->YAB1     ---------->DOF2                           ----------->TGA1                --------->ICU4 <------NtERF2 ----ANAC58          <---------ZAT6     <---------ANAC46                       <---------ATHB12  ---- ----ANAC58     <---------REM1(1)     <---------MYB46(3)             --------->ICU4------>ZmHOX2a(2)   tcgcagataaagacattgttgtagagtttgtcaagcttgatggctggaagtgacgccaccatgtccatgaaatttttagcaatgatcttaacttgcggca  9581100                                                                                      --------->ZAT2                                                                                      <---------At4g35610                          <---------ZAT14                                             <---------ZAT2                          ----------->HVH21            --------->ANAC58     ---------->DOF2                          --------->ZAT14  --------->ZAT14                 --------->ANAC46            --------->GLK1(1)              <---------ZAT14     <---------TOE2(3)   <------ZmHOX2a(2)            <---------GLK1(1)              --------->ZAT18     <---------TOE1(3)  <-----------HVH21           --------->ARR14(2)         ---------->DOF2 --------->LBD16 --------->ANAC46--------->At4g35610           <---------GLK1(2)        --------->HSFB2a(2)--------->ANAC58    <---------ALFIN1 --------- ----->At4g35610 <---------MYB52(1) <---------HSFB2a(2)--------->ANAC46  ----------->RAV1(1)---------   tcttcaccaattggattcccttactcactggaccggttctaaaagagcacagtttccacgaaattagggtttatgccacacagcgatcagctcgaagcaa  9581200                                                                                           <---------ANAC46                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                     <---------TOE1(3)                                                             --------->LBD16         <---------TOE2(3)                                                            --------->HSFB2a(2)     ---------->DOF2                    ------>ZmHOX2a(1)                       <---------HSFB2a(2)    <---------AHL20(2)               --------->GLK1(1)                        --------->GLK1(1)      <------ZmHOX2a(1) >ANAC58       <---------GLK1(1)                       <---------ARR11(3)  <------ZmHOX2a(1) >ANAC58 ---------->DOF2   <----------ID1              --------->ARR11(3)<---------TOE2(3)<---------LBD16   acctagttaactaaagcatctcctcaaaaaaaacaaatccaaaacagttctaaacaagaactccagaaaacaaataaggaaggatttaaagtttcgggtt  9581300                                    <---------GLK1(2)                                  <---------TOE1(3)                                  --------->MYB59                                  <---------TOE2(3)                            <---------TOE1(3)                                  --------->AHL20(2)                            <---------TOE2(3)    --------->HSFB2a(2)       --------->LBD16       ----                           ---------->DOF2       <---------HSFB2a(2)     ------>ZmHOX2a(2)--------->ANAC46                          <---------AHL20(2)<----------DOF2    --------->HSFB2a(2) <-----------GT1   cgagtttgagaacaatacagaattgaatttaaagtttaggttctctcttttctcgatgagctcttctacaattgatcccgattatttactacccagaatc  9581400           *TSS         --------->ANAC58                                          <-----------------AGL2           -         --------->ANAC58                                  ----------->GT1                          -       --------->MYB52(1)             --------->AHL20(2) <---------ANAC58                           -      ----------->TGA1              <---------ARR11(3)   <---------ANAC58                     ------- ------>DOF2              <------ZmHOX2a(1) <---------TOE2(3)    --------->ZAT6       ----------->TBP   aaagaaaactgacgaaatcgatcgaagaggatggccaagataaattaagttttaatgggccttgtgaatactactaatgggcctatctatataacaaaaa  9581500                                                    ----------->HVH21                                                   <---------WOX13(1)           --------->ANAC58  <------NtERF2            --------->ATHB12      <---------WRKY18(1)            --------->ANAC46  ------------>CBF       <--------P           <---------ANAC58                  <---------ANAC55(2) ------>NtERF2           <---------WOX13(1)   <---------ANAC58                  --------->ANAC58  <-- -------->ANAC58       ----------->GT1      <---------YAB1              ---------->DOF2           --- -------->ANAC58       --------->ATHB12 --------->CCA1(2)    ----------->GT1    --------->ANAC55(2) -------->ANAC46--------->AtLEC2       <---------ARR11(3) XXXXXXXXXXXXXXXXXXX>MIR158B        <------- --->DOF2     <---------AtLEC2         --------->ARR11(3) XXXXXXXXXXXXXXXXXXX>MIR158A        --------   tcgcgccaatttgttttcatgaaaatggttgattagggagagatatatgcttgactgaccaaaatgtaaacaaaaaaagcttacgaaacgtttgatcatc  9581600            <---------ICU4    --------->AHL20(2)    <---------AHL20(2)--------->AHL20(2)                                                         ---- -------At4g35610    <---------WOX13(1)                                                 --------->AHL20(2) ------>At4g35610 --------->ICU4                                                        <---------AHL20(2) --ICU4     <---------------AtSPL8                                                  --------->AHL20(2) ->YAB1  --------->ATHB12      --------->YAB1    --------->ANAC46                <---------ANAC55(2)   atctgataaattgattagtactgatttattccatcaaaatcaaactcatacaaaccattacaatcttcttagtgagacacaatacataaattatatatga  9581700                                <---------AHL20(1)                                --------->AHL20(1)                               --------->AHL20(2)                            --------->YAB1                           <---------AHL20(2)               <---------ARR11(3)                         --------->TOE2(3)                  --------->ARR11(3)                        <---------ICU4                      <---------AHL20(2)                        <--------HAHB4                      --------->AHL20(1)                        --------->ATHB12               <---------AHL20(2)                       --------->ICU4                  --------->AHL20(2)                       <---------YAB1              --------->ATHB51                       <---------AHL20(2)                     --------->YAB1      <---------HSFB2a(2)--------->AHL20(2)            <---------ICU4                  --------->YAB1<---------AHL20(2) --------->AHL20(2)                    --------->AHL20(2)                 <---------AHL20(2)      ------>ZmHOX2a(1) --------->AHL20(2)          --------->YAB1             <---------AHL20(2)<---------AHL20(2) --------->ICU4                      <---------YAB1             --------->AHL20(2)--------->YAB1    <----------DOF2                    --------->YAB1  <     <---------YAB1 <---------YAB1       --------->HSFB2a(2)<---------AHL20(1)      --------->TOE2(3) --->TEIL--------->AHL20(2)--------->AHL20(2)  --------->ZAT18                      --------->TOE1(3)   atctactacgattatttatattatcatcattaattatattgtcctagagggcattatttaaatatattagccattgcatacagaaaccataataaatact  9581800                                                                     <---------MYB52(1)                                                                    ------>NtERF2                                                                    --------->LBD16                                                                  --------->ATERF1(1)                                                                  <---------LBD16                                                                  <------NtERF2                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                                <---------PCF2                                                               <------NtERF2                                                               --------->ATERF1(1)                                                              <---------ATERF1(1)          <---------ANAC46                                                             --------->ALFIN1              <---------ANAC58                                                           <------MYB46(1)         --------->LBD16                                                           <------MYB83          <---------At4g35610                                 --------->AHL20(2)       <---------AtMYB61      <---------LBD16                              --------->WOX13(1)          <---------TOE1(2)      --------->At4g35610 --------->YAB1       ----------->GT1         <-----------RAV1(1)<---------ATERF1(1)       <---------ANAC58 ----------->GT1     --------->DAG2<---------ANAC55(2)    <---------TOE2(2)   <---------ATHB12      < ---------YAB1      ---------->DOF2--------->ANAC55(2) <---------ANAC46     --------->WOX13(1)     <-   atatgataaaaacacactgatgaaaagtgaatcaattaagtaagtagaatgttggagtcgtaggtggctccggcagtccaatcagcgggaatagcgtttg  9581900  Previous    Next  AGI:  At4g17020.1    Description:  transcription factor-related. similar to hypothetical protein [Vitis vinifera] (GB:CAN81292.1); similar to OSJNBb0017I01.15 [Oryza sativa (japonica cultivar-group)] (GB:CAE05735.1); contains InterPro domain Transcription factor Tfb2; (InterPro:IPR004598) Range:  from: 9577795    to: 9581411    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g17030.1    Description:  ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1). Identical to Expansin-like B1 precursor (EXLB1) [Arabidopsis Thaliana] (GB:O23547); similar to ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A2) [Arabidopsis thaliana] (TAIR:AT4G38400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65773.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Major pollen allergen Lol pI; (InterPro:IPR005795); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Pollen allergen/expansin, C-termin Range:  from: 9581605    to: 9583309    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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