Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->ZAT14                         <---------At4g35610                  <---------ZAT18                         --------->At4g35610                  --------->ZAT18              <-----------GT1       --------------------->WRI1                  <---------ZAT14         <----------DOF2 <---------ZAT2    <---------ANAC58                    --------->At4g35610   <---------YAB1    <---------ANAC58              ---------->DOF2         --------->ZAT2              <----------DOF2   aaaatggcttactgagacaatgcactagcctctctcaaaagctgcttaatttcggttcgcagctctgattccctcgtgttcttcgaccctttctgaagaa  9275900                                                                                     --------->O2                                             ---------->DOF2                         <---------O2                                       --------->ANAC58                         --------->ANAC46                                       <----------ID1               --------------->AGL15                                       --------->ANAC58            <-----------------AGL1                             --------->CCA1(2)          <----------DOF2         --------->ANAC58                            <---------ARR14(2)       <-----------GT1<---------------AGL15                            --------->ARR14(2)       <---------ARR11(3)         --------->ANAC58                <---------YAB1 ----------->GT1--------->DAG2 <-----------GT1 --------->WRKY18(1) --------->TOE2(3)  <-------TEIL     ---------->DOF2 --------->ARR11(3)     <-----------HVH21   attccataattcaaaacgatgattcatgtggatatgaaaaaaagccaaaaagtattatcttttttaccttcttcaattggtcaagccacttggatagcaa  9276000                                                 <------ZmHOX2a(2)                                                 ===========================HOX2a_HOX2a                                                <---------ARR14(2)                                                --------->ARR11(3)                                  --------->At4g35610                                 --------->RAP2.3(3)                               --------->ZAT2   --------->ARR14(2)                               --------->At4g35610==========================HOX2a_HOX2a                               <---------At4g35610------>ZmHOX2a(2)                             <------ZmHOX2a(1)  <---------ARR11(3)                          --------->At4g35610------>NtERF2                        <---------WRKY12--------->DAG2               ------>NtERF2 ===========================HOX2a_HOX2a              --------->DEAR3(1)--------->ATERF1(1)   --------->HSFB2a(2)            ------>NtERF2 <---------At4g35610--------->LBD16<---------GLK1(2)        <---------At4g35610           --------->DEAR3(1)============================HOX2a_HOX2a             <----------DOF2         ------->GAMYB<-----------HVH21---------->DOF2<---------HSFB2a(2)   <-----------GT1     <----      --------->MYB52(1)<-----------RAV1(2) --------->RAP2.6(2)      ------>ZmHOX2a(1) <---------YAB1   ttggaagacaacgacgacgacgaaggtcagaggagcagccaaaaagccgcgatcttctataagcttctctccttccattaacccttttgctgattactga  9276100               ------>MYB83               <---------ARR14(2)               ------>MYB46(1)               --------->ARR14(2)          <-----------GT1   --------->ANAC55(2)                                              --------->TOE2(3)   --------->YAB1                                              ---------->DOF2   <---------ANAC55(2)                              <------ZmHOX2a(2)                     <---------HSFB2a(2)   --------->ANAC58            --------->YAB1      --------->AGP1   --------->TOE1(3)     --------->HSFB2a(2)   --------->ANAC58  --------->HSFB2a(2)          --------->At4g35610              --------->YAB1  <---------TOE2(3)  <---------HSFB2a(2)          <---------At4g35610    <---------WOX13(1)  <---------TOE1(3)--------->At4g35610           <XXXXXXXXXXXXXXXXXXXXMIR863-5P --------->WOX13(1) -----GLK1(2) --------->WOX13(1)      --------------->AtSPL8XXXXXXXXXXXXXXXXXXXX>MIR852  <---------LBD16   ttctaacgtaattcaccaatctgctcgaacaattcataactcagtaccattcagatcaacaaaataaaagccttaattgaatccatcatgttctggataa  9276200                                                                   ------>ZmHOX2a(2)                             --------->GLK1(2)                  --------->ATHB12           --------->ARR14(2)                            <---------GLK1(2)                  <---------YAB1              <---------ARR14(2)                        ---------->DOF2             ------>ZmHOX2a(2)                      >>>>>>>>>GATA-2                      =====================================HOX2a_HOX2a                     >>>>>>>>>GATA-3                      <------ZmHOX2a(1)           <---------ARR11(3)                       >>>>>>>>>GATA-4                      ====================================HOX2a_HOX2a                      >>>>>>>>>GATA-1                   <------ZmHOX2a(1)<---------ZAT18<------ZmHOX2a(2)                  <---------ANAC46          <---------ATHB12----------->ARR10       --------->ARR11(3)                <-----------HVH21   acatatcatctaatcaatggaggaggaaaagattctagtgcatatagaatgagatcgtcgtgagtatgatcggaacttacaatctccgtcgtggattcac  9276300                                                                      ------->TEIL                                                                      --------->GLK1(2)                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)                                                                     <---------GLK1(2)<---------HSFC1(2)                                           --------->MYB52(1)    ----------------->AGL1    <---------YAB1                                         <---------MYB52(2)      <---------ANAC58     <---------HSFB2a(1)                         <---------DOF5.7(2)     *TSS            <---------ANAC46     --------->HSFB2a(1)                       --------->DOF5.7(2)--------->TOE1(2)      <---------ANAC58  <------ZmHOX2a(1)             ---------->DOF2             --------->MYB46(3) <------------CBF ---------->DOF2     <---   agaaatttgaagccttcaagccgaggttaacgtctgaaattgaacgaacgatgggaatttagaattggcctgaatctgtaaaagaggagggttctgattt  9276400                                --------->AHL20(2)                               <---------AHL20(2)                               --------->AHL20(2)                        <---------ANAC46                        <---------ANAC58            <---------ANAC46                        <---------ANAC55(2)      <---------MYB52(1)          <---------DAG2       ---------->DOF2  <---------ANAC58    --------->ANAC58                 <----------DOF2 ------YAB1             ----------->GT1     --------->ANAC58    --------->YAB1        ------->GAMYB   tgataaaacaaaagtttctactcgtttcgtgaaataaataaaactcaagcccttatgtgtaaacaacaataactaaaccctttttcaacaggctctattg  9276500                               --------->AHL20(2)                           <---------AHL20(1)                           --------->AHL20(2)                           <---------AHL20(2)                --------->MYB52(1)                       <----------DOF2               --------->ARR11(1)                     <---------AHL20(2)      <---------ANAC46           ---------->DOF2 --------->AHL20(1)     <---------AHL20(2)    <---------YAB1             --  <---------ANAC46        --------->AHL20(2)<---------MYB52(1)          <---------TOE2(3)  <-------TEIL   ggcttcgttgaaataaagaaacggcccattaaattaaaactaaaccgcttgtttattttctttaaaatttcattaagcttgggtatacatgagtacatgt  9276600                                               --------------->AGL15                                              ----------------->AGL2                                              ----------------->AGL3                                              <-----------------AGL2                                              ----------------->AGL1                                              ----------------->AG                                              <-----------------AGL3                                       ---------->DOF2                         <---------AHL20(2)                                    --------->At5g28300                      --------->CCA1(2)                                  --------->ZAT6                            <---------ARR11(3)                                ----------->RAV1(1)              ----------->GT1         --------->MYB46(3)    <---------WRKY12<---------------AGL15 --------->AHL20(2)        ------ ----------->GT1               <---------WRKY38(1)               <------ZmHOX2a(1)          <-------- -------->DOF2                --------->WRKY18(1)               ----------->GT1--------->AHL20(2)   gaaaagaaacaacaactaggctacaagtttcagtcaacagtaaaagtatccaaatttagaatgaataggataaaaatagatataaatagtagagatgtag  9276700                                                                                              -------                                                                                           --------->HSFB2a(2)                                                                                           ----------                                                                                           <---------                                                                          <---------MYB46(3)  <------                                                                         <---------AtMYB61 <---------HSFB2a(2)                                                                         --------->ALFIN1 <----------                                                                       <---------ANAC58   <----------                                                                       <---------ANAC46   -----------                                                                       <---------ANAC58   <----------                                                                    --------->ALFIN1      -----------                   --------->ANAC58         --------->MYB46(3)    <---------ANAC55(1)     ===========  <----------ID1   --------->ANAC58       <-----------GT1         <---------ANAC46        ----------- ----->GT1     ----------->GT1          --------->AHL20(2)        <---------ANAC58        <---------- -REM1(1)    <---------ANAC46  ----------->GT1  --------->YAB1    <---------ANAC58      <-----------GT1   taaaactacaaaatggagggtaagaaattagaaatgtgaaaatttaacaaacataatgtattctttttacgtggagtggttgtaatggttttaccagaaa  9276800  Previous    Next  AGI:  At4g16444.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO14486.1); contains domain PTHR11615 (PTHR11615); contains domain PTHR11615:SF3 (PTHR11615:SF3) Range:  from: 9274465    to: 9276349    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version