Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------WRKY18(1)        ----------->HVH21    ------>NtERF2                                                           <---------TOE2(3) --------->ZAT2                                  -------->HAHB4             --------->ANAC58 <---------At4g35610     <---------WOX13(1)      --------->YAB1--------->ANAC58         ----------->GT1 <---------ZAT2<---------YAB1 --------->TOE2(3) <---------YAB1 --------->ANAC58        >>>>>>>>>TBF1 --------->At4g35610  <---------YAB1           <---------TOE2(3)            --------->ANAC58   ------ ---->ZmHOX2a(1)  <---------TOE2(3)<---------GLK1(2)    <----------DOF2  <---------ATHB12     -------   cctagctgccatgacctattaatgttgattaacatcaaattcttaagttaatgatacactttaaaacgaaatcaaatcaaggaagagaagaagaaaaaaa  9569500                   --------->LBD16                --------->ARR14(2)               -------->P                         --------->GLK1(2)           <---------At4g35610             <---------ANAC58      <----------DOF2                      <---------ANAC58                        ------>ZmHOX2a(1) --->DAG2  --------->At4g35610<---------AHL20(2)  <---------ARR14(2)  <---------At4g35610     <------ --->DOF2 <---------TOE1(3) ------->TEIL<---------WOX13(1)     ------>ZmHOX2a(1)  --------->TOE2(3)   gtttggaactttaagctaacccgaagaacgaattttttgtagattgcttccgaatccaaaaattcctcatgcttctgatcacatcctaaatacacattat  9569600                                                                                                    <                                                                                                    -                                                                                                   --                                                       --------------->AGL15                       <-                                                       <---------------AGL15                       --                                                      --------->TOE1(3)                            <-                                                      ----------------->AGL2                       <-                                            --------->ZAT14                                    <-----                                            <---------ZAT14                            --------->YAB1   =====================HOX2a_HOX2a         <---------ZAT18                         --------->YAB1 --   <------ZmHOX2a(1)              --------->AHL20(2)  --------->TOE2(3)            <---------YAB1 <-- ---ICU4         <------ZmHOX2a(2)<---------AHL20(2)  ----------------->AGL3  ----------->GT1<-------   caccaggaaaccaaaatggatcaaaacataaactaattaaaaactgttcactaaaaccctaatttagcaattttcagaaaatgttataatcaaatttccc  9569700   <---------LBD16 ------>ZmHOX2a(2)                                                                        <---------HSFB2a(2) ------ZmHOX2a(2)                                                                         --------->HSFB2a(2) -------->CCA1(2)                                                                      --------->ZAT6 ------->ARR14(2)                                                           <---------ARR11(3) --------ARR14(2)           --------->ATHB12                                <---------ARR14(2) ------->AGP1               <---------ICU4                                  --------->ARR14(2) --------AGP1              <---------YAB1                                   --------->ARR11(3) --------ARR11(3)          <---------ATHB12                          --------->ZAT18  ------>MYB46(1) ----LBD16    <---------TOE2(3)                                      <---------ZAT14  ------>MYB83 ------->ARR11(3)        --------->YAB1                              <---------ZAT18  -------->P -------CCA1(2)     <---------YAB1                            ---------->DOF2--------->GLK1(2) ----GT1  --------->TOE2(3)--------->ICU4                ----------->GT1    <---------GLK1(2)<<<<<<<ZML2   agatctgtggaacattaatgttattagtaatgatttgattcgaattttgaacaagggaaatgtaaaaagagtgaacaagattctgaccaactctagaaca  9569800                                            <---------ANAC46                                         --------->ALFIN1                                        <-----------HVH21                                       <---------ANAC46                                      <---------DEAR3(1)                                 <-----------RAV1(1)                                ------>ZmHOX2a(2)                              <---------ARR11(3)             <---------At4g35610                  ------>ZmHOX2a(1)  --------->ZAT18         --------->At4g35610                  =====================HOX2a_HOX2a           --------->HSFC1(2)                  <-----------HVH21  <---------ABI4(1)       <---------HSFB2a(1)           --------->YAB1     --------->ARR11(3)             <---------ZAT2          <------ZmHOX2a(2)   <---------ARR14(2)             --------->HSFB2a(1)          ===============HOX2a_HOX2a <---------ZAT14   --------->TOE1(2)        ------->GAMYB       ----------->ARR10  <---------ETT(2)           <---------ANAC46     --------->MYB52(1)  <---------DEAR3(1)<---------AtMYB61 <---------HSFC1(2)           --------->TOE2(3)   