Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   <-                                                                                                   --                                                                                                 <---                                                                                                <----                                                                                             <------ZmHOX2a(2)                                                           <---------ANAC58            <------MYB46(1)                                                       <---------ANAC58                <------MYB83<-        ----------->GT1                  --------->At4g35610                          <---------MYB46(3)     ---------->DOF2                  <---------At4g35610  <---------ANAC46           --------->MYB59 <---------------AGL15                --------->At4g35610  <---------ANAC58           <---------AtMYB61 -----------------AGL3      --------->ARR11(3)         <---------ANAC58  <---------AHL20(2)  -------- ---------------->AGL3      <---------ARR11(3)         <---------ANAC46 --------->AHL20(2)  <--------   gagccataaaaggtttctagttctcagtaagttctccatcatctgcagaagaaaatggcttgtgtgaaaaacaaataaatcgtcttgtttggtcgatccc  9482000                                                                                ---------->DOF2                                                                               <------ZmHOX2a(1)                                                                             --------->LBD16                                                                            <---------LBD16                                                                           ------>ZmHOX2a(2)                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                                                                        <------ZmHOX2a(1) <-------TEIL                                                         <---------TOE1(3) ----->MYC2                           --------->TOE2(3)               <---------TOE2(3) ------MYC3                    <---------TOE1(3)                <---------DEAR3(1)        <---------- ----->MYC3                    <---------TOE2(3)                <---------RAP2.6(2)     --------->AHL20(2) ------TOE1(2)           <---------ANAC55(2)                   --------->ATERF1(1)--------->ANAC58 -----ALFIN1             --------->ANAC55(2)                   --------->RAP2.6(3)--------->ANAC58 ------MYC2        ----------------------->TaNAC69(2)      --------->REM1(2)<-----------RAV1(2) ->PCF2           ----------->GT1     --------->TOE1(3)   --------->ALFIN1<------ZmHOX2a(2)         < -ARR14(2)--------->MYB52(1)  <-----------RAV1(2)     --------->At4g35610--------->ARR11(3)----------   acgttcattacaaaacagagttgtaatacgtttcaggttaccttaacaatgtgataagctgtggagacggctaaggatccaggaaaggaatttaacaatg  9482100                         ------>ZmHOX2a(2)                        <------ZmHOX2a(2)                --------->bZIP60(1)                       <-----------ARR10               <-----------HVH21                       --------->ARR14(3)             --------->ALFIN1                       --------->AGP1              --------->DAG2          --------->TGA1a                       <---------ARR14(3)        ---------->DOF2           <---------O2                       <---------AGP1            ====================================bZIP_DOF                       <---------ARR14(2)       <XXXXXXXXXXXXXXXXXXXXXMIR447C                       --------->ARR14(2)      ----------->HVH21           --------->ANAC46                       --------->ARR11(3)  <---------ZAT14<---------SPL7   <---------TGA1a                       <---------ARR11(3)  --------->ZAT2<---------ANAC58  --------->O2                 --------->ANAC58          <---------ZAT2<---------ANAC58  --------->ANAC58               <---------WRKY38(1)         <---------At4g35610             ==========================   ----------->GT1    <---------CCA1(2)    --------->At4g35610             --------->ANAC58   <---------ANAC46  ----------->ARR10   <-----------RAV1(2)             <---------ALFIN1 -GT1          <---------WRKY12          <---------WRKY38(1)    <-----------HVH21                   - ---------AtMYB61--------->ANAC58        <---------WRKY12<---------bZIP60(1)                      --- -->CBF       --------->WRKY18(1)      <-----------HVH21<------NtERF2  --------->AtMYB61       ------   tgatggtgtgaattcagtcaaggcagatcttaactgatcagggtcagcagtgaaaggtgtcgtccccatcagaccacacgtctattttaggcccttgatg  9482200        --------->ANAC58        --------->ANAC58    ------>ZmHOX2a(2)   --------->CCA1(2)   <------ZmHOX2a(2)  <---------ARR14(2)  --------->AGP1  <---------AGP1                                                                                    <  --------->ARR14(2)                                                                              <--  --------->ARR11(3)                           <---------ANAC58                              <-------  <---------ARR11(3)                           <---------ANAC58                            --------->DOF5.7(2) ========bZIP_DOF                    --------->LBD16                                      <----------DOF2 ---------->ARR10      --------->WRKY18(1)    --------->At4g35610 >>>>>>>ZML2             --------->TOE1(3) ------->DOF2 ----------------->AG----------->RAV1(1)       <---------ARR11(3)            --------->TOE2(3) --->AtLEC2   ------------>CBF--------->MYB46(3)         ------>ZmHOX2a(1)            --------->REM1(1)   caaagatctgaagcaaaccaattcagtcaagaacagccccagagaattagcttcccatcctagatgttctagtgagtagtttaggcctacaactttaact  9482300                                                                      <---------At4g35610                                      --------->At4g35610             <---------ZAT2       ----------->TBP                <---------At4g35610             --------->At4g35610       --------->AHL20(2) <---------ANAC46 ----------->RAV1(1)      <---------GLK1(1)       <---------AHL20(2)<------NtERF2--------->ZAT2              <------ZmHOX2a(1)               --- -----------GT1       <---------At4g35610 ----------->HVH21     <---------TOE1(2)                 <-- --------DOF2         --------->At4g35610--------->At4g35610    <---------TOE2(2)                ---- ----GT1    ---------->DOF2 --------->ALFIN1                  <---------SPL7             <---------ANAC46   ctttacgatataaataaagaatgcagcggcatgggggaacagcagcgacatgttttctcatcgacgtaggatagctggatgatacttcatggtttggaag  9482400                                                       --------->HSFB2a(1)                                                       --------->HSFC1(2)                                                       <---------HSFB2a(1)                                                       <---------HSFC1(2)                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                     <---------GLK1(2)    <---------ARR11(3)                                                    <------ZmHOX2a(1)     --------->ARR11(3)                                               ----------->HVH21          <---------ARR11(1)                                             ----------->RAV1(2)         <---------CCA1(2)                                             <---------At4g35610     <-----------HVH21                       ----------->GT1       ===============================RAV ------>ZAT18   ------>ZmHOX2a(1)            --------->At4g35610<-----------RAV1(1) -------ZAT18 --------->At4g35610          <---------ALFIN1     <---------YAB1            --------->MYB59 ----->ALFIN1 ----------->RAV1(2)        <-----------HVH21   ------>ZmHOX2a(1)      <------NtERF2   tggaccagacaatgtctcctgcagaaagtttataagctcgttccttcacctgaaggattcttccttatgctggtcatatctttggccgaagttaggccaa  9482500                                                        ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)                                                      <---------ARR14(3)                                                      --------->ARR14(3)                                                      <-----------ARR10                                                      --------->GLK1(2)                                                      <---------AGP1                                                      --------->ARR11(3)                                                      <---------ARR14(2)                                                 <---------bZIP60(2)                                              ----------->TGA1   <---------AHL20(2)            <-----                                       <---------YAB1 --------->ARR14(2)                       ------                                    <---------ARR14(2)<---------ARR11(3)        <---------ALFIN1                                    --------->ICU4   <------ZmHOX2a(1)        ----------->RAV1(1)          <----------DOF2      --------->AtLEC2  <---------ANAC46--------->AHL20(2)<---------GLK1(2)   aaacgcttctgtcttttggctattgaatcagcaatgcaaatattgttgatgacgaggatcttgctatttaaaattagttccaacacattctcttgtgaat  9482600                                           <---------WOX13(1)                                         <---------ICU4<----------ID1                                         --------->ATHB12                                <------ZmHOX2a(2)      <-------TEIL                      <---------AHL20(2)       ----------->RAV1(2)    <---------ARR11(3)     <-----------GT1               <----------DOF2     ----------->GT1                  --------->ARR11(3) ----ARR14(2)                  --------->GLK1(1)   ---------->DOF2                      --------->AGP1 --->ARR14(2)         ---------->DOF2   --------->AHL20(2)      -------->P    <-------TEIL------>ZmHOX2a(2)   ttgcgatatacatttttgtttacccaaagtctgatttctttattaattgctaataaagagaaaaacaacctgtgctaacatacacattgagatctattgt  9482700                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                                <----                                                                                            ---------                                                                                          <------NtERF2                 <---------------------WRI1                  ---------->DOF2              <---------LBD16           --------->DAG2                      <---------ARR14(2)                       --------->ARR14(2)         ---------->DOF2    ---------->DOF2    --------->ARR14(2)                       <---------ARR14(2)   atgtttcaaaaaaaaggcagacaaaatgttcaaaggaaacacaagagtgtttctgcattcagataaagaagaaattacaaacattttcaggctccggagt  9482800 --------P ---------WOX13(1) --------ANAC58                                                    --------->At4g35610 ------GAMYB<---------GLK1(2)                                  --------->ARR14(2) --------ANAC58                                     ------>ZmHOX2a(2) ------>MYB55(2)                                   <---------GLK1(1) -------MYB46(3)                                   --------->GLK1(1) ----MYB83  <---------ARR14(2)       --------->At4g35610   --------->ZAT6                ---------->DOF2 ----MYB46(1)                        <---------At4g35610------>ZmHOX2a(1)       <---------ANAC58 ------AtMYB61          <---------ALFIN1          --------->ARR11(3)            <---------ANAC58    - ----P      --------->ARR14(2)<---------YAB1--------->AHL20(2) <---------ARR14(2)        <<<<<<<<<<<<WRKY18 >LBD16--------->MYB52(1)   <---------CCA1(2)     <---------ARR11(3)            <---------ANAC46    -   tggttgattaaacggattttggttctccacatatcattctgcagaaaaaaatgatctccttactctatctgcagaaaaaatggcttgtgtcaaaagtcaa  9482900  Previous    Next  AGI:  At4g16855.1    Description:  unknown protein Range:  from: 9482389    to: 9482526    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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