Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->ARR11(3)                             --------->DEAR3(1)                             <---------ANAC46                            <------NtERF2--------->GLK1(1)                           <---------ATERF1(1)                           <---------RAP2.3(1)                           <---------ORA47(2)                           <---------ERF1--------->At4g35610                           ------>NtERF2<---------ARR11(3)                           <---------DEAR4(2)                          <---------ANAC46                                              --------->ANAC58                          <---------DEAR3(1)                                            --------->ANAC58                          --------->ATERF1(2)          --------->YAB1              --------->ANAC58                          <---------RAP2.6(2)          <------ZmHOX2a(1)           --------->ANAC58                          <---------RAP2.3(3)        <---------TOE2(3)        <---------ZAT18                          <---------RAP2.3(2)    --------->YAB1             --------->LBD16                         <---------ABI4(1)     --------->ANAC58            <---------ANAC46    <-----              ---------->ID1--------->ATERF1(1)--------->ANAC58           <---------LBD16      <-----    <-----------GT1      --------->ATERF1(1)   --------->AtLEC2    <-----------RAV1(1)---------->DOF2   actacattaccttcttgtcttcatagaggcggcgagcatgaagagctccaagcataaggatagtagccattgttgctccgggcacaagaaaagcattgcc  9397900               <--------ATHB1               <------------ATHB5               --------->ATHB12              <---------ATHB12    <---------ANAC46    <---------ANAC58    <---------ANAC58    ----------->GT1                                       <---------WOX13(1) ----ANAC58   --------->ICU4                            --------->ATHB12         ------>ZmHOX2a(1) ----ANAC58   <---------YAB1   --------->TOE2(3)       <---------YAB1 ---------->DOF2   tacattgagtgaaacaatgattcaagctcaaaaccatagaatcgatctaattgcaatctgattggaacttcacaaagtgtttcctacagaacaaaatgct  9398000                                                                                                   --                                                                                                   <-                                                                                                <----                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                    <---------HSFB2a(2)                  <---------LBD16                                                    --------->HSFB2a(2)    <-----------GT1 --------->LBD16              <-----------ARR10                  <---------DAG2   <---------AHL20(2)  <---------HSFC1(2)              --------->GLK1(2)                  <----------DOF2--------->AHL20(2)    <---------HSFB2a(1)             <---------GLK1(2)           ---------->DOF2        <---------AHL20(2)    --------->HSFB2a(1)  --------->TOE2(3)                 --------------->AGL15     --------->AHL20(2)    <---------GLK1(2)   caaaacttaaacttagaatcttttcaactgtaatctaactatgtaaaggagcttttcgaagcatatatatatatgaattacctttggaatctccggttcc  9398100                                 <---------At4g35610                                --------->DEAR3(1)                                --------->ATERF1(2)                        --------->LBD16                        <---------At4g35610                     <---------ATERF1(1)                  ------>NtERF2--------->RAP2.3(1)                  <---------ATERF1(1)                  --------->LBD16------>NtERF2                <------NtERF2 <---------At4g35610                --------->ATERF1(1)               ------>NtERF2  --------->At4g35610              --------->ARR14(2)<---------ATERF1(2)              <---------ARR14(2)--------->RAP2.3(2)          <------NtERF2 --------->At4g35610          <---------LBD16     <---------ATERF1(1)          --------->ATERF1(1) ------>NtERF2         <---------ATERF1(1) <-----------RAV1(1)         ------>NtERF2<------NtERF2 ------>NtERF2        --------->ARR14(2) ----------->RAV1(2)       --------->ATERF1(1) <---------At4g35610      ------>NtERF2 <---------ARR14(2)      --------->LBD16------>NtERF2 --------->DEAR3(1)        --------->ICU4      <---------ATERF1(1)  --------->At4g35610           --------->LBD16                        -----    <---------LBD16--------->ATERF1(1)                 <---------LBD16                          -----   ------>ZmHOX2a(1)--------->ARR14(2)                --------->MYB52(1)                  <---------At4g35610 ------->AtMYB61<---------LBD16--------->ERF1     ------->MYC2                            --------->At4g35610 --------ALFIN1<---------ATERF1(1)<------NtERF2   <-------MYC3                       ---------->DOF2 -----ALFIN1 --------->ATERF1(1)--------->RAP2.6(2) <---------ABI4(2)               <------ZmHOX2a(1) ->ARR14(2) ------>NtERF2  --------->ZAT2         ------->PIF5           --------->ARR14(2)     <---- --TCP16(1) <---------ATERF1(1)--------->ATERF1(1)<-------PIF5           <---------ARR14(2)    <----- --ARR14(2) --------->LBD16<---------ZAT2         ------->MYC3           --------->ARR11(3) --------- --TCP20<---------ARR14(2)<-----------RAV1(1)     <-------MYC2<--------ATHB1      <---------TOE2(3)<-   acctcctccggctccggctccggctccgctgctgccgccgagaggcgaagcacgagcaccggaataattcgaacggatattgttgaggaaagagctgaag  9398200                              --------->CCA1(2)                             <---------ARR14(2)                             --------->ARR14(2)                             --------->ARR11(3)                             <---------ARR11(3)                           ----------->ARR10                        <---------ANAC46        >>>>>>>>>WRKY6 --------->ATERF1(1)                                                     <-----      --------->WRKY12 <---------LBD16                                                        ------>NtERF2      --------->WRKY38(1)--------->LBD16                                                     --------      --------->WRKY45 <------NtERF2                                                        <--------     --------->DOF5.7(2)<---------DEAR3(1)                                                 --------->LBD16 ---->HSFB2a(1)       <---------RAP2.3(1)                                                <---------LBD16 ---->HSFC1(2)       <---------RAP2.3(2) --------->ANAC58                            <----------DOF2 -----HSFC1(2)       <---------DEAR3(1)  --------->ANAC58                         <---------ANAC58 ----TOE1(3)     ---------->DOF2       <---------ANAC58         <------ZmHOX2a(1) <---------ANAC46 -->HVH21    --------->At4g35610<---------YAB1 --------->AHL20(2)            <---------AtLEC2-------- ------TEIL<---------ZAT14<------NtERF2<---------ANAC58       <---------TOE2(3)   <---------ANAC58 --   gttcgacgttgactatgctgaaagcggcggagatatgaatagcgagccaaaaaatagacattttgaggaaaacgaggtttcatggcgtttttccggtggc  9398300                                   <-------GAMYB                                  <---------MYB46(3)        <---------DAG2          <---------ANAC46  <---------bZIP60(1)         *TSS--------->MYB52(2)  <---------ALFIN1           <--------P                              ------->GAMYB  --------->bZIP60(1)       <-------GAMYB                           --------->ANAC46 -NtERF2<----------DOF2   <---------TOE2(3)            --------->MYB52(1)       --------->ANAC46 ->ALFIN1                 <---------TOE1(3)          <---------MYB52(2)<-----------RAV1(2)      ----- -MYB52(1)            <----------DOF2             <---------ZAT14   --------->MYB46(3)   --------->ARR14(2) --->HVH21     <---------LBD16<---------MYB46(3)  --------->ZAT18   ----------->HVH21    <---------ARR14(2) --------->HVH21     <----------DOF2 --------->WRKY38(1)------------>CBF ----------->GT1--------->DOF5.7(2)   agtgacaccgcttttgctctggggttttagggttgtttgttgactgtttgagtaaactaacaatttttcaacgacaggttaaacgacagcgtttactcct  9398400                                     <-----------------AGL1                                         -                                    <-----------GT1                           <----------DOF2     ---                            ------>NtERF2                                     ------>ZmHOX2a(1) <----                         <---------At4g35610                             <---------ALFIN1     <------                         --------->At4g35610                             --------->AtMYB61    -------                       <---------ZAT14                  <---------At4g35610------>MYB46(1)   --------       --------->WRKY38(1) ----------->HVH21      <----------DOF2       --------->MYB46(3) <---------At4g35610  <---------ANAC58     --------->ZAT18<-----------------AGL1         <---------ZAT18       --------->ZAT2  <---------ANAC58     --------->ZAT14----------------->AG  <----------DOF2------>MYB83    <---------ZAT2 ->ZmHOX2a(1)     <----------DOF2 <---------AHL20(2)  <-----------GT1--------->ZAT18       --------->At4g35610   cttgacttgttgactacgttctttctgcgctgacattttatcccaattgggcctttttagctcttttatagcccaccatccttttttttggacagcagcc  9398500                                                                      <---------At4g35610                                                               <---------ANAC58                                                               <---------ANAC46                                                   --------->YAB1<---------ZAT6                                                  <---------YAB1 --------->ALFIN1        <---------AHL20(2)                       --------->ARR11(3)   --------->At4g35610   ------>ZmHOX2a(2) -------->MYB46(3)                               <---------ARR11(3)   *TSS        <---------ANAC55(2) -------->RAV1(1)                               --------->YAB1 <---------ANAC58   --------->ANAC58 -----ZAT18             --------->LBD16    <------NtERF2     --------->ZAT14      --------->ANAC46 ---At4g35610          --------->ANAC46   <---------RAP2.6(3)<---------ZAT14      --------->ANAC58 -->At4g35610          --------->ANAC58   ------>NtERF2----------->RAV1(1)        --------->ANAC55(2) ->DEAR3(1)            --------->ANAC58  <---------ANAC46   --------->ALFIN1    <-----------GT1     -   caccagacatttttttttgtcgaacccgaaacagagtagtttgccgtcgatgatcatcaacagtggagtgtaagcagagaaattacgccatagatcggag  9398600                            <---------ARR14(2)                           <------ZmHOX2a(1)                                                  -------                     ---------->DOF2            ------>ZmHOX2a(2)                            <-------                  --------->At4g35610         <---------AGP1                           --------->ANAC58              --------->DEAR3(1)              --------->ARR14(2)                       --------->ANAC58           --------->DEAR3(1)                 <---------ARR14(2)                     ---------->DOF2< -------------------->WRI1 ============================HOX2a_HOX2a            <-------TEIL   <-------   cgattttggagcatcgccgaagctaaagaggaattggaggtttctgtagatcggaaaacacttgttgttctctctctcgattcatcccaaagcaagattc  9398700                                     ==============================HOX2a_HOX2a                                <---------CCA1(2)   ------>ZmHOX2a(2)       <----------DOF2  --------->At4g35610     <---------ANAC58  <---------GLK1(1)       <---------ANAC58                     <---------ARR14(2)  <---------At4g35610    --------->ABI4(2)                     ------->TEIL --------->ARR14(2)  <---------DEAR3(1)                        <---------ARR11(1) <---------AGP1 ============================HOX2a_HOX2a        --------->ARR14(2) --------->ARR11(3)  ------>ZmHOX2a(2)<-----------RAV1(2)      <-----------ARR10 <---------ARR14(2)  <---------MYB46(3)  <---------MYB52(1)   <---------CCA1(2)                     - -->GLK1(2)     <------ZmHOX2a(2)    ------>ZmHOX2a(1)        <---------ARR14(1)        <---------ANAC46 --GLK1(2)     <---------ARR11(3)--------->ARR14(2)   <---------ANAC55(2)               --------->YAB1 ---------CCA1(2)    =======================HOX2a_HOX2a     ------>ZmHOX2a(2)        <---------CCA1(2) --ARR11(3)    --------->ARR11(3)<---------ARR14(2)   --------->ANAC55(2)          --------->YAB1   -   ttggatctgcctcttaagatcgatcggtgcttttgtatcctcaggtatgtgttgatacttgatcgtatctatctacagagattaatcgtatcgtagtctg  9398800  Previous    Next  AGI:  At4g16700.1    Description:  PSD1 (PHOSPHATIDYLSERINE DECARBOXYLASE 1); phosphatidylserine decarboxylase. similar to unnamed protein product [Vitis vinifera] (GB:CAO39965.1); contains InterPro domain Phosphatidylserine decarboxylase; (InterPro:IPR005221); contains InterPro domain Phosphatidylserine decarboxylase-related; (InterPro:IPR003817) Range:  from: 9395658    to: 9398330    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g16710.1    Description:  glycosyltransferase family protein 28. similar to hypothetical protein [Vitis vinifera] (GB:CAN71397.1); contains InterPro domain Glycosyltransferase 28, C-terminal; (InterPro:IPR007235) Range:  from: 9398570    to: 9399823    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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