Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                             --------                         ------>MYB83           <----------DOF2                    --------->ANAC58              --------->HSFB2a(2)         <---------ICU4               --------->ATHB12    --------->GLK1(1) <------ZmHOX2a(1)       ------>MYB46(1) <---------YAB1      --------->MYB52(1)    --------->ANAC58 --->ZAT6  <----------DOF2          --------->REM1(1)    <---------ICU4--------->YAB1      --------->At4g35610   gtaggaatatgttcttttggaatcaccaaatagtgcctacatcatcagtgctttgttcataaataccagtaaatgatagctaagtaagcaaggagatgca  9335600                                                                                                 <---                           --------->ANAC46                                                     <----                           --------->ANAC58                            <---------ZAT14          <----                           --------->ANAC58                            --------->ZAT18          -----               --------->ANAC58                          ---------->DOF2                        ----- --------->ATHB12        <---------DOF5.7(2)        --------------->AGL15                       <---- -TEIL<---------YAB1     --------->MYB52(1)   --------->ANAC46         --------->ZAT14       -------- ->AtLEC2      --------->ANAC58             <-----------GT1   ---------->DOF2           ----------->RAV1(2)   aattgattacaatggacaagcttaagtaaacggaatcaaactcaattcacaaaactcgatagagcaaagtgagtgaacagagacacaaacctctgggctg  9335700         <---------ANAC58                               --------->ANAC46         <---------ANAC46                               --------->ANAC58 <---------ANAC58                                       --------->ANAC55(1) <---------ANAC58                            --------->ARR11(3)                                  ---- --------RAV1(2)                             <---------ARR11(3)                                  ---- -----ZAT2                               ---------->DOF2<---------TGA1a                        <----- -----At4g35610                    ----------->GT1      --------->TGA1a                --------->ICU4 ---->ZAT2               <----------DOF2 =========================bZIP_DOF             <---------YAB1 ---->At4g35610--------->DAG2      --------->LBD16      --------->ANAC58             <---------At4g35610 --NtERF2<---------ANAC58=========================================bZIP_DOF           --------->YAB1 ->At4g35610 ---------->DOF2       ------>ZmHOX2a(1) --------->DEAR3(1)      <-----------GT1 ------->TEIL   caggcttgatgtcttgaaaggcgatgactttctcatcctgaaaaaaagataatcgcagacgtaagaaaacttgttcaatttagcctctgatgatgaacca  9335800                                                                                  --------->ANAC46                                                                                  --------->ANAC58                                                                              --------->CCA1(2)                                                                             <---------ARR14(2)                                                               --------->ANAC58   --------->ANAC58                                                               --------->ANAC58 <---------ALFIN1                                                     <------MYB46(1)         --------->ARR11(3)                                                     <------MYB83 <------ZmHOX2a(2)                                        <-----------------------TaNAC69(2)   --------->ARR14(2)                                     ====================================HOX2a_HOX2a                                     <------ZmHOX2a(1)  <---------GLK1(1)    <---------ARR11(3)                                     =====================================HOX2a_HOX2a             ---                                ----------->HVH21  <--------P <---------TOE1(2)<-------TEIL       ---                              --------->ALFIN1    ----------------------->TaNAC69(2)             ----                         <---------DOF5.7(2)     <---------MYB46(3) ----------->HVH21            ---- -->MYB46(1)             --------->MYB52(1)      --------->MYB55(2)------>ZmHOX2a(2)             ---- -->MYB83              --------->ARR11(3)        --------->ATHB12<---------ARR11(3)             <---- ----MYB59       >>>>>>>>>TBF1<---------ANAC46  <---------AtMYB61--------->ARR11(3) ----------->RAV1(2)   aacaaacaagagaagggaagaagaagataacggtgtgaaggagacgagtagtggttggatttcgcacgatctcacagaagatacacgcctgattcactcc  9335900           <---------ANAC58          <---------TOE2(2)          <---------TOE1(2)      <---------ICU4     --------->ICU4   <---------ICU4  --------->ICU4 ------>LBD16 --->NtERF2<---------ANAC58           --------->TOE2(3) ----->ANAC58                        --------->MYB46(3)     <---------GLK1(1)                    ---- ----->ANAC46                        ----------------->AGL2 --------->GLK1(1)    ---------->DOF2----- ----->ANAC58                   <---------At4g35610   <---------GLK1(1)<---------ANAC46         ----- -----LBD16<---------ANAC46     --------->At4g35610   --------->GLK1(1)<---------HSFB2a(2)*TSS<------   cgccataattcttacgtttggaatttgaaatcgctgctaaccaaaattcgaaatggatttcgatttccaagttgtggaaatgggaaagttgtcttctccg  9336000                                       <----------DOF2                xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                      ------>ZmHOX2a(2)         <---------AHL20(2)                                    <---------ARR11(3)      --------->ARR11(3)                                    --------->ARR14(2)      <---------AHL20(1)                                    <---------ARR14(2)      <---------ARR11(3)                <------ ---------->DOF2                    <---------AGP1 ------->GAMYB<---------YAB1              --------- -->NtERF2                   <---------AHL20(2)   --------->ANAC46<------------CBF--------->TOE1(3) ->NtERF2           --------->LBD16 --------->ARR11(3)      --------->AHL20(1)  xxxxxxxxxxxxxxxxxxxxx ---->LBD16        --------->ANAC46<---------CCA1(2) ----------->RAV1(1) ----------->GT1    <-------- ---LBD16<----------DOF2 --------->AHL20(2)     <-----------GT1<---------AHL20(2) --------->TOE2(3)   gccaaaagcctctttttttctccgaaactaaatatttggatctttcattttaaccccacaaatatttttattgctaagttaaacccttaactcatatacg  9336100                                                                <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                            --------->DEAR3(1)                                                            --------->AtMYB61              --------->ARR11(3)                                                            <---------ALFIN1               --------->GLK1(2)                                                           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                           --------->MYB46(3)    --------->MYB52(1)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                         --------->REM1(1)      ------->GAMYB                           <---------AHL20(2)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   <---------ANAC58                      --------->ANAC46       ----------->HVH21         <---------ZAT14  <---------AHL20(2)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -TEIL   --------->ZAT14  --------->AHL20(2)        --------->ANAC46            ----------->TGA1 >ARR14(2)         <---------ANAC46            <---------ARR14(2)   <-----------GT1        <---------ARR11(3) xx>smallRNA(si3)  <---------ANAC58            --------->ARR14(2) <---------KAN4(2)       --------->RVE1(1) -ARR14(2)     <----------DOF2            ----------->GT1<---------ALFIN1      <---------MYB52(2)   <   ttccgatttagtatagtctttacttgtattaattttcaaaaatatggaaaatttgcgctacaccaccgaataaccattctaactgacgaaaaaaatctat  9336200                                                                      <------MYB46(1)                                                                      <------MYB83                                                                     --------->MYB59                                                                  --------->ARR14(2)                                                                  <---------ARR14(2)                                                               --------->LBD16                                                              --------->HSFB2a(2)                      <---------AHL20(2)      <---------WOX13(1) <------ZmHOX2a(1)          ------>ZmHOX2a(1)                 --------->ATHB51  <-----------------AG          <----------DOF2      <---------AHL20(2)             <---------LBD16          <---------DAG2       --------->AHL20(2)             <---------HSFB2a(2)       ---------->ID1<---------AHL20(2)    <---------YAB1     <-----------------AGL1                < ---------AHL20(2)   --------->AHL20(2)  --------->YAB1    <----------DOF2                         --   atttgatttgtcctttttgtagattaattttgttttaatataagtataattgatagaagggcttccaggatttggtattttgtatttctcaaatttttgt  9336300                                        <---------ANAC46                         <---------ARR11(3)           <---------AHL20(2)           ----------->GT1                          <---------AHL20(1)          <---------YAB1              ------->TEIL   <---------AHL20(2)          --------->ARR11(3)       --------->AHL20(2)             <---------At5g28300                        --------->AHL20(1)       <---------AHL20(2)            <-----------GT1<---------AHL20(2)          <---------AHL20(2)       --------->AHL20(1)         --------------->AtSPL8                    <---------AHL20(2)       <---------AHL20(1)         <---------------AtSPL8          --------->AHL20(2)   <---------AHL20(2)          <---------YAB1--------->YAB1       <---------AHL20(1)  --------->AHL20(2)   --------->AHL20(2)          <---------AHL20(2)   <---------AHL20(1)      --------->AHL20(2) ---------ICU4                 --------->AHL20(2)   --------->AHL20(2) <---------AHL20(2) ------->ICU4  <---------AHL20(2) <---------------AtSPL3          <---------AHL20(2)  <---------AHL20(2)   aatatttattttattatttgattactcttaaatataaatgtaccgtataatcaattttttttttgtattttattttatataaatattttttaatatgtgt  9336400                                                                                    <---------TOE2(3)                                                                                    <---------TOE1(3)                                                                                --------->TOE2(3)                                                   <---------YAB1               --------->TOE1(3)                                    <---------RVE1(1)             <----------DOF2  <---------DOF5.7(2)                                   <---------ARR11(3)          <---------ARR11(3)  ---------->DOF2     <---------YAB1        <---------AHL20(1)     --------->AHL20(2)    <---------AHL20(2)<---------YAB1  <---------ARR11(3) ----------->GT1<---------CCA1(1)          --------->ARR11(3)--------->DOF5.7(2)  --------->ARR11(3) --------->YAB1--------->ARR11(3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <----   ataagttcttatttgtttttcaattgtaatatatgtagatattttcaacgaatattatacatcaagagctttagtttattttcgttaaagttttcattct  9336500  Previous    Next  AGI:  At4g16566.1    Description:  histidine triad family protein / HIT family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO16478.1); contains InterPro domain Histidine triad (HIT) protein (InterPro:IPR001310); contains InterPro domain Histidine triad-like motif; (InterPro:IPR011146); contains InterPro domain Histidine triad motif; (InterPro:IPR011151) Range:  from: 9334644    to: 9335990    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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