Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->LBD16          ------>NtERF2        <---------LBD16   ------>ZmHOX2a(2)  <------ZmHOX2a(2) --------->ARR14(2) <---------ARR11(3) <---------ARR14(3)                                                       ------>ZmHOX2a(1) --------->ARR11(3)                                           ------>ZmHOX2a(1) --------->ARR14(3)                                         =====================HOX2a_HOX2a <-----------ARR10                                          ------>ZmHOX2a(2) <---------ARR14(2)                             <----------DOF2    <----------DOF2 <----------DOF2 --------->ARR10                    <---------ANAC58      --------->ARR14(2)   <---------CCA1(2) --MYB52(1)  <----------DOF2        <---------ANAC58      <---------ARR14(2)  <---------TOE1(2)   gaagatcttctccggctatatttgttatgtctactagagcttgcatccatctttgtttctgatcctcttctttgtcctcgcatgtctttttaaaaacatc  9516200                                                                                                  ---                                                                                                 ----                                                                              ---------->DOF2    ----                                                                          <--------HAHB4     ------>ZmHOX2a(2)                                                                          --------->ATHB12 --------->ARR14(2)                                                                          --------->YAB1   <---------AGP1          <---------MYB52(1)             <---------ANAC46                 <---------ICU4   <---------ARR14(2)         <---------DEAR3(2)              ----------->GT1               --------->WOX13(1)  <---------  <---------GLK1(2)               <------ZmHOX2a(2)             --------->WRKY38(1)        <---------ARR11(3)  <---------ARR14(2)            <------ZmHOX2a(1)               --------->WRKY12           --------->ARR11(3)  --------->ARR14(2)        --------->LBD16              <-----------GT1 <---------ATHB12 <---------CCA1(2)   gccaaattcgccggtctgttttctaacttccgaaggatcaacgtcgtaaaaaactgaaatcaccaattgaccccaatcatttaagcgattgtggatctca  9516300                                                            <---------ANAC58                                                            <---------ANAC58                                                         <---------ARR11(3)                                                         --------->ARR14(2)                                                         --------->AGP1                             <                                                         --------->ARR11(3)                         <                                                         <---------ARR14(2)                         <                                                        <---------GLK1(1)                          <-           --------->MYB46(3)                     --------->ATHB12                               <---          --------->ANAC46                       <---------YAB1                                 <----          --------->ANAC58                    <------ZmHOX2a(2)                          ------------ ------>MYB46(3)                             --------->ARR11(3) <---------ANAC58        <-----------RAV1(2) ----->ANAC58                          <---------HSFB2a(2) ------>ZmHOX2a(2)            ---------->CDC5 ----->ANAC58      --------->ALFIN1    --------->HSFB2a(2)<------ZmHOX2a(2)          --------->At4g35610 --ARR10  --------->ANAC58  --------->YAB1   <---------ARR11(3) <---------ANAC58     <---------At4g35610   accaattcatccaagcaccaagtggaagaagcatagttcttagagaagatcacgattgagatccttgcttctctaatcgctgatattagctcaggggcta  9516400            --------->MYB52(2)  <---------RAP2.6(2)                                  --------->ANAC58 --------->SPL7                                  <-----------HVH21                         <--------- <<<<<<<<SPL4                          <---------WOX13(1)                             <---------ANAC58 <<<<<<<<SPL5                        --------->ATHB12  --------->ANAC58      --------->ARR14(2)    <- <<<<<<<<SPL1                       <---------YAB1    --------->SPL7         <---------ARR14(2) ----- --------SPL7   ------>NtERF2 ------->TEIL    --------->At4g35610           <------ZmHOX2a(1)  ------ ------------AtSPL3   <---------ARR11(3)    ------>ZmHOX2a(2)         --------->At4g35610  <---------ARR11(3) --------------SPL14--------->ICU4  --------->ICU4  <---------SPL7    <---------At4g35610  --------->ARR11(3) ----------->TaNAC69(2) ------>ZmHOX2a(2)  <---------At4g35610      <---------WOX13(1)<---------ANAC58   ttgtacggcttcgttcgatgccatgatccatgaatgtattgattgatctgcggtcgaacgcctcgagtagattgctgaggaacgtcttgcgaacatctac  9516500                                                     <------NtERF2                                                    <---------RAP2.6(3)                                                    ------>NtERF2                                                   --------->DEAR3(1)                                                   --------->RRTF1(3)                                                   --------->RAP2.3(2)                                                   --------->RAP2.6(2)                                                   --------->RRTF1(2)                                                   --------->DREB2C(2)                                                   --------->RAP2.3(3)                                                   --------->ANAC46                                                   --------->ATERF1(2)                                                   <---------ATERF1(2)                                                  --------->DEAR4(2)                                                  <------NtERF2                                                  --------->ATERF1(1)                                                  --------->RAP2.3(1)                                                  --------->ERF1                                                  --------->RRTF1(1)                                                  --------->ORA47(2)                                                  --------->RAP2.6(1)                                                 --------->DREB2C(1)                                                 <---------DREB2C(1)                                 <------NtERF2   <---------DEAR4(2)                              <---------At4g35610<---------RAP2.3(1)                              --------->At4g35610------>NtERF2                             --------->LBD16     --------->At4g35610                             <---------ATERF1(1) <---------ATERF1(1)                             ------>NtERF2      <---------DEAR3(1)                           <---------LBD16      --------->ANAC46                        --------->GLK1(1)       --------->DEAR3(1)                        <---------GLK1(1)       --------->RAP2.3(2)                           -------                       ------->TEIL             --------->RAP2.6(2)                  --------->At5g28300                       <-----------ARR10       --------->RAP2.3(1)                  ----------->GT1                       <---------ARR14(2)      --------->ATERF1(1)                --------->ZAT18       <---------ANAC58<---------ARR11(1)      --------->DEAR3(2)                 --------->ZAT14 --ARR10              <---------ARR14(1)       --------->ERF1                     <---------ZAT14 --------ALFIN1       <---------CCA1(2)       --------->At4g35610                 <-------TEIL<------ ---->ANAC46        --------->TOE1(1)         <---------ATERF1(1)     <------ZmHOX2a(1)---------->DOF2 -->P  <---------ANAC58--------->ARR14(2)>>>>>>>>>TBF1         <---------YAB1 <---------------AtSPL8   cccactgaagcttgggaaaacatcgtatctccggctgcaagaagaagaagccgccgccatggaatatgatgaggagaagataagtacagtaaatcgaata  9516600          --------->ATHB12        <---------DEAR3(2)          --------->HSFC1(2)       <------------CBF        ------>NtERF2                  <---------HSFC1(2)      --------->ATHB12        --------->TCP20                 --------->HSFB2a(1)               <----     --------->ICU4        --------->ALFIN1              --------->ANAC58                     -------     <---------YAB1       <-----------HVH21          --------->ANAC58                   --------->ICU4 --------->At5g28300     <---------ZAT6       --------->ALFIN1<---------HSFB2a(1)  --------->ANAC58 -->ARR14(2)         <---------YAB1    ------>ZmHOX2a(1) --------->ANAC58          --------->ANAC58 ---ARR14(2)       --------->ATHB12<---------MYB52(1)--------->ANAC58              --------->ANAC46 <   cacagtgattattgattagagtgattactgtgaggccggtccttaagggtgggatgcgcaaggaaacttcttattttttgcccataggccataaatataa  9516700                              --------->MYB46(3)                           --------->At4g35610                     <---------------AtSPL8                               ------->GAMYB -----AHL20(2)       <---------TOE2(3)           --------->AHL20(2)      --------->MYB46(3) ---->TBP --------->ICU4 <-------TEIL   <---------ATHB12               <-----------GT1 ---------REM1(1)  --------->ICU4   ------------>CBF       --------->GLK1(1)               <---------YAB1   aaatgtagcgaaatgtttgtaatgaggttcgaaccaaggccaatgaagcatttaaaacctgatttcaagtattcaaccgctcaactacaagttatgatgc  9516800                                                   ---------->DOF2                                              ----------->GT1                         --------->GLK1(1)                                            <------------CBF                          <---------GLK1(1)                  <---------AHL20(2)     <---------ANAC58                     <---------ANAC58                 --------->AHL20(2)      <---------ANAC58        --------->YAB1 --------->ALFIN1        --------->ICU4               <----------DOF2       <---------At4g35610<---------ANAC46     ------------>CBF             --------->ARR11(3)       --------->At4g35610<---------ANAC58     <-     <---------ATHB12             <---------ARR11(3)   <------ZmHOX2a(1)     --------->ATHB12 <------   ctcttaaatcaatattagatttattttggtgtccaaggtctttgcttattgtaaaaaggacagcttatcgtaaacatgttgagtggggaattcagtcttt  9516900                                                             <---------YAB1                                                             <---------AHL20(2)                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                         --------->ARR14(2)                                                         <---------ARR14(2)                                                         <---------ARR11(3)                                                        <------ZmHOX2a(1)        <---------ZAT6                                                    <---------YAB1             ----------->GT1                                                  <---------ICU4          <---------AHL20(2)                                                  --------->YAB1          --------->YAB1                                                 --------->ICU4           --------->AHL20(2)                        --------->TOE1(2)        <---------ATHB51      --------->YAB1      <--------- ----------GT1 <-------TEIL <------ZmHOX2a(1)  --------->WOX13(1)   --------->ANAC55(2) --------->TOE1(3) ----DOF2     --------->AtLEC2  --------->GLK1(2)<---------ATHB12   --------->ANAC46    --------->TOE2(3)   gtttccctatacttacatgcatagaaactaggagaatttgtaagtatatcaattatgaggattttaattcacataataatatagtgaaaacattaactat  9517000                                                 <---------ANAC58                                                 --------->ALFIN1                                                 <---------ANAC46                                                 <---------ANAC58                                               <---------ANAC58                                               <---------ANAC58                                               <---------ANAC46                                              <---------AtMYB61                                              --------->ALFIN1                                            --------->ALFIN1                                            <---------ANAC58                 --------->HSFC1(1)                                            <---------ANAC46                 <---------HSFB2a(2)                                            <---------ANAC58                 --------->HSFB2a(2)                                          <---------ANAC58                   <---------HSFC1(1)                                          <---------ANAC58               --------->GLK1(1)                                         <---------AtMYB61       <---------ANAC58                                         --------->ALFIN1        <---------ANAC46                                       <---------ANAC46          <---------ANAC58                                       <---------ANAC58        --------->ZAT14                               <---------HSFB2a(2)   <---------AtLEC2   --------->ARR11(3)                               --------->HSFB2a(2) --------->ALFIN1     <---------ARR11(3)     <-----   ----------->GT1         <----------DOF2<---------ANAC46     <---------ZAT14             <--------- --GT1              <----------DOF2    <---------ANAC58       --------->ALFIN1  <---------GLK1(2)   ctagtttgttaaaaaaaaaactcttttagctttctagagttgtgtggtgtggtgtggatggacagtggagtgaagatttctagaaactctctgcgttttg  9517100  Previous    Next  AGI:  At4g16900.1    Description:  ATP binding / protein binding / transmembrane receptor. similar to SNC1 (SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1) [Arabidopsis thaliana] (TAIR:AT4G16890.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G16940.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G16960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70119.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC; (InterPro:IPR002182); c Range:  from: 9511878    to: 9516560    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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