Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------YAB1           <---------ANAC55(1)           <---------ANAC58           <---------ANAC55(2)                                                        <---------ARR11(3)           <---------ANAC46                               <---------YAB1              --------->ARR11(3)           <---------ANAC58                         <---------ZAT6     ------->TEIL  --------->CCA1(1)  <-----------GT1                               <---------ZAT14 <---------ANAC55(2)  --------->RVE1(1) <-----------GT1                            <---------TOE2(3)   <---------TOE2(3)  --------->AHL20(2) -------->AHL20(2)                   <---------AHL20(2) <---------MYB46(3) <-----------GT1   aatttaacacattacgtttgggtttatttagttccatattttttttagggtatagtgtttgttattaagtatgtattttacaaaaaaaaatctcaagtgt  9559800                                  <---------AHL20(1)                     --------->ANAC46                     --------->ANAC58              --------->GLK1(2)<-----------------AGL1                     <----------ID1                <---------ARR14(2)                     --------->ANAC58          <------NtERF2<---------ARR11(3)              <---------HSFB2a(2) <---------AHL20(2)        --------->ARR11(3)                      <        <---------TOE1(3)         --------->AHL20(1)    ---------->DOF2     ----------->GT1     -----        <---------TOE2(3)  --------->GLK1(2)  ----------->GT1    --------->ANAC46          --------->YAB1       ---------->DOF2     <---------ARR11(3)--------->ALFIN1--------->CCA1(2)          --------->YAB1   ttcattttttaaagttgcagaaaacgcaaaatctaaaatatttgaaggtggcaaatctaaaagatttaagtcacaaaatggcaaaatcaacaataatcct  9559900           <------MYB46(1)           <------MYB83          <---------AtMYB61          --------->ALFIN1    <---------ANAC46          <---------DEAR3(1)<---------DOF5.7(2)        <---------ANAC58   --------->WRKY38(1)                                 <---------------AGL15        <---------ANAC46   ----------->HVH21                                   --------->TOE2(3)        <---------ANAC58   --------->WRKY12<---------ANAC58                    --------->TOE1(3) <---       <---------MYB46(3) <---------MYB52(1)  ------->MYC2                    --------->ZAT6   ------   <---------YAB1         --------->DOF5.7(2) <-------MYC3           --------->ALFIN1          <-----  <---------AHL20(2)     --------->At4g35610  <-------MYC2         <---------bZIP60(2)        <------ ---------AHL20(2)      <---------MYB46(3) <---------ANAC58        --------->ALFIN1           ------- ->ZmHOX2a(1)<---------ANAC46<---------TOE2(3)------->MYC3       <------ZmHOX2a(1)     <------ZmHOX2a(1)   atattattttgggtggtgttgatgagccgttgacgtagaagaatagcatgtggccttatttgctataggatgtggccctaaccctaataggatgagaaat  9560000                                                                                   <---------ALFIN1                                                                                   --------->ABI4(1)                                                                                  --------->MYB46(3)                                                                            --------->ANAC46                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                          <-----------GT1<---------ALFIN1                                                                     <----------DOF2   <---------ALFIN1                           ------>MYB46(1)                       --------->O2     --------->AtMYB61                           -------->P                            <---------bZIP60(2)  <---------ALFIN1                           ------>MYB83                          <---------bZIP60(1) <---------ALFIN1                          --------->MYB52(1)                     <---------ANAC58 --------->DEAR3(1)                          --------->MYB55(1)                     <---------O2    <---------ALFIN1                         --------->AtMYB61                       <---------TGA2(1)<---------MYB55(2)                         --------->MYB46(3)                      --------->bZIP60(1)<---------ALFIN1                        <---------MYB52(2)                       --------->TGA2(1)<---------ALFIN1                        --------->MYB46(3)                       <---------ANAC46--------->ANAC58 ------ICU4 <---------ANAC58    --------->REM1(2)                <---------ANAC58--------->ANAC58 --->ARR11(3)           --------->DEAR3(2)                      ----------->STF1 --------->ANAC46 ----ARR11(3)      --------->ALFIN1                            <---------TGA2(2)------>NtERF2     --- ---GLK1(1) <---------ANAC46 ------->GAMYB                    ----------->TGA1 --------->AtMYB61  --- -->GLK1(1) <---------ANAC58<------------AtMYB77              ----------->HVH21<---------ALFIN1  ----   ctttgctcaacttggcttagagtggaaccaaccgtgaagcatccgtctcaaaaatgtctactctatgacgtctttttcaccccaccccccccctctccac  9560100   <------NtERF2  <---------ATERF1(1) --------->PCF2                                   <-----------GT1 ------>ANAC58                     <---------ANAC58     <----------DOF2 ------>ANAC58                     <---------ANAC58   *TSS                        <<<<<<<<<TBF1 ------>DOF2                    <----------DOF2  <-----------GT1     <---------AtLEC2      --------->AGP1   aaggcccctccatttctgtataaacttcagaatgctttcttgagaatgtttttatcttctttctatagtttccatgaagtcttcttcttctcagagctac  9560200                                                             --------->ARR11(3)                                     --------->YAB1         <------ZmHOX2a(1)                                     --------->ATHB12       ================HOX2a_HOX2a                                    <---------ATHB12      --------->ANAC58                                 <---------ALFIN1         --------->ANAC58                               <------NtERF2      <---------ZAT2                               ------>NtERF2     ------>NtERF2                              --------->ANAC58  <---------ALFIN1                              --------->ANAC58  --------->RAP2.6(2)                          ------->GAMYB         <---------ALFIN1     --------->ANAC46 --------->MYB46(3)               <---------ICU4  -----        <---------ALFIN1 <---------ARR11(3)   --------->At4g35610           <-------TEIL    ---------       --------->LBD16   --------->ARR11(3)   <---------At4g35610    ------>ZmHOX2a(2)      ---------      --------->ANAC46   <-----------ARR10   ----------------------->TaNAC69(2)<---------------------WRI1   