Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------ICU4               <---------WOX13(1)                                                --------->YAB1             --------->ATHB12                                               <---------ATHB12           <---------YAB1                                               --------->ICU4         <---------ANAC58                           <----------DOF2    ------>MYB83    --------->AHL20(2)                  --- ------>CCA1(2)            <---------DAG2     ------>MYB46(1) <---------AHL20(2)   <---------AHL20(2) ----YAB1        <---------At4g35610         --------->WOX13(1)       <---------ANAC46            <-- ->YAB1       <---------ANAC58 --------->AHL20(2)    ------->TEIL     <---------ANAC58        <------ >ICU4        <---------ANAC58 <---------AHL20(2) <---------YAB1  <---------AHL20(2)      --------->AHL20(2)   atatacagacaatttggctagctcattcactttttaaatgggcaaaccaatcatgaatgctagtttaatttatcgtgtgattgattttttttttatataa  9344800                                                       --------->At4g35610                                              --------->ANAC55(2)                                              --------->ANAC46                                              --------->ANAC58                                              --------->ANAC58                                             --------->SPL7                                             <---------TOE1(2)                           --------->YAB1  --------->TOE1(2)                    <---------DAG2         <---------SPL7                  ----------->GT1                    <----------DOF2        --------->TOE2(2)            --------->MYB52(1)      ----------->GT1     <---------YAB1 --------------->AtSPL3        ------->GAMYB --------->YAB1 ------>AHL20(2)   <-----------------AGL3--------------->AtSPL8       --------->MYB46(3) -------AHL20(2) <-----------GT1         <---------------AtSPL8       <---------MYB52(2) ---AHL20(2)  ----------->GT1            <---------------AtSPL3    <----------ID1 --------->YAB1 ----   aaaaatagaagtaaaattgtaactttttatgaaaaccgtcgtaatcgtacgtcactaagctacaaaaatacaacaaacagtgactaataagaaaatgtag  9344900                       ----------->GT1                     ------->MYC4                     ------->MYC3                     <-------MYC4                     ------->PIF5                     <-------MYC3                                                               -----                     <-------MYC2                                                            <-------TEIL                     ------->MYC2                                                           <--------                     <-------PIF5                                                           ---------                    --------->O2                                                         <---------TOE2(3)                    <---------O2                                                     --------->YAB1                    --------->TGA1a                                                 <---------YAB1  <                    <---------TGA1a                                             <---------ZAT2  -----                    ===========================================MYC_MYB          --------->ZAT2<------                    <---------ANAC55(2) <------ZmHOX2a(1)  <---------ANAC58     --------->At4g35610--                <-----------GT1--------->YAB1              <---------ANAC58    --------->ANAC46 -----              --------->AHL20(2)     <------ZmHOX2a(1) <-------GAMYB    <---------MYB46(3) --------->TOE1(3)       --------->At4g35610     <---------ICU4         <-----------RAV1(1)<-------GAMYB--------->DOF5.7(2) ------->GT1------->TEIL     --------->ARR11(3)    <-----------GT1   <-----------RAV1(1)<---------DOF5.7(2)   agtgatattagatgaatttaacacgtggaaaaatcatgaggaggagatgattttttctgttgcattcccttctgtggttaccagctacgataacgttcac  9345000          --------->AHL20(2)      <---------ALFIN1    ------>ZmHOX2a(1)                                             <---------ANAC58 ---->ANAC58                                                      <---------ANAC46 ---HVH21--------------->AGL15                      ============================HOX2a_HOX2a >DOF5.7(2)--------->AHL20(2)                       <------ZmHOX2a(2) ---------ALFIN1                        --------->ANAC58          <---------ANAC58 ---->ANAC46                            --------->ANAC58----------->RAV1(1)        ---------->DOF2 ---DOF5.7(2)                  --------->AHL20(1)  <---------ARR11(3)    <------ZmHOX2a(1)          - ------->DEAR3(1)              --------->AHL20(2)  --------->ARR11(3)<---------ZAT14              --- ---->ANAC58   --------->YAB1  <---------AHL20(2) <---------GLK1(1) --------->ALFIN1    <----------ID1   gccctcctccacttaaattagaatgtgagaaaataaaatagcaagaaattggagatcacaacagtattgagtgtaggacatattacaaaggagacaaaat  9345100                                                ------>NtERF2                                            --------->DAG2             ----------->GT1               --------->DAG2                                       -----            --------->DAG2              --------->AHL20(2)                          <---------ICU4          ---------->DOF2    --------->AHL20(2)<---------PCF5                       --------->YAB1     ----------->GT1    --------->AHL20(2)---------->DOF2               *TSS  --------->ANAC55(2)     --------->YAB1     --------->YAB1  --------->YAB1          ---------->DOF2    <---------YAB1 ----------->CBF   ------------>CBF    ----------->TBP   ----------->HVH21    <---------ANAC55(2)  <- ------>WOX13(1)  --------->YAB1   ------------>CBF<------------CBF<----------ID1  --------->ICU4  <-   cagtcaatagtaaaaaggtatcacaataaaaaaaaatgtcaataaaaaggggccattgtatgacatgaaagaacaaaattaagtgatcatcacttctcct  9345200                                                                      <---------ALFIN1                                                                      --------->AtMYB61                                                                    ------>NtERF2                                                                   --------->ANAC46         --------->At4g35610                                    --------->ANAC58                   <-        <---------ARR11(3)                                      --------->ANAC58                   <- ->ZmHOX2a(1)                                                   --------->ANAC46               <----- ---------DOF2                                              ------>ZmHOX2a(1)                -------- --------DAG2            ----------->RAV1(1)          ------>ZmHOX2a(1)                      <-------   cctttatcgagagcttcagttttagagcaacaatgtctctatttctgaagcccttcctcttcctatacgacaccactcttagtcttctcttacttctggt  9345300                                        <---------At5g28300                                      <---------YAB1                                    --------->YAB1                                    <---------ICU4                                   <---------AHL20(2)                                   --------->AHL20(2)                                   --------->ICU4 --------DAG2                      <---------ATHB51 ---------DOF2                 --------->AHL20(2)      <---------AHL20(2) ----MYB52(1)          <---------AHL20(2)           <---------TOE2(3) ->HSFB2a(2)           --------->AHL20(2)   ----------->HVH21<---------YAB1 --HSFB2a(2)------>ZmHOX2a(2)<---------ANAC55(2)    ----------->GT1      <---------AtLEC2   actttatagctcgatctctctatatataaatacttaaataattactgtgacattaagttaattgttatttctcatgcatgaattagttcaatggatggag  9345400                --------->At4g35610               --------->DEAR3(1)              --------->ATERF1(1)             <---------At4g35610             --------->ZAT2             <---------ZAT2             --------->At4g35610  <---------At4g35610             ------>ZmHOX2a(2)          --------->At4g35610     --------->At4g35610            <------ZmHOX2a(2)          <---------At4g35610 ----------->HVH21                 --------->ARR14(2)       <-------TEIL           --------->ALFIN1       <---------ARR14(2)      --------->CCA1(2)     <---------ANAC58         --------->ARR14(2)                --------->AtMYB61     <---------ARR14(2)     <---------ANAC58     <---------At4g35610               <---------ZAT18     --------->ARR14(2)     <---------ANAC46     --------->At4g35610          <---------ANAC58    <------ZmHOX2a(1)      <-----------------------TaNAC69(2)   <---------ARR14(2) --------->ZAT18  <  <---------TOE2(3)  ---------->DOF2         <-----------RAV1(1)------->TEIL  <---------ANAC58     --   tcttgaggatacagcagcagcccaaaagaggcgtgaagcagacaaaaatgctgcagaaactgaatggatccaactccaatacttgtggaccaaaacaagg  9345500                                            <------MYB46(1)                                     --------->ANAC55(2)                                     <---------ANAC55(1)                                     <---------ANAC46                                     <---------ANAC55(2)                                 <-------GAMYB                                <---------MYB46(3)                             <------MYB83  --------->MYB59                             <------MYB46(1)<------MYB83                             <---------ANAC46                            --------->MYB111(1)                                        <----------DOF2                            <---------AtMYB61                        <---------HSFB2a(2) --------------->AtSPL3     --------->MYB111(2)               <---------ZAT18        ------->TEIL --------------->AtSPL8     <---------MYB46(3)               <---------ZAT6     <---------AtLEC2 ---------ZAT14             --------->MYB55(2)          --------->YAB1        <-----------GT1 ------->ALFIN1             --------->MYB46(2)         <---------YAB1--------->HSFB2a(2)   agtgttgtactacttcccgttttcaagggtttggtggttatgtgtttggttctatccattatagtgttcttcgagagtttttacatgaactttgtgatac  9345600                                  <---------ZAT18                                         <---------ATHB12                                  <---------ZAT14                                       --------->MYB52(1)                                  --------->ZAT14                 <---------TOE1(3)  <<<<<<<<<<<<<<<<                              --------->DAG2                <---------ARR11(3)    --------->MYB46(3)                    ---------->DOF2                         --------->ARR11(3)    <---------MYB52(2)                  --------->TOE2(3)                --------->ANAC58    <------MYB83  --------->ANAC46                 --------->ANAC46 --------->ZAT18  --------->AtLEC2    <------MYB46(1)--------->MYB46(3)             <---------AHL20(2)  ----------->GT1   --------->ANAC58  <--------P   <---------MYB111(1)        <---------ARR11(3)   ---------->DOF2  --------->ANAC58    <---------TOE2(3)  >>>>>>>>>>>>>>>>      ----------->GT1  --------->ANAC46       --------->ANAC58    <---------AtMYB61 -------->P   tcttcgtcaagttatttaaacgtaaaccccataaagtgtacaaatgggaggccatgcaagaagatgttgaggttggacccgataactacccaatggttct  9345700  Previous    Next  AGI:  At4g16590.1    Description:  ATCSLA01 (Cellulose synthase-like A1); glucosyltransferase/ transferase, transferring glycosyl groups. similar to ATCSLA15 (Cellulose synthase-like A15), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G13410.1); similar to ATCSLA11 (Cellulose synthase-like A11), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G16190.1); similar to ATCSLA10 (Cellulose synthase-like A10), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G24070.1); similar to cellulose synthase-like A1 [Pinus taeda] (GB:ABG34547.1); contains InterPro domain Glycosyl transferase, family 2 (InterPro:IPR0 Range:  from: 9345172    to: 9349243    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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