Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    ----------->GT1                    <----------DOF2             --------->LBD16                         ------>ZmHOX2a(1)             ------>ZmHOX2a(1)               ------>ZmHOX2a(1)           <---------LBD16          ----------->RAV1(2)        --------->GLK1(1)           <---------At4g35610   <---------MYB52(1)  --------->YAB1       <---------MYB59                    --------->YAB1 -DOF2  <---------GLK1(1)           --------->At4g35610           <---------AHL20(2)              ---   attcccttagatttcctgaaatgtataatcaagttttcatctgattcctaacatccttttgtttgtatttcattttgaaaatcagaaaatatgtggtttc  9376400                                                                                                    <                                                                                                -----                                          <----------DOF2                                   <--------                                         <---------ANAC58                                 --------->YAB1                                         <---------ANAC58                                <---------YAB1                                   --------->ATHB12                                     --------->AHL20(2)                                  <---------TOE1(3)                                     --------->AHL20(1)         --------->ANAC55(2)      <---------TOE2(3)                                   --------->AHL20(1) ---------->DOF2        ---------->ID1   <---------ANAC46                             <---------AHL20(1) ------>ANAC46  <----------DOF2   <---------YAB1                                ----------->GT1 <----   actcaaagtttaagtattctttttttgtccgattttaagattggcttatttgatgaaaattcagtagaattcaaaactcgatttgaaaaatattataaat  9376500                                                            --------->TOE1(2)                                                            <---------LBD16                                                           <---------At4g35610                                                           <---------ZAT2                                                           ----------->RAV1(2)                                                           --------->ZAT2                                                         <---------ALFIN1                   <--------                                                         --------->REM1(1)         --------->ZAT14     ----------->GT1                                   <-----------HVH21         --------->ANAC46 ---------AHL20(2)                                   <---------HSFC1(2)          --------->ANAC58  -- ---->AHL20(2)                                       --------->HSFC1(2)          --------->ANAC58  -- -YAB1                  <---------TOE2(3)       --------->HSFB2a(2)            <---------ALFIN1    -- -----AHL20(2)          <---------TOE1(3)       <---------HSFB2a(2)  <-----------GT1        ---------   atttaagttgtaaaaaatcagtgtttaaggcttaagactctctagtagtgcgagaagcttcacctgggatttaaccaaaacacactccagacttctaggc  9376600                                              <-----------HVH21                          <---------ANAC58   ----------->HVH21     --------->ARR11(3)                          <---------ANAC58  ------->MYC4           <---------AHL20(1)                         --------->HSFB2a(1)------->MYC2    <-------MYC3                         --------->HSFC1(2) -------->ABF1   <-------PIF5                         <---------HSFC1(2) <-------MYC4    ------->MYC3                     --------->ANAC58       <-------MYC3    ------->MYC4                     --------->ANAC58       ------->MYC3    ------->MYC2                  ------->GAMYB             <-------MYC2    <-------MYC2     --------->YAB1  --------->ANAC46      --------->O2     ------->PIF5 --------------------->WRI1   ------>MYB83  <---------ALFIN1          --------->ANAC55(2)     <---------ARR11(3)   ------>MYB46(1)===================================MYC_MYB<-------MYC4 <------------CBF -HSFB2a(2)     ------>MYB83               <---------ANAC55(2)     --------->AHL20(1) ------>P --------->MYB46(3)               <---------O2    <---------TGA1a ---->MYB83     ------>MYB46(1)            --------->TGA1a --------->O2 --------->ATHB12  ------->TEIL ---->MYB46(1) ----------->RAV1(1)         <---------TGA1a --------->TGA1a <---------AtMYB61 >HSFB2a(2)   --------->AtMYB61          <---------ALFIN1  <---------O2<---------YAB1    <---------CCA1(2)   ctaccaagcgtaatcaccaacacacgaagcgtctcacatttcaacacgtgtcagttttcacacgtggaatattttcattggtggtatctctgaatcttat  9376700                                 <---------ZAT18                                 --------->ZAT14                            <---------AHL20(2)                            --------->AHL20(2)                            ----------->TBP                        <---------AHL20(2)                        --------->AHL20(2)                                                -----------                        --------->YAB1                                                   <---------ANAC46                       <---------YAB1                                                  --------->MYB52(1)  <-----------HVH21  <---------ICU4                                                   ----------->TGA1  <-----------TGA1   --------->ATHB51                                                 ----------->HVH21 --------->O2        <--------ATHB1                                               --------->ARR14(2) --------->bZIP60(2) <--------HAHB4                                               <---------GLK1(2) <---------O2        --------->YAB1                           <----------DOF2     <---------ARR14(2) --------->ANAC46   <---------ATHB51                       *TSS    ------>ZmHOX2a(1)----------->RAV1(2) --------->TGA1a    --------->AHL20(2)                   <---------DAG2        <---------HSFB2a(2) --------->ANAC58   <---------ATHB12                  <-----------GT1          --------->HSFB2a(2) --------->ANAC58   --------->ICU4        ---------->ID1 <----------DOF2      <---------LBD16 <---------TGA1a------------>CBF --------->ZAT18<---------MYB52(1)--------->TOE2(3)--------->GLK1(2)   tccacgtcagtgtctcttctcaataattatataaatgcactcttgtctccatttgtttacttttctttcctcaagttttctccagaacctgacggaaaaa  9376800                                                         --------->DOF5.7(2)                                                         <---------MYB52(1)                                                        <-------GAMYB                                               <---------ARR14(2)                                            ------>ZmHOX2a(2)                         --------->LBD16   <------ZmHOX2a(2)                        --------->LBD16   --------->ARR14(2)            --------->ARR14(2)            <---------ARR14(2)    --------->ARR14(2) --------->LBD16   <---------GLK1(1)                     <---------At4g35610    ------->TEIL       <---------LBD16   --------->GLK1(1)       --------->At4g35610    <---------ARR14(2)<---------LBD16------>ZmHOX2a(2) <---------MYB46(3)      --------->At4g35610 >GT1       <---------ARR14(2)      <------ZmHOX2a(2) ---------->ID1--------->ZAT14             <----   aacttgaatctgcaaatcgacttcccccggagaatgcgatcggagatcggaaactggtcgttatctccgcttcactctctcagattacatcttagtttta  9376900                                   <---------DAG2        <---------HSFB2a(1)                                   <----------DOF2       <---------HSFC1(2)              ---------->DOF2                                  <---------ANAC58       --------->HSFC1(2)          <----------DOF2                        --------->At4g35610        <---------At4g35610           <---------ZAT18<----      <----------DOF2----------->RAV1(2) <----------DOF2 --------->HSFB2a(1)  <---------MYB46(3)<---- -------GT1        <-----------GT1<---------ANAC58 --------->At4g35610      <---------MYB52(1)  <----   tcaagtttctttgattcaaatttacctgctccaattgctttttctttctcttcatcggaaatttctacgaatgcttctgtttgttcgctttgaaagttgc  9377000                                                                                           <------NtERF2                                           <-----------GT1                               <---------RAP2.6(2)                                         --------->YAB1             ----------->GT1     --------->RAP2.6(3)  <---------ICU4                        --------->ICU4            ----------->GT1       --------->At4g35610  --------->YAB1                        <---------YAB1        --------->HSFB2a(2)   ------>ZmHOX2a(2) <---------ATHB12                     <---------ICU4          ------>ZmHOX2a(1)   <---------ARR14(2) -----ANAC58                     <---------MYB52(1)           =============================HOX2a_HOX2a -----ANAC58                   <---------ANAC58               <---------HSFB2a(2) --------->ARR14(2) -----ANAC46                   <---------ANAC58          <----------DOF2        <---------MYB46(3) --   ttaatcataacattttcgtcttcgattctatatgcgttagtaattatactctgtctaagctttcctagaggtgataaatcggtggatcgtagcggcagtg  9377100                                  <-----------RAV1(1)                           <---------ANAC46                                <----------DOF2                                 <---------ANAC58                             <-----------GT1                                    <---------ANAC58    -                             ------->TEIL                                   <-------GAMYB           <                          --------->ANAC58                              <-----------RAV1(1)        <-                          --------->ANAC58                     <---------YAB1<--------P  <-----------GT1                         <---------TOE2(2)                  <----------DOF2<---------MYB46(3)-------- ---->ZmHOX2a(2)         <---------TOE1(2)            --------->HSFB2a(2) --------->ALFIN1   <-------   atcgatttgaagtttgaaatctaatcgcatgtaactttgttggatttattctgtttctagggcttttgattctaatgtggttgcttctatataactgcag  9377200                                                                  --------->MYB52(2)                                                                <--------P                                                           <---------At4g35610                                                           <---------ZAT2       --------->At4g35610                           <---------CCA1(1)       <---------At4g35610                           <---------RVE1(1) -------->ARR14(2)                                  <---------ARR14(2) ---------ARR14(2)     <---------MYB46(3)           --------->ARR11(3) -----ZmHOX2a(1)      <---------ANAC46       <---------LBD16  <---------MYB46(3)       ------>ZmHOX2a(2) ->ZAT14          <---------LBD16 --------->ATHB12  <---------ARR11(3)         <---------YAB1 --ZAT14      <---------REM1(2)  <---------YAB1   ----------->ARR10    <---------ZAT6<---------ARR11(3)   aggaattgctgctctctactcgcggtgtttagtttacgattggaatatggggaagatatttagctggttagtggtgttattgtcattgatctcattagtc  9377300  Previous    Next  AGI:  At4g16650.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G76270.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66567.1); similar to OSIGBa0122F23.8 [Oryza sativa (indica cultivar-group)] (GB:CAH67151.1); similar to OSJNBa0010H02.2 [Oryza sativa (japonica cultivar-group)] (GB:CAE01682.2); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 9372499    to: 9376431    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g16660.1    Description:  heat shock protein 70, putative / HSP70, putative. similar to heat shock protein, putative [Arabidopsis thaliana] (TAIR:AT1G11660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44129.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69633.1); similar to hypothetical protein OsI_008490 [Oryza sativa (indica cultivar-group)] (GB:EAY87257.1); contains InterPro domain Heat shock protein 70 (InterPro:IPR013126); contains InterPro domain Heat shock protein Hsp70; (InterPro:IPR001023) Range:  from: 9376759    to: 9381529    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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