Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   ---------->DOF2                                                                               <---------AHL20(2)         --------->ANAC46                                               ----------->GT1         <----         --------->ANAC58                                            --------->GLK1(2)         <-----         --------->ANAC58                                           <---------ARR11(3)         ------ ---->ZmHOX2a(1)                                                    --------->ARR11(3)         ------ ->HSFB2a(1)                 <---------AHL20(2)      <---------------AtSPL8    --------->AHL20(2)  <- --HSFC1(2)                  <---------YAB1         ---------->DOF2 <---------GLK1(2)          <----- ->HSFC1(2) ----------->RAV1(1)       ---------->DOF2--------->DAG2<---------RVE1(1) ---------->DOF2<   cctacaaatacacaccacaaaaatccaaatttttattagaaaaagaatgtagaataaagttcgaaacagagattttgtaaattaaaagaaagaagaagat  9359700            --------->DAG2 -------GT1---------->DOF2                                              <------MYB83           ------ ----ARR14(2)                                                           <------MYB46(1)        ------ --->ARR11(3)                                             --------->MYB52(1)                 -------- --->ARR14(2)                                    <-------TEIL         --------->ALFIN1       <------- --------------AGL15                         --------->DAG2<---------TOE2(3)              <---------At4g35610 ----ARR11(3)                     <---------ARR14(2)    --------->ARR11(3) <---------WRKY38(1)<------ ----------DOF2         --------->ALFIN1   ---------->DOF2<---------DOF5.7(2)     --------->LBD16   acctttcaaggagaaaagcgagaggggtgatgagaagaactgatgcaaaggtgcataagataacgataagaagtgggtcaattccgagagacagcaactg  9359800                                               --------->TOE1(2)                                               --------->TOE2(2)                                             <---------ATHB12                                            <---------ARR14(2)                                            --------->ARR14(2)                                        ------>NtERF2                                       ------>NtERF2                             --------->At4g35610                    <---------ANAC46   --------->LBD16                  ------>NtERF2       --------->DEAR3(1)                  --------->LBD16 --------->GLK1(1)                 <---------RAP2.6(2) <---------LBD16                 <---------LBD16  <---------GLK1(1)     --------->At4g35610     ----------->RAV1(2)            ------>ZmHOX2a(1) ->GAMYB  --------->LBD16    <---------At4g35610       --------->KAN4(2) ----->HVH21    <---------LBD16   <---------ZAT2      <---------KAN4(1) ->At4g35610  --------->GLK1(2)   <---------At4g35610 --------->KAN4(1)                <---------ICU4 --At4g35610  <---------ARR14(2)  --------->At4g35610 <---------ICU4   <---------TOE2(3)     <------- ---MYB52(2)  --------->ARR14(2)  --------->ZAT2------>ZmHOX2a(1)     <-----------GT1 <---------YAB1   actcagtagctccgagtttccggcgtaaatcacctgagctccggccaatcctccgattattcctgcttctattaacgtctctctcttcatcattttttca  9359900                                                                    --------->MYB52(1)                                    <----------ID1                  ------>MYB83                                    ------->GAMYB                   ------>MYB46(1)                                 --------->MYB52(1)               ------->GAMYB                              <---------ICU4                <------MYB46(1)           <---------ANAC46                              --------->YAB1        <-----------------AGL1   --------->ARR14(2)                       ---------->DOF2              <-----------------AG     <---------ARR14(2)                    --------->AHL20(2)        --------->At4g35610 <---------MYB59     <-----------RAV1(1) ----GT1   --------->ANAC46--------->YAB1  <---------ATHB12 <------MYB83    <------ZmHOX2a(1)   acacaaaaaaaacacgaagaaaataaaaagaataataacggacaaatcagttggaacccatttggtaaccgaacagaaggattcgattttgtgggggaac  9360000                                                                                     <---------DAG2                                                                                     <----------DOF2                                                                                   <---------------AGL15                                                                                  <-----------------AGL1                                                                                  <-----------------AG                                                                                  <-----------------AGL3                                                                                  *TSS         <-----                                                                                ------>ZmHOX2a(2)                                                                              --------->ARR11(3)             --------->ZAT6       <-----------RAV1(1)                     <XXXXXXXXXXXXXXXXXXXXXMIR2936  --------->DAG2      <---------TOE2(3)            --------->YAB1   <----------DOF2--------------->AGL15 ---------->DOF2    <---------AHL20(2)  <---------MYB46(3)  ---------->DOF2   <---------ARR11(3)   