gatgttttccccaacttcagaggggaagatgtccgccactcattagtcagccaccttcgtaaggaacttgatcgcaaattcatcaatacattcaacgaca  9560300                                                                                                    -                                                                     ---------->ID1                 <                                                                 <---------O2                       <                                                                 <---------TGA1a                    <                                                                 --------->O2                       -                                                                 --------->TGA1a                    -                                                             ------>ZmHOX2a(2)                      -                                                            <------ZmHOX2a(2)                       <                                                            <---------GLK1(1)                      <-              --------->RAP2.6(2)  <---------YAB1           --------->GLK1(1)                      --      ---------->DOF2       --------->LBD16                <---------AGP1                          <-    ------>ZmHOX2a(2)    ------->GAMYB                     <-----------ARR10                       --  --------->ARR14(2)     ==================================================MYC_MYB                 -- <------ZmHOX2a(1)    <-----------GT1                      --------->ARR11(3)                      <- ------>RAV1(1)--------->LBD16 <---------At4g35610         <---------ARR14(2)                      -- >ANAC46      --------->RAP2.3(2)  <---------MYB52(1)      --------->ARR14(2)                    <--- >MYB46(3)   --------->RAP2.3(1)<-----------------AGL3     <---------ARR11(3)           <---------YAB1   acaggatcgaaagaagccgcaaaataaccccagagctgttattggctatagaaaactcaaggatctcacttgtcgtcttctctaaaaactatgcttcttc  9560400          --------->At4g35610     <---------MYB46(3) --------->ALFIN1 ------>MYC4 -------MYC3                                                                           ------>ZmHOX2a(1) -------PIF5                                                                         ------>ZmHOX2a(2) -------MYC4                                                                         --------->HSFC1(2) ------>PIF5                                                                         <---------HSFC1(2) ------>MYC2                                                                       --------->ARR14(2) ------>MYC3                                                                       --------->ARR11(3) -------MYC2                                                                       <---------ARR11(3) --------PIF3(3)                                                                 ----------->ARR10 ------->ANAC46                         --------->YAB1            ------>ZmHOX2a(1)<---------ARR14(2) --------O2               --------->CCA1(2)                       =========================HOX2a_HOX2a ------->O2               <------ZmHOX2a(2)                       ==========================HOX2a_HOX2a ------->TGA1a           --------->ARR11(3)                <---------YAB1   ---------->DOF2 --------TGA1a           <---------ARR14(2)              ----------->GT1 <---------HSFB2a(2) ------->PIF3(3)         <---------ARR11(3)        ======================HOX2a_HOX2a<------ZmHOX2a(2) ------ALFIN1            --------->ARR14(2)        <------ZmHOX2a(2)     --------->HSFB2a(2) <-------   cacgtggtgcttagatgaattggtgaagatccaagagtgctatgagaaattggatcaaatggtgattcctattttctacaaagtagatccttctcatgtt  9560500                                  ----------->ARR10                              <---------LBD16                    <---------AtLEC2<-----------------------TaNAC69(2)                    <---------ANAC58--------->ARR14(2)                           --------->At4g35610                    <---------ANAC58<---------ARR14(2)      --------->YAB1       <---------ZAT2      --------->MYB52(1)   <----------DOF2         --------->ZAT14            <---------ANAC58 --YAB1  --------->LBD16<---------ARR11(3)         <---------ZAT14            <---------ANAC58      <   agaaaacagaccggagagtttggcatggtctttggggagacctgcaagggcagaacagagaatgagaagcgaaaatggatgcgagctctagcagaggtag  9560600                                                                      <---------AHL20(2)                                                                      <---------YAB1                                                                  --------->AHL20(2)                   <---------LBD16                                <---------AHL20(2)                <------ZmHOX2a(2)                               <---------AHL20(2)               --------->ARR14(3)                               --------->AHL20(2)               <-----------ARR10                              --------->AHL20(2)               <xxxxx               <---------ARR14(3)                             <---------AHL20(2)               <-----               --------->ARR11(3)                           --------->AHL20(2)            <---------ZAT6               <---------ARR14(2)                           <---------AHL20(2)      <---------MYB46(3)               --------->ARR14(2)                         <---------AHL20(2)       <---------TOE1(2)               <---------ARR11(3)                         --------->AHL20(2)      <---------MYB52(1)-             ----------->ARR10 <-----------RAV1(1)      <---------AHL20(2)       <-------GAMYB<xxxxxx         <------NtERF2      <---------MYB52(1)          --------->AHL20(2)      <---------ANAC58   <x        --------->LBD16<---------ARR14(2)             <---------AHL20(2)        <---------ANAC46  <--      <---------LBD16  --------->ARR14(2)             --------->AHL20(2)        <---------ANAC58----- -----------ARR10------>ZmHOX2a(2)                --------->AHL20(2)  --------->AHL20(2)  -----------   cacatctagccggagaagatcttcggaactggtatgttgttgtttttttagtttatatatatatatatatatataattagtttcgttggatagtgtaaca  9560700  Previous    Next  AGI:  At4g16990.1    Description:  disease resistance protein (TIR-NBS class), putative. similar to SNC1 (SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1) [Arabidopsis thaliana] (TAIR:AT4G16890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16295.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591) Range:  from: 9560154    to: 9565472    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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