Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->ARR14(2)                                   <---------ARR14(2)                               ----------------->AGL1                      <---------YAB1                        <---------ANAC58                  --------->ARR11(3)                        <---------ANAC58         --------->MYB59  <---------ICU4           <-----------GT1      --------->GLK1(2)--------->YAB1           <----------DOF2 ---------->DOF2  <---------ARR11(3)            --------->TOE2(3) -------HSFB2a(2) --------->AHL20(1)         <---------ARR11(3) ------>HSFB2a(2) <---------AHL20(1)         --------->ARR11(3)                            <---------   ctggaaagaatcaggtcgaatattttcatagtgaccgtatttgttaacatctttaacccattcagtgccataacattgaaccaattgattcaaatgtggc  9240900                   --------->At4g35610         --------->GLK1(2)                                    <---------ARR14(2)         --------->AHL20(2)        <---------ARR14(2)                         ---------->DOF2                   ----------->GT1        <---------GLK1(2)                      <---------TOE2(3)                  ===================        --------->ARR14(2)  ---------->DOF2   --------->MYB52(1)                  <------ZmHOX2a(1)     --------->HSFB2a(2)   XXXXXXXXXXXXXXXXXXX>MIR156G        --------->ARR14(2)<---------ANAC46     <---------HSFB2a(2)   XXXXXXXXXXXXXXXXXXX>MIR156A-F ----------->GT1  <---------TOE2(3)  <------- --RAV1(1)         <---------At4g35610        <---------DOF5.7(2)       ---------->DOF2  <---------AHL20(2)   cattgttccagattctcatcaagctgaaacaaaagagaagaaacacattaacgaaaagagagagaaaacgcgaataaaggttgaggagagtttaattacc  9241000                                          --------->ANAC46                                          --------->ANAC58                                          --------->ANAC58                                          --------->ANAC55(2)                                      <---------ANAC58                                      <---------ANAC58                                           <---                                     <---------At4g35610                            ------>ZmHOX2a(2)                                     --------->At4g35610                           <------ZmHOX2a(2)    ------>ZmHOX2a(2)              <--------P                                     --------->AGP1 <---  <---------ARR14(2)          <---------bZIP60(2)                                 <---------AGP1 ---- <------ZmHOX2a(1)         ----------->HVH21                                      <---------ARR11(3) ==========HOX2a_HOX2a     ----------->TGA1                <---------GLK1(2)      --------->ARR11(3) ----GT1                 --------->At4g35610             <---------YAB1     <---------TOE2(3)    ----   aaaggatcgagcttagggagagcaagaggctgacgaggtagcttacgaaatcgaagaccaagattgttgttctccattgagatagatctaatacaatgtg  9241100                                                                                                 ----                                                                                  ===================                                                                                  ===================                                                                                  ===================                                                                                  ------>ZmHOX2a(2)                                                                                 --------->CCA1(2)                                                                                 ====================                                                                                 ====================                                                                                --------->ARR14(2)                                                                                --------->AGP1<------                                                                                <---------ARR14(2)         ------>NtERF2                                   ===============================HOX2a_HOX2a        --------->ANAC46                  --------------->AGL15                 <---------ARR11(3)        --------->ANAC58                  <---------------AGL15                 --------->ARR11(3)        --------->ANAC58        ----------->GT1          ================================HOX2a_HOX2a ------------AtSPL8           <---------GLK1(1)          <------ZmHOX2a(1)      <---------AGP1------- ------------AtSPL3          <---------ARR14(2)      ---------->DOF2          ----------->ARR10  ---- ----------->AtSPL3          --------->ARR14(2)   <----------ID1       ----------->GT1 --------->ALFIN1 ----------->AtSPL8      <---------LBD16 --------->TOE1(2)    <-----------RAV1(1)<------ZmHOX2a(2)   aggtactactacgccattagagagaattggggatttgtgaaaacctagaaatgggaaaaggacattgttggagtagtaagtagatctgagtgggggagct  9241200                                                 --------->LBD16                                                 <-----------HVH21                                                <---------ANAC55(1)                                                <---------ANAC46                                                --------->ANAC55(2)                                                <---------ANAC55(2)                                                <---------ANAC58                                                <---------ANAC58                                               <-------TEIL                                               ================HOX2a_HOX2a                                               ==============================HOX2a_HOX2a                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                              =================HOX2a_HOX2a                                              ===============================HOX2a_HOX2a         <------ZmHOX2a(1)                   --------->ARR11(3)       --------->ALFIN1                      --------->ARR14(2)    <------ZmHOX2a(1)                        <---------ARR14(2) ----->MYB52(1)                              --------->AGP1 ===============HOX2a_HOX2a                  <---------ARR11(3) ==========HOX2a_HOX2a                      <---------GLK1(1) ==================HOX2a_HOX2a              --------->GLK1(1)                  --------->ICU4 ===============HOX2a_HOX2a            ===============HOX2a_HOX2a       ---------->DOF2             - ==========HOX2a_HOX2a    <----------DOF2  ----------->ARR10  --------->ZAT2   <---------YAB1   ----- ---At4g35610           ---------->ID1 <------ZmHOX2a(1)<------ZmHOX2a(1)--------->DAG2         ----- -->At4g35610    ------->TEIL          ==============HOX2a_HOX2a      <------ZmHOX2a(1)       ------- ------>DOF2<------ZmHOX2a(1) --------->ANAC46--------->CCA1(2)   <---------ANAC46           <------ZmHOX2a(1)   aaaggaggagaggaggatgaatctttgtctttacgcagagaggaagagatccgtgagaggaagcagttgggaggaaaagtgaagattactcaagaggaaa  9241300                                                                                  <------------CBF                                                                                 --------->ATHB12                                                                                 --------->YAB1                                                                                 -------->ATHB1                                                                                 <--------ATHB1                                                                                 <------------ATHB5        --------->ZAT2                                                           <---------ICU4        <---------ZAT2   ----------->RAV1(1)                 <---------AHL20(2)  --------->ATHB51        --------->At4g35610                                  --------->AHL20(2) <---------ATHB12        <---------At4g35610                              <----------DOF2        --------->ICU4------- --------->DOF2 <----------DOF2                        ---------->ID1         --------->WOX13(1) ---->ANAC58  <---------At4g35610                 <----------DOF2            ------------>ATHB5 ---->ANAC58  --------->At4g35610                 <---------DAG2            ------------>CBF -------- --->DOF2 --------->ALFIN1        *TSS--------->ZAT6  <-----------GT1 ---------->DOF2   --------->SPL7   gcaaaagtcgagctggagctgtaagtccaacaagagtccaactctactgtcccttttttctttttaaataacaaaagagtcaatcattgggacgaccaaa  9241400                                                                                        --------->YAB1                         ---------->DOF2                                              ------>MYB46(1)            <---------At4g35610                                                       ------>MYB83            --------->At4g35610                                                     <---------MYB46(2)     <-----------GT1 ------>MYB83                                                   <---------MYB59   --------->YAB1    ------>MYB46(1)                                               --------->ANAC46  <---------YAB1  --------->MYB46(3)                       ---------->DOF2       <-----------GT1 --->DOF2   ----------->RAV1(2)              <-----------GT1                  <---------YAB1 ->AtMYB61<---------ALFIN1    <------------CBF        <-----------GT1      <---------YAB1   gacgatgatacctcacctgaaccaacttaaagaattggagtaagtagtaaccattttcaccaaaagtcattccaattctcattataccaaacaaaatgga  9241500                                                        --------->ATHB12                                                    <---------MYB46(3)                                                  >>>>>>>>>ARR1                                                  >>>>>>>>>ARR2                              <-------                                   <---------DAG2 >>>>>>>>>ARR1                  <---------TOE2(3)  <               ---------->DOF2     <----------DOF2>>>>>>>>>ARR2          <-------TEIL      --------->DOF5.7(2)       --------->ARR14(2)       <---------ALFIN1 <------ZmHOX2a(1)     --------->ARR14(2) --------->At5g28300       <---------ARR14(2)     <-----------GT1   <---------YAB1         <---------ARR14(2)--------->TOE2(3)     <---------------AtSPL3 <-----------HVH21--------->ICU4        <---------LBD16       --------->TOE1(3)   attagaaagtatacggctaaagaatttagttgtcacactttattgaaattaggattgttgatttgtttctacggattcatgttgagataaaccgtaaacg  9241600                                                                                               ------                                                                                           <---------           <----------DOF2                                                              ------>NtERF2       <-----------GT1           <---------ARR14(2)                    --------->YAB1 <---------ANAC58    <---------ICU4           --------->At5g28300                      <---------YAB1  <---------ANAC58 --DOF5.7(2)                ----------->GT1                   <---------MYB46(3)      <---------RAP2.6(2) -------TEIL             ------->TEIL   <---------ATHB12      <---------REM1(1)      --------->RAP2.6(3)   agttcatagttacctttggtatctatgaatcggtgaatcccaatctttagccattgtttcagagttgttgccattatagtctaccattgcggccttttta  9241700                                --------->HSFB2a(2)                                               <--                                <---------HSFB2a(2)                                               <--                          <---------ICU4                                     --------->ARR14(2)   ---   --------->WOX13(1)    <---------YAB1                                      <---------ARR14(2)  <--- <---------YAB1    <---------TOE2(3)                                   --------->MYB59  --------->AHL20(2) --->AHL20(2)      <---------TOE1(3)                         --------------------->WRI1 <---------AHL20(2) -DOF2--------->YAB1----------->GT1              <----------DOF2       --------->MYB46(2)       -----   tatatcattcatgttagcattagggttataatttctaaaaattgatcacctctttaacttgtgcctagaatgttaggcagacccagccaaaaaattaagt  9241800  Previous    Next  AGI:  At4g16340.1    Description:  SPK1 (SPIKE1); GTP binding / GTPase binding / binding / guanyl-nucleotide exchange factor. similar to hypothetical protein OsI_011082 [Oryza sativa (indica cultivar-group)] (GB:EAY89849.1); similar to Putative adapter protein SPIKE1 [Oryza sativa (japonica cultivar-group)] (GB:AAN65000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65158.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Dedicator of cytokinesis; (InterPro:IPR010703) Range:  from: 9228202    to: 9241334    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version