Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->LBD16                                                   --------->RAP2.6(2)                                                   --------->ANAC58                                                   --------->ANAC58                                                   --------->ANAC46 ---->YAB1                            ----------->HVH21              ----------->GT1            <---- ---->TOE1(3)          --------->GLK1(2)    ------>MYB46(1)      <---------AHL20(2)     --------->HSFB2a(2) ---->TOE2(3)          <---------ARR14(2)   ------>MYB83        --------->AHL20(2)      <---------HSFB2a(2) ----YAB1             <---------GLK1(2)   <---------MYB59    --------->At4g35610  <-----------GT1   ataaataacccaaaattgagaagagaatctctatgtaagtgtgacctactaaaccgcaatatcagataaaattgcaaaaacttagtacctctcgaatgct  9555400                  ====================================HOX2a_HOX2a                  ------>ZmHOX2a(2)                --------->ARR14(2)                <---------ARR14(2)            <---------LBD16          <------ZmHOX2a(2)         <---------ARR11(3)         --------->ARR11(3)                                                     --------->At4g35610         --------->ARR14(3)                                                     <---------At4g35610        --------->GLK1(1)                                     <-----------RAV1(2)--------->ALFIN1        <---------GLK1(1)                      ------>ZmHOX2a(1)              <------NtERF2 <---------ANAC58 <-------TEIL                 --------->AtLEC2               --------->ATERF1(1) <---------ANAC46=====================================HOX2a_HOX2a    <-----------ARR10 <---------ANAC58<------ZmHOX2a(2)  --------->ANAC46<---------ARR14(2)       --------->LBD16 ------DOF2------>ZmHOX2a(2)      --------->ZAT6    --------->ARR14(2)     <---------LBD16   <-------   ttagcgtgagagatctcggatccataaactgttctaacacaacattttcctgcaaatccaaactacaggcgaaactagccggagcggagggagactcagg  9555500                                                                 ----------->HVH21                                                             <---------CCA1(1)                                                             <---------RVE1(1)                                                            --------->AHL20(1)                                                            <---------AHL20(1)                        --------->HSFB2a(2)                 <---------ARR11(3)                        <---------HSFB2a(2)                 --------->ARR11(3)              ---------              --------->ANAC58                             --------->YAB1          --------->TOE1(2)              --------->ANAC58                     =================================HOX2a_HOX2a <----            --------->ZAT14           ====================HOX2a_HOX2a             <---------HSFB2a(1)       <---------At5g28300            <------ZmHOX2a(1)   ----------->ARR10      --------->GLK1(2)  < ----RAV1(2)---------->DOF2  ----------->GT1       ------>ZmHOX2a(2)         <------ZmHOX2a(1)  -----   cgagagagtcacagtgaagccatcttcggcaagggaaataggagaattagggatcgagcaaagatatttgacgagattaggagaaccttggaagtatgta  9555600                                                                                                  <--                                                                                                  <--                          <---------HSFB2a(2)                                                     ---                       --------->GLK1(2)                                                         <---             ------>ZmHOX2a(2)                                                                   <---            <------ZmHOX2a(2)                                                              <---------DEAR3(1)           --------->ARR11(3)  <---------WRKY18(1)                                         <---------MYB46(3)           <---------AGP1 --------->HSFB2a(2)                                       <---------TOE1(3)       ---------->DOF2<---------ARR14(2)                                   <---------YAB1 <------NtERF2 ------>AtSPL8        <---------GLK1(2)                                  <---------At4g35610     <--- -----ZAT18<---------ARR11(3) ----------->HVH21<------ZmHOX2a(1)         --------->At4g35610<-------GAMYB ----------DOF2       --------->ARR14(2)   --------->TOE1(2)         --------->AtLEC2   <---------DEAR3(1) ---->ZAT18--------->AGP1<---------LBD16---------->DOF2        ---------->DOF2      <---------TOE2(3)   cactttgaagaaagatctataacagattctggatgaccagaagaaagtaggagacgagataactcaaaagcatgcagatgatagttaaggtcgtcgttgc  9555700                                                                    --------->LBD16                                                                   <---------ANAC58      <---------AtMYB61              ------>NtERF2                 <---------ANAC46             <---- -------SPL7                         --------->LBD16               <---------ANAC58             ----- -------RAP2.6(3)                  <---------LBD16              <---------ARR14(2)              ----- --->NtERF2                <---------At4g35610              <---------LBD16                 --------- ------ANAC58              --------->At4g35610          --------->WRKY12                   ---------- ------ANAC46          <---------KAN4(2)                ----------->HVH21   ----------->HVH21   ----- ------ANAC58        <------ZmHOX2a(1)        <---------GLK1(1) --------->ARR14(2)         <---------ANAC46   cgtctgaattggtgggactaagaggaatgagctctcttccggctgtagaattctcgagttgacgcggttccgagttttctgacattgcaaatgctgtgaa  9555800                                                                                      --------->ANAC55(2)                                                                                      <---------ANAC58                                                                                      <---------ANAC46                                                                                      <---------ANAC55(2)                                                                                      <---------ANAC55(1)                                                                                      <---------ANAC58                                                                                     <-------TEIL                                                                               --------->ALFIN1                                                                              <-------MYC2                                                                              <-------MYC3                                                                              ------->PIF4                                                                              ------->MYC2                                                                              <-------PIF4                                                                              ------->MYC3                                                                              <-------PIF5                                                                              ------->PIF5   *TSS                                                                      --------->TGA1a -----ARR14(2)                                  <------NtERF2                <---------TGA1a ---->ARR14(2)                             <---------LBD16                  ------------>OsbHLH66 ---->GLK1(2)                             --------->ALFIN1                 <------------OsbHLH66 >At5g28300                             --------->CCA1(2)      --------->At4g35610 <---------SPL7 ->GT1                          --------->GLK1(2)             --------->ALFIN1<-------MYC4 -->TEIL        --------->GLK1(2)    <---------TOE2(3)       <------ZmHOX2a(1)------->MYC4   tctgagggagagagagagaagctagggatttgagaatttgagatttggggggcaaatggagaaggagcgggagaatggcacgtgcggtacgtgtgatgtt  9555900                                                            <---------RAP2.6(2)                                               --------->At4g35610                    --------->AHL20(2)         <---------At4g35610           --------------->AtSPL8              ----------->RAV1(2)           <---------------AtSPL8              --------->ZAT2         <---------ANAC46        <---------ARR14(2)                     <---------ZAT2         <---------ANAC58        --------->ARR14(2)                    ------>NtERF2<---------At5g28300        --------->ARR11(3)                   <-----------RAV1(2)      <---------ANAC58       <------ZmHOX2a(1)                     <---------ATERF1(2) <------NtERF2         --------->AHL20(2)    <---------HSFB2a(2)             <---------CCA1(2)      --------->RAP2.6(3)         <---------AHL20(2)    --------->HSFB2a(2)        <---------At4g35610    --------->AHL20(2)   <---------REM1(2)   <---------ANAC46 <---------AHL20(2)  <----------DOF2   <-----------GT1--------->ETT(2)   ttgtttcgaggattttgtacataaaaatgttcccgctcatttctttgccagctggattatttacggcctcatgcgtctacaggcccattttaaatgagcc  9556000                                                           -------->ATHB1                                                           --------->AHL20(2)                                                           --------->ATHB51                                                          --------->ICU4                   <---------WOX13(1)                     <---------ATHB51                       <---                 --------->ATHB12            --------->HSFB2a(2)     ----------->GT1            -----     <---------LBD16                         <---------HSFB2a(2)   <---------ARR11(3)           <----    <---------ANAC46 --------->ATHB12    --------->ICU4   <---------ATHB12                      <----   catatagcctggaaatgtttcattgattgtagtcttgtagataatttttagaacaatgcaattattcaagatgctaaaacttgctgcatttcgaactata  9556100                                    ------>MYB83                                    ------>MYB46(1)                                 --------->ANAC55(2)                                 <---------ANAC55(2)                            <---------MYB46(3)                        --------->ATHB12                        -------->ATHB1                        --------->ATHB51                                       <----------ID1                       <---------YAB1                                          ----------->GT1                     <---------------AGL15                                 ---------->DOF2      <-----------GT1--------------->AGL15                      --------->AHL20(2) ------AHL20(2)     <-----------------AGL3                      <---------AHL20(2) ---->AHL20(1)      ----------------->AGL3          --------->HSFB2a(2) --------->ANAC58 -----ARR11(3)      <---------YAB1<---------MYB59   <---------HSFC1(1)  --------->AtLEC2     <-------TEIL -----AHL20(1)      <-----------------AGL2          <---------HSFB2a(2) --------->ANAC58   <---------GLK1(1)   tatttgaataaccttctcaaatactattattggttacctaatgtttttgatgctctagaagttcaatttataacatgcaaagagaaaaactggagttcat  9556200                                                                <-------TEIL                                                               --------->AtLEC2                                                            <-------TEIL                                                       <---------AHL20(2)                        <---                                                       --------->AHL20(2)                        ----                                                     --------->AHL20(2)                <-------GAMYB             --------->TOE2(3)                      <---------AHL20(1)                <---------MYB46(3)          ----------->RAV1(1)                       --------->AHL20(1)                <------MYB83  --------->HSFB2a(2)                          --------->AHL20(2)                     ----------->GT1  <---------HSFB2a(2)             ---------->DOF2  --------->AHL20(2)<---------AtLEC2 <------MYB46(1)   ggttacagaaaacaacattagtcgtcaatttcaaatgaaagtaatcccataaaatatatatatacatgcatgcatgactatgtatggatggttatatcat  9556300  Previous    Next  AGI:  At4g16970.1    Description:  kinase. similar to casein kinase II alpha chain, putative [Arabidopsis thaliana] (TAIR:AT2G23070.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83359.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 9551447    to: 9555803    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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