taaaaaagcagagaaacactaattaagtttttggttttgttgttgttgataaatgaaaatagaaaagatgctttgtttgtgatctctctttttggtaatg  9360100                                                     <-------MYC3                                                     ------->MYC3                                 ---                                                    <---------O2                            ---------                                                    --------->O2                            ---------    <---------ANAC58                    <---------ANAC58                               --------->ALFIN1    <---------ANAC58                    <---------ANAC46                             <---------ANAC58  --------->ICU4            <----------DOF2  ---------->DOF2                   <---------YAB1    <---  <---------YAB1        <---------CCA1(2)<----------DOF2             <------------CBF<---------ANAC58 ----ANAC46       <----------DOF2       <---------ANAC58        <------------CBF     <---------ANAC46   tgtaatgcttgaagttgaaactttctctatctttcacttcttgcttttaaagacatgtgtccattacattgcattggttttattatggagtgtctcgcca  9360200                                <---------YAB1                              --------->AHL20(2)                              <---------AHL20(2)                             --------->AHL20(1)                             --------->AHL20(2)                             <---------AHL20(1)                             <---------AHL20(2)                        --------->AHL20(2)                 --------->YAB1                     <---------ARR14(2)                   <---------YAB1    <---------DAG2   <---------ARR11(3)                  <---------AHL20(2)    <----------DOF2  <---------GLK1(2)                   --------->AHL20(2)    <---------------AGL15<---------AHL20(2)            <---------YAB1 ------>YAB1         --------->ARR14(2)             <---------YAB1 >ANAC58             --------->ARR11(3)             --------->ICU4                                <-- >ANAC58 <---------LBD16<---------AHL20(2)      --------->At5g28300                     --------->ZAT18 ------YAB1        ----------->ARR10           ----------->GT1              ------>ZmHOX2a(1)    ----   ttatagctttttggggaagcgcagattttaatttatttttagtctaaaacggtgattatttttataacacatagagtcctcaaattttggtgcaatggat  9360300                                           --------->TOE2(3)<---------AHL20(2)                                          --------->At4g35610   <---------AHL20(2)              <----------ID1              <---------At4g35610   <---------ICU4 -------AHL20(2)                       <---------MYB52(1)   --------->AHL20(2)                <------ ----->AHL20(2)                      <---------MYB46(3)<---------TOE2(3)              --------->TOE2(3)   ttaatatgtatgaaataagacaaaacaaaaatttgagagcggttagcttaatttgttaagaaataaatatttcggtgagtctgatatttcttaaatagaa  9360400               <---------AHL20(2)              --------->AHL20(2)              <---------AHL20(1)              --------->AHL20(1)              <---------AHL20(2)          --------->AHL20(2)                                                                      <--         --------->AHL20(2)                                                      <---------HSFC1(2)      --------->AHL20(2)                                               <---------AHL20(2)         ---     <---------AHL20(2)                           --------->KAN4(1)   <---------YAB1              <--     --------->AHL20(2)                          <---------YAB1    <---------RVE1(1)           ------  --------->AHL20(2)                       --------->AHL20(2)     --------->ARR11(3)         <------- --------->AHL20(2)       <---------ARR14(2)  <---------TOE1(3)   <---------ARR11(3)         -------- <---------AHL20(2)       --------->ARR14(2)  <---------YAB1      <---------GLK1(2)         --------- ----ID1 <---------AHL20(2)--------->RAP2.6(3)<---------TOE2(3) --------->ICU4   --------->HSFC1(2)<-   caaataaataaataaataaaattcgccaaatcggctaggcaaaaatttaagattattcaaattgtcaagatttttatttgggaagttgccactatattaa  9360500                                        <---------ANAC55(2)                                        ----------->GT1 -------AHL20(1)                        --------->ANAC55(2) ------>AHL20(2)              ----------->GT1       ----------->GT1                   --------->ZAT6 -------AHL20(2)              <------MYB46(1)  --------->AHL20(2)       --------->GLK1(2) --->YAB1                     <------MYB83    --------->YAB1  <---------YAB1   <---------AHL20(2)   < --AHL20(2)                 <---------WOX13(1)--------->AHL20(2)       <---------GLK1(2)      ------- ->AHL20(2)               --------->ATHB12   <---------------AGL15     <---------ARR11(3) ---------->DOF2 >YAB1                   <---------YAB1<---------TOE2(3)    --------->AHL20(2) --------->AHL20(2)---- --------AHL20(2)--------->TOE2(3)    --------->MYB52(1)    --------->YAB1    --------->AHL20(2) ----   taaaatttggaatataaaaccatagttttgattggtaaaataacgtaataaaaatagcaaaattataaaacaagattctatttatttaagactaaagaat  9360600  Previous    Next  AGI:  At4g16620.1    Description:  integral membrane family protein / nodulin MtN21-related. similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT5G47470.1); similar to integral membrane protein, putative [Brassica oleracea] (GB:ABD64979.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 9358139    to: 9360082    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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