Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               ---------->DOF2     ----                                                                           <---------YAB1       -----                                                                          --------->TOE2(3)     -----                                                                         <---------ICU4     ------>ZmHOX2a(2)                                                                         --------->YAB1   <---------ARR14(2)                                                                   --------->TOE2(3)      --------->ARR14(2)        <---------DEAR3(2)                                         <---------MYB59        --------->ARR11(3) <---------GLK1(2)                      <---------ANAC46       --------->WRKY12           <---------AGP1 --------->ARR14(2)              <------ZmHOX2a(2)             ----------->HVH21          <---------- <---------ARR14(2)            <------ZmHOX2a(1)        --------->YAB1   --------->ATHB12 <---------ARR11(3) ----DOF2<---------MYB52(1)--------->LBD16              <-----------GT1 <---------ATHB12 <---------CCA1(2)   ccaaattcgccggtctgttttctaacttccgaaggatcaacgtcgtagaaaactggaatcaccatttgacctaaatcattaaagcacttgtggatctcaa  9544100                                                            ------>ZmHOX2a(1)                                                        <---------ARR14(2)                                                        --------->ARR14(2)                                                        --------->AGP1                                                        --------->ARR11(3)                                                        <---------ARR11(3)                                                       <---------GLK1(1)                                                 --------->ATHB12                                                <---------YAB1          --------->MYB46(3)          < ----->MYB46(3)  ------->MYC3                ----------->TGA1<---------TOE1(2)                 <----- ---->ANAC58     <-------MYC3         --------->HSFB2a(2) ------>ZmHOX2a(2)            ---------->CDC5 ---->ANAC58  <---------ALFIN1        <---------HSFB2a(2)<------ZmHOX2a(2)             <-----------RAV1(2) -ARR10---------->DOF2     --------->YAB1  --------->At4g35610 <---------GLK1(2)    --------->At4g35610   ccaattcatttaagcaccacgttgaagaagcatagttcttagagaagatgacgattgagatcctagcttctctaatcgccgatataagctcaggggcgat  9544200                                                <---------RAP2.6(3)                                                ------>NtERF2                                                <-----------HVH21                                               <---------ANAC46                                   XXX                                      <---------WOX13(1)                                          <--                                    --------->ATHB12                                 <---------ANAC58 <---------RAP2.6(2)               --------->ICU4                                    <---------ANAC58 <---------DEAR3(1)                <---------YAB1<------NtERF2              --------->ARR14(2)  ----- ---------LBD16              ------->TEIL    <---------At5g28300            <---------ARR14(2) ------ --GAMYB               ------>ZmHOX2a(2)--------->ATHB12                   <------ZmHOX2a(1)  -------   tgtgcggcttctctcgattccatgatcgatgaatgtattgattgatttgccgtcgagcgcctcgattagatggctgaggaacgtcttgcgaacatcaacc  9544300                                                    <------NtERF2                                                   ------>NtERF2                                                   <---------RAP2.6(3)                                                  --------->DEAR3(1)                                                  --------->RAP2.3(2)                                                  --------->RAP2.3(3)                                  --------->HSFB2a(2)                       --------->GLK1(1)          --------->RAP2.6(2)                       <---------GLK1(1)          --------->ANAC46                      <-----------ARR10          --------->ERF1                      --------->ARR14(2)         --------->ATERF1(1)                      <---------ARR11(1)         --------->RAP2.3(1)                      <---------ARR14(2)        <---------ATERF1(1)                          <------- XXXXXXXXXXXXXXXXXX>MIR853        <---------HSFB2a(2)                                       <-------- -------ALFIN1        ------->TEIL<---------------AGL15       <---------YAB1                <-------- -->GAMYB            <---------ARR14(1)    >>>>>>>>>TBF1    --------->At4g35610             --------- --->ANAC46          <---------CCA1(2)  >>>>>>>>>TBF1       <---------At4g35610           ----------- ->P     ----------->GT1     <---------MYB52(1) --------->At4g35610                  --------->CCA1(2)   ccactgaagcttggaaaaacgtcgtatctccgtctgccagaagaagaagaagccgccatgggagatgatagagagaactcagagaagagacgaagatttt  9544400                                                                                                   <-                                                                                                -----                                                                                              <------                                                                                              <------                                                                                             --------                                           <---------HSFB2a(1)                               <-------    ----------->GT1                        --------->HSFC1(2)                                <------- --RVE1(1)                                 --------->HSFB2a(1)                               <------- -GLK1(2)               <---------ZAT6     <---------HSFC1(2)                         *TSS   -------- -ARR11(3)      --------->ANAC58      <------ZmHOX2a(1)                               --------->ZAT14 >ARR11(3)      --------->ANAC58     ----------->GT1                                  <---------ZAT14 >ARR10 --------->WOX13(1)    ---------->DOF2                          <---------AtLEC2      --------   taagagaagtaaatcagcaagacatagtgtgagaaagagaggagaaacttcgtcttccttccctccaagacttgcatagaagacttactgtacaagatat  9544500       ----------->GT1                    --------->ANAC58 ---------DOF2                            --------->ANAC55(2) ---->GLK1(2)                             --------->ANAC58 ---RVE1(1)                               ----------->GT1 ---CCA1(1)                               <---------ANAC46                          <----------DOF2 ->ARR14(3)                     ------------>CBF        <---------GLK1(2)      ---------->DOF2 --ARR14(2)                   --------->ANAC58   --------->YAB1             ------>ZmHOX2a(1)-------- --ARR14(3)                   --------->ANAC58  <---------AHL20(2)          --------->HSFB2a(2) --ARR11(3)              ------>ZmHOX2a(1)<---------ANAC55(2)  ------>NtERF2--------->LBD16--------->ZAT6 ->ARR14(2)        --------->ARR14(2)    <-----------------------TaNAC69(2) <---------HSFB2a(2) ->ARR11(3)       <---------CCA1(2)<------------CBF ---------->DOF2    <----------DOF2   <-----------GT1   tcttttaagtggctaaaatcaaatctcctaacaagacaattgagacgtaaataataaagaaactcggcccttcctttcctcgaaagcttttttacactac  9544600      <---------RVE1(1)      <---------CCA1(1)     --------->ARR11(3)                     <---------ICU4                          <-----------GT1     <---------ARR11(3)                    --------->ICU4                      --------->YAB1     --------->AHL20(1)           <-----------HVH21                            --------->AHL20(2)     <---------AHL20(1)        <-------GAMYB--------->YAB1               ----------->GT1    --------->YAB1            <---------MYB46(3)                     --------->ANAC58          ------ ---------->DOF2           <-----------RAV1(1) --------->YAB1        --------->ANAC46        <------- ->ANAC46      <---------YAB1<---------TOE2(3)<---------YAB1         --------->ANAC58        --------   atacaaagatatttttgaagattgaatttttgtggttgtcactgaattatgataagtcttagtctttgtacaagacagaaataatatttcaatttctagg  9544700                                    <---------CCA1(1)                                    <---------RVE1(1)                                   --------->ARR11(3)                                   --------->AHL20(1)                                   <---------ARR11(3)                                   <---------AHL20(1)                                  --------->YAB1                             <---------REM1(2)                          ------>ZmHOX2a(1)                        --------->At4g35610        <---------GLK1(2) <---------------AGL15             <-------GAMYB        --------->ANAC46 --->ANAC46           <---------ARR14(2)                   <---------MYB46(3)    --------->ANAC58 --HSFB2a(2)          --------->ARR14(2)                  <---------TOE2(3)      --------->ANAC58 ->HSFB2a(2)      <-------TEIL ---------->DOF2            ---------->ID1  ------>ZmHOX2a(1) ---------   caagtagacagaaacttacattcgtttcctctacaaagatattttgaaaacacaaattttgtggttatcagttgtccttgtacaagacagtttatcgtaa  9544800                                                                                        <---------YAB1                 <---------ARR11(3)                                                     <---------AHL20(2)                 <-----------ARR10                                                     <---------AHL20(2)                 --------->ARR11(3)                                                    --------->AHL20(2)        <---------WOX13(1)                                                          --------->ARR14(2)       >>>>>>>>>ARR1                                                                <---------ARR14(2)       >>>>>>>>>ARR2                                                                <---------ARR11(3)     <---------YAB1                                                                <------ZmHOX2a(1)     --------->ICU4                       <-------TEIL     <------ZmHOX2a(1)   <---------YAB1 >YAB1--------->ATHB12        <-----------GT1--------->AtLEC2                --------->YAB1   gaatgttatgattgtttaatatctaagtcttgtttccctatacatacatgcacacggtttaggagaataagtatatcgattatgaggattttaattcaaa  9544900                                                                                                  <--                                                                                                 <---                           --------->ZAT6                                         <---------TOE2(3)                     --------->ZAT6                                       <---------YAB1         <---               <---------ICU4                                           <--------HAHB4    <---------ANAC58              --------->ICU4                      <----------DOF2      <---------YAB1     <---------ANAC58   ----------->GT1 <-----------GT1           <-----------GT1       ----------->GT1<---------TOE1(3)--   taatacagtgaaaatactaattaacactaactctctagtttgctaaattactcttttagttttcaagaattgtattattagtttaaagtttggcttagtg  9545000  Previous    Next  AGI:  At4g16950.1    Description:  RPP5 (RECOGNITION OF PERONOSPORA PARASITICA 5). similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G16920.1); similar to SNC1 (SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1) [Arabidopsis thaliana] (TAIR:AT4G16890.1); similar to RPP4 (RECOGNITION OF PERONOSPORA PARASITICA 4) [Arabidopsis thaliana] (TAIR:AT4G16860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70119.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains Range:  from: 9538817    to: 9544486    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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