Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->ARR14(2)                           --------->LBD16                         <---------LBD16                       --------->ARR14(2)                       <---------ARR14(2)                      <---------CCA1(2)    --------->At4g35610                      <---------GLK1(1)    --------->ZAT2<---------ANAC58                  --------->ARR11(3)       <---------ZAT2<---------ANAC58          <---------ARR14(2)     <---------ARR14(2)  <---------ANAC58                         <------          --------->ARR14(2)------>NtERF2  <---------At4g35610                                <------    <-----------GT1<------ZmHOX2a(2)     --------->MYB46(3)                                   <------ -------->AHL20(2)<---------ARR11(3)   ----------->RAV1(1)       <----------DOF2   ------------------ ---->ATHB12  --------->LBD16    --------->MYB52(1)  <---------ANAC58          ------>ZmHOX2a(1)   attgaaataccatttccgaagatcatatccggccataactgcaacagctgctagagcttgcttccaactttgtttctcatcctctgatttagccttgcat  9505100         --------->ARR11(3)         <---------ARR11(3)     <---------MYB52(1)     ---------->DOF2      <---------DEAR3(2) ---ANAC58         --------->ARR14(2)                    --------->ALFIN1 ---ANAC58         <---------ARR14(2) <-----------GT1   <-------MYC3      <-----------GT1 ---AtLEC2  <----------DOF2<---------MYB52(1)--------->LBD16      --------->GLK1(2)                -- ----->TaNAC69(2)  <---------GLK1(2) <-----------GT1    ------->MYC3      --------->YAB1   <-------TEIL   gtctcttcaaagacctttccaaattcgccggtctgttttttaacttccgaagcatcaacgtggaagaaaatcggaatcaccatttgattcaaattcgtat  9505200                                                                   --------->ATHB12                                     <---------MYB46(3)           <---------YAB1                                    --------->ALFIN1            <---------DOF5.7(2)        ------->TEIL            <-----------RAV1(2)             --------->MYB52(1)     <---------AHL20(2)        <---------ARR14(2)     <------NtERF2 --------->YAB1   --------->ARR11(3)     <----------DOF2        --------->ARR14(2)    ----------->RAV1(1)       --------->HSFB2a(2)      <---------GLK1(2) ------->ZAT6   --------->AtMYB61 --------->ZAT2        <---------HSFB2a(2)  <-----------GT1       --   aacacttgtgaatctccaccaattcattcaggcaccaggtggatgaagcatagttcttagagaagataacgattgctattctcgattcttttattgccga  9505300                                 ------>ZmHOX2a(2)                          ------>ZmHOX2a(1)                         --------->At4g35610                          ==============HOX2a_HOX2a                 <---------ZAT2                  -                       ------>NtERF2                     <----------DOF2                            <                     --------->ATERF1(1)                <---------ANAC58                            -                    <---------ATERF1(1)                 <---------ANAC58                           <-                   <---------DEAR3(1)                <---------WOX13(1)                           ---         ------>NtERF2--------->ARR14(2)           --------->ATHB12 --------->GLK1(1)           <----       --------->LBD16<---------ARR14(2)          <---------YAB1    <---------At4g35610   <------ZmHOX2a(1)     <---------LBD16<---------RAP2.3(1)        ------->TEIL     <----------CDC5         <---------TOE2(3) -------->DOF2    <---------At4g35610       <---------YAB1     ----------->RAV1(2)     <xxxxxxxxxxxxx   taaaagctccgggccgattgagcggctcctctcgatctcatcatctatgaatgtgattgctttgcccctgagctccttgagaagatggctgaggaatgag  9505400                                                 <---------HSFB2a(2)                                                 --------->HSFB2a(2)                                                ----------------->AGL1                                               ------>NtERF2                                            --------->At4g35610                                            <---------ZAT2                                            --------->ZAT2                                            <---------At4g35610                                           ------>NtERF2                                           --------->LBD16                                           <---------ATERF1(1)               --------->ANAC58          <---------LBD16     --------->ARR11(3)               <---------GLK1(1)     <---------ARR11(3)               --------->GLK1(1) -------->ANAC58                     <---------ARR11(1)                                             < ---------ANAC55(2)  <---------ANAC58------->TEIL<---------------AGL15          --------------------- -------->ANAC58     <---------ANAC58<-----------ARR10                          <----------DOF2<----- --------LBD16 --------->ANAC58      --------->ARR14(2)                       <---------YAB1   <----- ------>MYB52(1) ---------->DOF2     <---------ARR14(2)                  --------->YAB1       <------ -------HVH21 --------->LBD16       <---------ARR14(1)                 <---------ARR11(3)   --------- xxxsmallRNA(i)--------->ANAC46     <---------CCA1(2)  >>>>>>>>>TBF1  <---------CCA1(2)  ------->TEIL   tcacggacatcttctccacgaaagcttgggaaaacgtcgtatctccggctgccagaagaagaagctatctccatatcatcatctttggatgtatccatca  9505500     --------->WRKY18(1) <---------At5g28300 -----------GT1      ----------->HVH21           <---------RAP2.6(3)   <---------HSFB2a(2) <---------At4g35610 >WRI1<---------ETT(2)                 ------------>CBF            --------->ZAT2          --------->At4g35610 ----ICU4<---------ZAT2            --------->ANAC58                <---------At4g35610<-----------GT1 ---HAHB4--------->ZAT2            --------->ANAC58           --------->ANAC46       <---------CCA1(2) ---ATHB12     <---------ZAT2      --------->ANAC46        <---------ZAT14     <------------CBF     < >WOX13(1)     <---------At4g35610 --------->bZIP60(2) <-----------GT1 --------->HSFB2a(2) ----------   tttcacggtcgagctcgagctccttgacaagatggccacgaaacaatttgccgaaattttctccactgaagctcgcgaaaacattgtatatccatctgag  9505600                                        <------ZmHOX2a(1)          ---------->DOF2                            ------>NtERF2                   <---------HSFB2a(1)                           --------->RAP2.6(2)              <---------HSFC1(2)       <---------ARR11(3)  --------->ANAC46                 --------->HSFB2a(1)                ------       --------->ARR11(3)  --------->ANAC58                 --------->HSFC1(2)                 <-----      <---------CCA1(2)    --------->ANAC58             --------->ANAC58                      <------ ------------CBF --------->ANAC58    <------NtERF2    --------->CCA1(2)                   ----------- ->RAV1(2)       --------->ANAC58    <---------At4g35610--------->ANAC58       <----------DOF2<------   aacattgtatatctatctgaagcaagaagacgccatggcagaggatgagagagaagagacgaaatttctcaaaggaaaactctttgaagtatatcaataa  9505700                                                                                     <---------MYB46(3)                                                                                     ----------->GT1                                                                          <------------CBF                                                                        --------->AHL20(1)                                                                        --------->ARR14(2)        --------->MYB52(1)                                              --------->ARR14(3) --->YAB1                                                               <---------ARR14(3) ---ATHB1                              <---------HSFB2a(2)              <---------AHL20(1) ---ATHB51       <------ZmHOX2a(1)     --------->HSFB2a(2)              --------->ARR11(3) ->CBF--------->At5g28300              ------>ZmHOX2a(1)                <---------ARR14(2) ---ATHB12      ----------->GT1   <----------DOF2                       <---------ARR11(3)   tacaacacagtaacagagaggagaaacttggtcttcctttcctcgaagacttgtatagaagacttactatacaagatattgttttagtggttaaaatcaa  9505800                                                                                         --------->AHL20(2)                              --------->TOE2(3)                                          <---------AHL20(2)                             --------->ANAC55(1)                                     <---------RVE1(1)                             --------->ANAC55(2)                                     <---------CCA1(1)                             --------->ANAC58                                       --------->ARR11(3)                 <----------ID1                                                     <---------AHL20(1)        --------->ANAC58     --------->ANAC58 <----------DOF2                --------->ZAT14        --------->ANAC46     --------->ANAC46<---------------AGL15           <---------ZAT14     <---        --------->ANAC58     <---------ANAC55(2)              <---------AtLEC2      <---------ARR11(3)   atcccattacaagacaattgggacaaataatacgtaaacttggtcttcctttcttagaagacttgcatagaagacttactgtacaagatatttttttagt  9505900                                      --------->ANAC55(2)                                      <---------ANAC55(2)                                    <---------ICU4                                   --------->ICU4                                 <---------ICU4                   <---------ANAC58                                 --------->ATHB51             <----------DOF2                                 --------->YAB1   <---------HSFB2a(1)                                 <--------HAHB4   <---------HSFC1(2)      <---------HSFC1(2)                                <---------YAB1    --------->HSFC1(2)      --------->HSFC1(2)                                --------->ICU4    --------->HSFB2a(1)  ---------->DOF2                          --------->DAG2         <-----------ARR10<---------ANAC58      <---------TOE2(3) ------MYB46(3)         --------->CCA1(2)       <---------GLK1(2) <---------ANAC46     --------->YAB1   ggttgaaaaatcaaatccctaacaagataaggccataattatgtgatacagaaacttccccttcctttccttggaaagcttctactctataacgataagt  9506000  Previous    Next  AGI:  At4g16890.1    Description:  SNC1 (SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1). similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G16920.1); similar to RPP5 (RECOGNITION OF PERONOSPORA PARASITICA 5) [Arabidopsis thaliana] (TAIR:AT4G16950.1); similar to RPP5 (RECOGNITION OF PERONOSPORA PARASITICA 5) [Arabidopsis thaliana] (TAIR:AT4G16950.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO70119.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains Range:  from: 9500525    to: 9505474    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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