Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                          --------->ATHB12   --------->RVE1(1)                                                                     <---------YAB1 ------->AHL20(2)   --------->At4g35610                                                --------->YAB1 ------>YAB1        <---------At4g35610          --------->ANAC46 --------->ANAC46--------->AHL20(2)   taaaaatatcgaattgttgttttgctgaacgaataagtttgtctatattagacgcgattagttcttctaaaccacattatccaaaaaaatcgtgattgac  9266900                   --------->YAB1                  <---------ATHB12                  <---------YAB1                 ------>MYB46(1)              --------->ANAC55(2)                                          --------->ATHB51              <---------ANAC55(2)                                          <---------ICU4          -------->HAHB4                                                  <---------YAB1         <---------YAB1                                              <---------LBD16         --------->ICU4                 <---------ANAC58      --------->YAB1  --------->YAB1     <---  ----------->GT1------>MYB83           <---------ANAC58<-----------GT1--------->LBD16           <--- -WOX13(1)--------->YAB1          --------->GLK1(2)   <---------ATHB12<---------ANAC46 ----------->GT1   tacatggtgtaatgatacctatcataccatctcaagaatatggcatgactcatccaattaacaattgtatttgcgcataattgtaagatgtgtaaattcc  9267000                                                                                    --------->AHL20(2)                                                                                    <---------ICU4                                                                                   <---------ATHB51                                                                                   --------->ICU4           <---------At5g28300                                                     <---------AHL20(2)          --------->MYB52(1)                                                       --------->AHL20(2)   <---------At4g35610                                         <---------YAB1 --------->ANAC58   --------->LBD16         ----------->GT1         <---------GLK1(2)  <---------------AtSPL8 ------DAG2<---------TOE2(3)         <---------At4g35610     --------->YAB1   --------->ANAC46 -------DOF2  --------->At5g28300    --------->At4g35610    <---------ATHB12  --------->ANAC58   ttttccgcttattaacggtgatttgcgataagttaattcagaagacgagtttcgattctcccatcataataggttgtactacgaaataatttcccaacat  9267100                                                                               <------MYB46(1)                                                                               <------MYB83                                                                     <---------ANAC58                                                                     <---------ANAC46                                                                     <---------ANAC58     ---------->DOF2                                                    <---------ARR11(3)        <---------AtMYB61                                     <---------ANAC58       --------->ANAC46  --------->MYB111(1)          <---------ETT(2)           <---------ANAC46     --------->ANAC46    --------->MYB59     <---------GLK1(2)               <---------ANAC58   <-----------GT1       --------->MYB46(2) ----  --------->ANAC46         --------->CCA1(2)        --------->ARR11(3)      <---------ANAC46---------   gtacacataatctcgacaaaaatccagtgatatgggtttacttgtagttgaatagatattacaccacaatgacttgtggtttggtatgtaagaaaaggca  9267200                                                     <---------YAB1                                                   <-----------GT1                                               --------->AHL20(2)                                               <---------AHL20(2)                                               --------->AHL20(1)                                               <---------AHL20(1)                                        <---------TOE1(2)         <---------GLK1(2)*TSS ------>DOF2                           ------>ZmHOX2a(1)          --------->ARR14(2)          <------ >DAG2     ----------->GT1     --------->ICU4 --------->AHL20(2)  <---------ARR14(2)        ------>ZmHOX2a(1)   aaagtatagtttgcagttaaaaaactgaaggaaatgatgtccttggtattaaattacgattaaacccatattctctctctcgcatagtctcttcctcttt  9267300                                     ------>ZmHOX2a(2)                                    --------->CCA1(2)                                    <------ZmHOX2a(2)                                   <---------ARR14(2)                                   --------->ARR14(2)                                   --------->ARR11(3)                                   --------->AGP1                                   <---------ARR11(3)  <---------TOE1(3)                                   <---------AGP1     <-----------RAV1(2)         <----------DOF2                               --------->ZAT14     --------->ZAT2           <---------ICU4                        --------->ANAC46           <---------ZAT2          <---------YAB1       -----                        --------->ANAC58          ------>MYB46(1)        --------->YAB1        <-----  <----------DOF2       --------->ANAC58    --------->ZAT18           <----------DOF2   --------->ANAC46 ----DOF2--------->TOE2(3)     <---------ZAT14    ------>MYB83 ---------->ID1--------->KAN4(2) ------   tcttctttcttcgtcaatttcagaacaagtcactacagatctgaagtgaaccaagctcaggttttgtcttctctttgatcattcctttctcagcaatata  9267400                                          ==========================================MYC_MYB                                         <---------MYB111(2)                  <---------GLK1(2)                                         <---------MYB52(2)                <-------MYC3                                         <---------MYB55(2)                ------->MYC3                              <---------DAG2                              <---------ANAC55(2)                       --------->ARR11(3)--------->MYB46(3)               --------->ANAC55(2)                      <------ZmHOX2a(1) ------>MYB46(1)                   --------->ANAC46             <---------------AGL15      ------>MYB83                      <---------ANAC46             ------>ZmHOX2a(1)<----------DOF2                             --------->TGA1a            --------->TOE2(3)<---------ANAC58 --------->TOE2(3)           <---------TGA1a         ---        <---------CCA1(2)  <-----------GT1------->GAMYB              --------->YAB1               ---   <---------ZAT6   <---------TOE2(3)  ----------->RAV1(1)         --------->ANAC58               --- ---->AHL20(2)    ---------->DOF2    --------->MYB46(3)<---------ANAC58   --------->O2            --- ----AHL20(2)<----------DOF2 <---------ANAC58 --------->TOE1(3)    --------->ANAC58            ------ --->AHL20(2)--------------->AGL15 <-----------GT1     <---------ANAC58   <---------O2   ------>ZmHOX2a(1)   aattagagttatatcctttataaaggattttgctttttcaccaacaaaccctaaattcggtgtctcagcaagaatcacgtgattctcgttcctcttcctc  9267500                                                                <---------AHL20(2)                                                           --------->AHL20(2)                                                           <---------AHL20(2)                                                           --------->AHL20(1)                                                           <---------AHL20(1)                                                          --------->AHL20(2)        --------->YAB1                                    <---------AHL20(2)       <---------ATHB12              ------>ZmHOX2a(2)<---------AHL20(2) ------>ANAC46                      <------ZmHOX2a(2) --------->AHL20(2) ------>ANAC55(2)            <---------At4g35610    <----------DOF2                                -- ------>ANAC58               --------->At4g35610 --------->ARR11(3)                      --------->KAN4(2) ------>ANAC58        --------------------->WRI1 <---------ARR11(3)                     <----------TaMYB80 >ZmHOX2a(1)   <---------CCA1(2)--------->At4g35610--------->TOE2(3)       --------->TOE2(3)    <----   acgaaacccatcatcttctatctcatttgtaagcagcgatctcaatccaaatacctttaattttatttgattccataccctaatttttgtatattccatg  9267600                                                                  <<<<<<<<<GATA-3                                                                  <<<<<<<<<GATA-2                                                                  <<<<<<<<<GATA-4                                                                  <<<<<<<<<GATA-1                                                                 --------->ARR14(2)                                                            <-------GAMYB            --------->LBD16                                <---------MYB46(3)          <-----------RAV1(2)                     <------ZmHOX2a(2)                                 -          <---------LBD16                        <---------ARR11(3)                          <-------    ------->TEIL     <----------ID1              --------->ARR14(2)                  <---------ANAC58 <---------ATHB12    ----------->GT1             --------->ARR11(3)                  <---------ANAC58 ------->WOX13(1)--------->CCA1(2)               <---------ARR14(2)    --------->AtMYB61     <------- -------HVH21<------ZmHOX2a(1)          --------->GLK1(2) <---------AtMYB61     ----------->HVH21   <   tcaatgaacgtttcaggagaaatgggtcaaaagttttgggagaatcaagaagatcgagcgatggttgaatccaccataggctctgaagcttgcgactttt  9267700                                                                                     --------->O2                                                                                     <---------O2                                                                                  --------->TGA2(2)                                                                                  ----------->HVH21                                                                                 <-----------HVH21                                                                                 <-----------TGA1                                                                                --------->ANAC58                                                                                <---------ANAC58                                                                                --------->ANAC58                                                                                <---------ANAC55(2)                                                                                =====================                                                                                --------->O2                                                                                <---------ANAC58  <--                                                                                --------->ANAC46 ----                                                                                <---------TGA2(1)<---                                                                                --------->TGA1a  ----                                                                                <---------O2     ----              <---------At4g35610                                               --------->TGA2(1)<---              --------->At4g35610         ---------->ARF1                       --------->bZIP60(2)              <---------ZAT2          <---------ANAC58                          --------->bZIP60(1) -------->At4g35610   --------->ZAT6 <---------ZAT2                             --------->ANAC55(2) < --DAG2       --------->ZAT2<---------ANAC58                                    <---------bZIP60(1)-- ---DOF2--------->At4g35610 <---------ANAC58   --------->MYB46(3)           <-----------HVH21    <--- ---------At4g35610   <---------ALFIN1<---------ANAC58               ----------->RAV1(1)        <----   tcatctcaacagcttcagcttccaacactgccttgtccaagcttgtctcaccaccaagtgattccaatctccaacaagggttacgtcacgttgttgaagg  9267800  Previous    Next  AGI:  At4g16430.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT2G46510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22671.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 9267283    to: 9269201    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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