Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------>ZmHOX2a(2) ------ZmHOX2a(2) --------AGP1 --------ARR14(2) --------ARR14(3) ------->ARR14(3)     --------->YAB1                        --------->YAB1 ----------ARR10     <---------ATHB12                  --------->At4g35610 ------->ARR11(3)   --------->ANAC58                   --------->ZAT14 --------ARR11(3)   --------->ANAC58           <---------ZAT2 ------->ARR14(2)  --------->WOX13(1)          --------->ZAT2 >ANAC46        --------->YAB1                 --------->At4g35610 >ANAC58       <---------ATHB12         <---------YAB1 <---------ZAT14              <---------At4g35610 >ANAC58 <-----------GT1       --------->ANAC46<---------At4g35610                  --------->At4g35610   agatctcattttcaccaataacaatcaacgtctacaaaactcattatacagctgaacagcagtgatcaccaatatgaaacaaaatcagctaaaactcaaa  9401000                                                                                                  ---                                                                                           <---------At4g35610                                                                                           --------->At4g35610                                                                      <---------TGA1a  <---------HSFB2a(1)                    <---------AtLEC2                                  --------->TGA1a  <---------HSFC1(2)                ----------->RAV1(2)                                   --------->bZIP60(1)<--------P                <---------ZAT2                                        --------->O2     --------->HSFC1(2)                <---------At4g35610                                   <---------O2    <---------TOE1(2)                --------->At4g35610                                ----------->HVH21  <---------TOE2(2)            <-----------HVH21                       --------->YAB1 ----------->TGA1   <---------TOE2(3)       ---------->DOF2                         <---------DAG2===================MYC_MYB--------->HSFB2a(1)  ----------->GT1   <---------ANAC58          ----------------->AGL1  ============================MYC_MYB <---------TOE1(3)  <---------ANAC58         ------->TEIL    <--------P               <---------TOE1(3) <---------TOE2(3) --------->ZAT2    --------->MYB52(1)<------ZmHOX2a(1)       --------->MYB46(3) <--   tttagggtttaaagagtcacctgcttggccttgtaacccaaacgacgagccttatcaggacgagtaggcctgacgagacgaacaatcgaaggttgctgtc  9401100                    <---------HSFB2a(2)                    --------->HSFB2a(2)                ------->GAMYB            --------->MYB55(1)           <---------MYB111(1)           <---------MYB52(2)           <---------MYB59           <---------MYB46(2)                                                  --------->ANAC58           --------->AtMYB61                                                   --------->ANAC58           <---------MYB111(2)                                                 --------->ANAC46    --          --------->ANAC58                                                    <---------ZAT18      <-          --------->ANAC58             --------->TOE1(1)                  <---------------AtSPL8   --        <---------ALFIN1  --------->ARR14(2)                        <-------TEIL  ------->TEIL    <--       <---------ZAT2     <---------ARR14(2)                       --------->CCA1(2)          -------      --------->ANAC46    <---------GLK1(2)                       <---------ARR14(2)         <------- ------>ZAT14------>MYB83<------ZmHOX2a(1)            ------>ZmHOX2a(1)   <---------------AtSPL3  --- -------ZAT14------>MYB46(1)           --------->TOE2(1)          --------->ARR14(2)       --------->WOX13(1)   tgtactcccagcacctaaccctctggaggaatctcatcacatcggactgtttcttcctccatagctcagatacatacttgtacgcacctatatcaatcaa  9401200                                 --------->MYB52(1)                              --------->ANAC58                              <---------ANAC55(2)                              --------->ANAC58                              --------->ANAC46                                                      <     <---------At4g35610      --------->ANAC55(1)                                                   -    <---------TOE2(3)         --------->ANAC55(2)                                                  == ------->ATHB12              <-------TEIL                                                   --------- --------ICU4               --------->CCA1(2)                                               <-------- ------->YAB1              --------->ARR14(2)                      <---------------------WRI1      -- -------ATHB12             <---------ARR14(2)                     <---------At4g35610      <------ZmHOX2a(1) -->YAB1                   --------->ARR11(1)       --------->MYB46(3)          --------->ANAC46 ---- --ATHB12                  <---------GLK1(2)--------->ATHB12      --------->At4g35610      ========== ------>ICU4          --------->MYB52(1) --------->YAB1          --------->GLK1(2) --------->CCA1(2)<   atcattaagctaagtagtttgcaataacagatacgtaacagaaacatcatttgaacaaacaatggagaagctgaatcgatctaagaaacgagaggatttg  9401300                                                       <---------ALFIN1                                                      --------->LBD16                                                     --------->RAP2.6(2)                                                     --------->RAP2.3(2)                                                     --------->DEAR3(1)                                                    --------->RAP2.3(1)                                                  --------->ARR14(2)                                                  <---------ARR14(2)                                            <-------TEIL  ----------->RAV1(1)                                           --------->CCA1(2)            --------->ZAT14                                          --------->ARR14(2)            <---------ZAT14                                          --------->ARR11(1)           ----------->HVH21 ---------HSFB2a(2)                       <---------GLK1(2)         <------NtERF2 -------->HSFB2a(2)                      --------->HSFB2a(1)       --------->ZAT18 =============================HOX2a_HOX2a--------->HSFC1(2)--------->ZAT14 >ARR14(2)                               <---------HSFB2a(1)       <---------ZAT14              ----- -ARR14(2)                               <---------HSFC1(2)<---------ZAT14                  --------- ---->ZmHOX2a(2)             <-----------------AGL1 --------------->AtSPL3      <---------MYB46(3) ----->ARR11(3)             <-----------GT1--------->ARR14(1)     <---------ANAC46         <---------AHL20(2) =====HOX2a_HOX2a          <-----------GT1<---------ARR14(2)   <-----------RAV1(1)    ------>ZmHOX2a(1) ---------HSFC1(1)     <------ZmHOX2a(1)----------->ARR10--------->ANAC46       --------->MYB52(2)   atctagaagaagggatggagaagaaggatttacccattttcgaagattcgcagagccgcacaacactggcgcagtgaagggtttgttcctgatttaaagt  9401400                                                                  ---------->DOF2                                                                  --------->MYB52(1)                                                              --------->AHL20(2)      <---------TOE1(3)                                       <---------AHL20(2)      <---------TOE2(3)    <----------DOF2<------------CBF   --------->AHL20(2)           <----------    *TSS                ------->TEIL  --------->ANAC58    --------->AHL20(2)             --------->ATHB12 ---->ALFIN1     ------------>CBF     --------->ANAC58    <---------AHL20(2)         <--------------- ->DOF2         >>>>>>>>>>>>>>>>>LFY  --------->ANAC46   --------->AHL20(2)  ---------->DOF2     <---   ggaagattagggttttatctccaatggacctttatattatacgaaattgggctacttgaattaataaataaaggcccataaaagacttccactattgggc  9401500                                                                                            <--------                                                                                            ---------                                                                                           <---------YAB1                                                     --------->ANAC46              --------->AHL20(1)                                                   --------->ANAC58                <---------AHL20(1)                                                   --------->ANAC46                <---------ARR11(3)                            <----------DOF2        --------->ANAC58                --------->ARR11(3) --CBF               --------->AHL20(2)  --------->MYB46(3)                     --------->AHL20(2) --AGL2              <---------AHL20(2)  --------->DEAR3(2)            --------------->AtSPL8      <- -------DOF2       <----------DOF2     --------->MYB52(1)              <---------------AtSPL8      ==   tttgaaattcggattaaggccctttaatttctttttcagacgaacagacacacacacaaaacaaaacttgtattgagtacaaaaaaatatttcatcattt  9401600                                                      ----------->GT1                                                     --------->DAG2                                               --------------->AGL15                         --------->AHL20(2)    <---------------AGL15                     <---------ANAC46         <-----------------AGL1                     <---------ANAC55(2)     --------->ZAT18                                        <                  <---------YAB1             <---------ZAT14                               <---------ZAT14                <---------ICU4               <---------ZAT18                               --------->ZAT14               --------->ICU4    <---------ZAT14    --------->DAG2              ------>ZmHOX2a(2)  -- -ICU4         <---------YAB1 ----------->GT1--------->ZAT14                    ===================== >ATHB12      --------->TOE2(3)  --------->ZAT14   ---------->DOF2          <---------YAB1 <---------ZAT18 --------------AGL15 <---------YAB1      <-----------GT1         <---------AHL20(2)   ---------->DOF2 ==============================================================MADS_MADS  --------->YAB1   --------->ZAT18   gacaaaattagaaaaacattattatgtataaatagtaaactattttctgcacaaaaaggtaaactattttttcatatgatgatcgattaaaagttcacta  9401700      <----------DOF2      ------>ZmHOX2a(1)            <-----------HVH21                                    <------NtERF2   ---------->ID1              --------->ATHB12                   <---------O2         --------->LBD16  <-----------GT1              --------->YAB1                    <---------LBD16     <---------LBD16 <-----------GT1               <---------ICU4           ---------->DOF2             <---------ZAT2 ---------AHL20(2)             -------->ATHB1          --------->TOE1(2)            --------->ZAT2 ------->AHL20(2)    --------->AtLEC2 ---------->DOF2 --------->MYB46(3)           --------->ANAC46 ============HOX2a_HOX2a      <---------YAB1   ---------->DOF2  --------->CCA1(2) <-----------RAV1(2)   attttatccttttttttagagtgatgcaaaaaatcattgtcaaaggaatgaaaggaaccaaagaagacacggggagagcccatcccagccggagagactt  9401800                                                  --------->ALFIN1                                                  <---------AtMYB61                                                <---------MYB46(3)                                               --------->ALFIN1                                               <---------DEAR3(1)                               <----                        --------->GLK1(1)      <---------AtMYB61                                <----                  <-----------TGA1           <---------MYB46(3)                             ------->TEIL                  --------->TOE2(3)         --------->ALFIN1                         <------MYB46(1)                 --------->ANAC46           <---------AtMYB61                        <------MYB83       <---------WOX13(1)                --------->ATHB12            <------ZmHOX2a(1)     <---------AtLEC2    <---------YAB1<-----------HVH21     <---------YAB1             <---------TOE2(3)--------->MYB59   ataagtttgatagacaaaaacgtcagaaatcgtttgactacgatgagtggtggtggtgttctgaagtataaggatggaatgagagtttggtttgcatctc  9401900  Previous    Next  AGI:  At4g16720.1    Description:  60S ribosomal protein L15 (RPL15A). Identical to 60S ribosomal protein L15-1 (RPL15A) [Arabidopsis Thaliana] (GB:O23515); similar to 60S ribosomal protein L15 (RPL15B) [Arabidopsis thaliana] (TAIR:AT4G17390.1); similar to 60S ribosomal protein L15 [Brassica oleracea] (GB:ABD65137.1); contains InterPro domain Ribosomal protein L15e; (InterPro:IPR000439); contains InterPro domain Ribosomal protein L23/L15e, core (InterPro:IPR012678) Range:  from: 9399982    to: 9401404    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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