Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      ------>ZmHOX2a(2)             --------->LBD16                                         --------->GLK1(1)    ===========================HOX2a_HOX2a                                                <---------GLK1(1)   <------ZmHOX2a(2)             --------->DEAR3(1)                                      --------->ARR11(3)   ============================HOX2a_HOX2a                                               <---------ARR11(3)  --------->ARR14(2)             <---------ANAC46                                        <-----------ARR10  <---------ARR14(2)           ------->GAMYB                                             --------->ARR14(2) -------->DEAR3(1)            --------->DEAR3(1)                                         <---------ARR14(2) -----NtERF2               <---------WRKY12      --------->YAB1                          <---------AGP1 --->NtERF2                <---------WRKY38(1)   <-----------GT1          ------>ZmHOX2a(1)------>ZmHOX2a(2) -->ANAC58                <------ZmHOX2a(2) --------->LBD16               ========================HOX2a_HOX2a -->ANAC58               <-----------ARR10<---------LBD16   =====================HOX2a_HOX2a -->ANAC46              <------ZmHOX2a(1)--------->MYB52(1) ------>ZmHOX2a(2)----------->HVH21   ---- ->DOF2        --------->YAB1 --------->ANAC46--------->ARR14(2)       ---------->ID1   <---------CCA1(2)   caccgatctgttttctaacatgagaaggatcaacgccgtagaaaaccggaatcaccatttgatccaagtctttgtccttgtgacacttgtggatctccac  9537400                 --------->ALFIN1                ------->MYC4                <-------MYC3                <-------MYC2                ------->MYC3                <-------MYC4                <-------PIF5                ------->MYC2                ------->PIF5               --------->TGA1a               <---------TGA1a                             ------>ZmHOX2a(1)               --------->O2                              ------>ZmHOX2a(2)               <---------O2                             <------ZmHOX2a(2)               <---------PIF3(3)                       <---------GLK1(2)               --------->PIF3(3)                       --------->AGP1             <---------ALFIN1                          <---------ARR14(2)         --------->MYB46(3)                            --------->ARR14(2)        --------->ANAC58                               <---------ARR11(3)        --------->ANAC46                               --------->ARR11(3)             ---------->CDC5        --------->ANAC58                              <---------GLK1(1)      <---------MYB52(1)------      ---------->DOF2     --------->YAB1             ----------->ARR10      <---------RAP2.6(3)<-----      ===================bZIP_DOF              <---------YAB1               <-------GAMYB<---------DEAR3(1) ----->AtMYB61 <---------ANAC46            <---------ARR11(3)              <---------MYB46(3)  ------   caattcattcaagcaccacgtggaagaagcatagttctcagagaagataactattgagatcctcgcttctctaatggccgttataagctcatcggcgatt  9537500                  ----------->HVH21                 --------->LBD16                <---------ANAC55(1)              --------->ETT(2)                --------->ANAC55(2)              <---------ETT(2)   <---------GLK1(2)                           <-----------HVH21  --------->At4g35610                       --------->At4g35610                               -------  <---------ZAT2<---------ANAC46     <---------WOX13(1)                                  <-----------ARR10  <---------At4g35610 ------>ZmHOX2a(2)   ------>ZmHOX2a(2)                              <---------ARR11(3) ------->TEIL   <---------ANAC55(2)--------->ATHB12                                      --------->ARR11(3) --->ARR14(2)   <---------ANAC58  <---------YAB1--------->ALFIN1             <---------HSFB2a(1) ----ARR14(2)   <---------ANAC58  --------->ICU4--------->WRKY18(1)          --------->HSFB2a(1) <--- --->ICU4     ------>NtERF2 ------->TEIL <---------At4g35610              <------ZmHOX2a(1)  --------   atgcagcttctcacgatgccgtgatccatgaatgtattgattgatctgcggtcgagcgcctcgattagatggctgaggaacgttttgcgaacatctaccc  9537600                                                                                          <-------GAMYB                                                                                        <---------AtMYB61                                                                                       <-------GAMYB                                                                                       <---------MYB52(1)                                                                                      <---------DEAR3(2)                                                                                      <------MYB46(1)                                                                                     <---------DEAR3(1)                                                                                     <---------DREB2C(2)                                                                                     <---------DEAR4(1)                                                                                     --------->MYB55(2)                                    <------ZmHOX2a(1)                                --------->MYB111(2)                                 --------->HSFB2a(2)                                 <---------MYB46(3)                           --------->LBD16                                       <---------AtMYB61                           ------>NtERF2                                      <---------ANAC46                         <---------LBD16                                   --------->ALFIN1 <--------                      <---------GLK1(1)                                  <---------ANAC46--------->MYB55(2)                      --------->GLK1(1)                                  <---------ANAC58<---------MYB46(3)                     <-----------ARR10                                   <---------ANAC58--------->MYB52(2)                     <---------ARR11(1)            >>>>>>>>>TBF1        --------->ALFIN1--------->ALFIN1                     ------->TEIL<---------HSFB2a(2)  >>>>>>>>>TBF1<-----------RAV1(2)<------MYB83     <---------ANAC58--------->ARR14(2)         >>>>>>>>>TBF1      ---------->CDC5   --------->MYB46(2) -->ANAC46          <---------CCA1(2)        >>>>>>>>>TBF1      --------->At4g35610  --------->MYB111(1) ------ALFIN1       <---------ARR14(1)    >>>>>>>>>TBF1         <---------At4g35610 <---------ORA47(1) >P  <---------ANAC58<---------ARR14(2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->ALFIN1   cactgaagcttgggaaaacgtcgtatctccggctactaggagaagaagaagaagaagaagaagatgagctcagggtcgtggtggaggtcggtggttgtgg  9537700     --------->ALFIN1                            <---------At4g35610    <---------ANAC46                             --------->At4g35610   <---------ANAC58                          <---------AtMYB61                                 ------   <------MYB46(1)                           --------->ALFIN1                                  ------   <---------ANAC58                          <---------DEAR3(1)                                ------   <------MYB83                            <---------bZIP60(2)                              ---------  <---------MYB46(3)                      <---------AtMYB61                                <------ZmHOX2a(1)  --------->MYB55(2)                   <----------CDC5                                 <---------ZAT14 --------->ALFIN1                     <---------At4g35610                    <-----------GT1<-------- -MYB46(3)    --------->ALFIN1    <-----------RAV1(1)              <-----------GT1    --------->ALFIN1   ccagtgggtgggaagggtggaagctagtttgtatgtatggggctgaggtggtgctgagttatgttgtaatcactgttttttactctgagtgtaggaaacg  9537800                         <---------At4g35610                       <---------ANAC46 --->ANAC46           <---------At4g35610          <-----------RAV1(1) --->ANAC58       <-----------RAV1(1)   <---------AHL20(2) --->ANAC58       <---------MYB46(3)  <-----------TBP <---------MYB46(3)             <-------TEIL >ARR14(2)      <------------CBF<--------P    <---------DAG2                 ----------->GT1 -ARR14(2)   ------------>CBF<---------TOE2(3)<----------DOF2              <------------CBF   ccatggtagcagtgatgcaattgttgctgatgaggttgctatttaaaacttttttgttgttgatagttctcttgtgaaattgtgaaatacatttttgttt  9537900                      <----------DOF2                      --------------->AGL15                      <---------------AGL15                 <------------CBF                <---------ICU4                --------->ATHB12 <------ZmHOX2a(1)        --------->CCA1(2)            <---------AHL20(2)  ----------->GT1          <---------ARR11(3)      <-------GAMYB           --------->AHL20(2)  ----------->GT1<---------ANAC58         ------->GAMYB                -        --------->ATHB12 ---------->DOF2      <---------ANAC58        --------->MYB46(3)          <--       <---------YAB1<---------ANAC58         <---------ANAC46       <---------At4g35610 <-----------GT1   <---------GLK1(2) <---------ANAC58  <-----------GT1   --------->ARR11(3)     ----------->GT1<-----   accaagattatgatttattcattgctttaaagagaggaaaataacatttcgtagagagagatatgtgtttcaacagacaagactgttatattcacatctt  9538000                                                                           ---------->DOF2                                                                       <---------------AGL15                                                                       --------------->AGL15                                                                       --------->YAB1                                                                       --------->TOE2(3)                                                                       --------->TOE1(3) <-----------HVH21                                                                      <-----------------AGL3      <---------------------WRI1                                      ----------------->AGL3 <------ZmHOX2a(1)                                               --------->ANAC58     <---------At4g35610 -------->LBD16       --------->ANAC58                     <---------HSFB2a(2)        --------->At4g35610 ---------RAV1(2)     --------->ANAC58         <---------ZAT18   --------->ANAC58     --------->ZAT2 -----DOF2       ---------->DOF2   ----------->GT1         --------->HSFB2a(2)----------->GT1   tcaggagaagcgaaattttcaaagaagcaaaacagagaagtaagaatagagtacttctgttctggacatggaaccataaaaggtttctagctgtcagtaa  9538100                             <---------ANAC58                         <---------ANAC46                                                    <-------                         <---------ANAC58                                                  <---------ICU4                         <---------ANAC58                                                 --------->ICU4               <------ZmHOX2a(1)                                               <------ZmHOX2a(2)            <-----------RAV1(2)                                  --------->ZAT14       <-------TEIL        --------->At4g35610  <---------ANAC46                    <---------ZAT14   <---------TOE1(2)        <---------At4g35610  <---------ANAC58         <---------YAB1          <---------ARR14(2)   gtgttccatcatctgcaggagaaaatggcttgtgtgaaaaactaagaaatcgtcttgtcattaccagtatagtcatggtcgatcccatgttcattatgaa  9538200                                                                          --------->TOE1(3)                                                                  ---------->DOF2                                                                 <------ZmHOX2a(1)                                                               --------->LBD16                                                              <---------LBD16                                                             ------>ZmHOX2a(2)                        <---------DAG2                     <---------ARR14(2)                        --------->TOE2(3)                  --------->ARR14(2)                        --------->TOE1(3)                 <------ZmHOX2a(1)                  --------->At4g35610                   <---------TOE1(3) --------->TOE2(3)                  <---------At4g35610                   <---------TOE2(3) --------->YAB1                  --------->ANAC46                <---------RAP2.6(2)   --------->GLK1(2)                <-----------RAV1(2)               <---------DEAR3(1)   <---------GLK1(2)              <-----------HVH21                  --------->RAP2.6(3)--------->ANAC58           --------->ANAC55(2)                   --------->ATERF1(1)--------->ANAC58     ----------------------->TaNAC69(2)      --------->REM1(2)<-----------RAV1(2)         -----------    ----------->GT1<-----------HVH21        --------->ALFIN1<------ZmHOX2a(2)             <---------ANAC46 --YAB1    <---------ANAC55(2)          --------->At4g35610--------->ARR11(3)          <---------AtMYB61   acagagttgtaatacgtttcaggtcaccttaacaatgtgataagctgtggagacggctaaggatccaggaaaggaatcttaacaatgtgatggtgtgaat  9538300  Previous    Next  AGI:  At4g16940.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to SNC1 (SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1) [Arabidopsis thaliana] (TAIR:AT4G16890.1); similar to RPP4 (RECOGNITION OF PERONOSPORA PARASITICA 4) [Arabidopsis thaliana] (TAIR:AT4G16860.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G16960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70119.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593) Range:  from: 9533168    to: 9537804    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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