gaaccagtaacgatcatctccttcagggcgatgatctggtgcggtgaggtctacaaacttgggagcttctattgtctcgtagaagtcttcttcgttaaac  9569900        --------->YAB1             --------->ANAC46       <---------YAB1            --------->ZAT6                                           <---------- --------->MYB46(3)     ------>NtERF2                        <---------ZAT14       ---------->DOF2   tcatccactatcatatgctcaaatgcctccatcttacactaaattagaaattcgcagagagagtatagaagaacagagagagagagaaagagtattgtct  9570000                                                                                  -------->HAHB4         <---------ARR14(2)                                                   <---------YAB1      <---------ANAC55(2)                                                   ----------->GT1      <---------ANAC46                                                   <------ZmHOX2a(1)      --------->ANAC55(2)                                            ---------->DOF2      <---------ANAC58            <---------REM1(1)             ---------->DOF2   --------->YAB1     <-------TEIL     <---------ZAT2                        <---------RAP2.6(3)   <---------ICU4  <------MYB46(1)     <---------At4g35610                  --------------->AGL15 <---------ATHB51  <---------ANAC58    --------->At4g35610                  <---------------AGL15 --------->ICU4  <------MYB83    --------->STY1(2)       <---------HSFB2a(1)<---------MYB52(1)--------->YAB1  <-----  <---------ANAC58<---------At4g35610     --------->KAN4(1)----------->GT1<------------CBF <--------- --CBF<---------ANAC58--------->ZAT2     <---------KAN4(2) ==========================================   aatttggtgcgtgtctgtttagctagctcagacaagatgaaggaacattcacagaaactagccgttaaaaggaaaggattgtaataatggtctcttttca  9570100                                                                    <---------ARR14(2)                                                         --------->LBD16                                              <----------DOF2  ----------->GT1                                         <---------HSFC1(2)   --------->DAG2              --------->ZAT14            --------->HSFC1(2)  <---------ZAT14                       --     <-----------GT1             <---------At4g35610    --------------->AGL15                     --- ----LBD16    <---------ZAT14    --------->At4g35610    <---------ANAC46                      ------- -DOF2  <-----------TGA1<---------YAB1   --------->HSFB2a(1) ---------->DOF2 ---------->DOF2  ------- =======================================================================MADS_MADS  <------ZmHOX2a(1)   gggttattttcgtcactacagtgattttgattttgagcttcgaagcatctttttcattccgagtaaagtaaatctgaaggaaagaggagacagaagaagc  9570200                                                                                                 <---                                                                                                 <---                                                                       --------->YAB1          <-----                                                                      <---------YAB1          -------     <-------TEIL                                                   --------->YAB1    --------->AHL20(1) ------->MYB52(1) <---------CCA1(2)                           --------->TOE2(3)       <---------ARR11(3) ------>MYB52(1) <---------MYB52(1)               --------->ANAC46  <---------ICU4    --------->ARR11(3) -->ANAC58--------->AHL20(2)                    <-----------GT1    <---------ATHB12   <---------AHL20(1) -->ANAC58<---------AHL20(2)           <-----------GT1       --------->ANAC46     <------ZmHOX2a(1)   aaaccggttcatttaaaccggtatctatatagaaccattttaaaccctgtttacgactcttaaacgtcaataatcatagaggcaggaatattttttgttt  9570300                                                                       -------->HAHB4                                                       <-----------GT1 <---------ICU4                                                     <---------AHL20(2)<---------AHL20(2)                                                    <---------------AGL15                                                 --------->AHL20(2)   --------->ICU4                                           --------->ANAC55(2)        <---------YAB1                                        --------->ARR14(2)            <---------ATHB51----------->RAV1(1)    --------->ANAC46                    <---------ARR14(2)       ----------->GT1  <---------ZAT18 ------ANAC58   --------------------->WRI1 <---------ANAC55(2) ---------->DOF2    --------->ZAT18 ------ANAC58   <----------DOF2         --------->GLK1(2) --------------->AGL15---------->DOF2      < ------GT1   <---------YAB1----------->HVH21--------->LBD16----------->GT1 --------->MYB59      <---- --->ID1  <---------AHL20(2)       <-------TEIL  <---------AHL20(2)--------->AHL20(2)--------->ANAC46   ctttccacataatttatgctttgttttcttcgacagattcaaaatccgtatttaatttaactggtaaaagtaattattcggtaatgcacaacatttctct  9570400  Previous    Next  AGI:  At4g17000.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to hypothetical protein [Capsella rubella] (GB:CAC82614.1) Range:  from: 9566921    to: 9569932    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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