Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------ANAC58            <---------ANAC58                   <-----------GT1   ------>MYB83                --------->TOE1(3)     <----------DOF2   ------>MYB46(1)             --------->TOE2(3)------->TEIL                 <----------DOF2 ---------GT1     <---------TOE2(3)         --------------->AtSPL8     --------->At4g35610<---------ATHB12   tcaccaatctccttgcgaatgaggttttgtaaaccctaaatccagttttgaacctctttctctcttccctagtagctctctttctctatccactaattct  9218300                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                     --------->ZAT18         <---------ICU4                                                   <---------WOX13(1)   <---------MYB52(1)                                                 --------->ATHB12      <-------GAMYB                                                <---------YAB1         --------->At5g28300                           <-------TEIL      ------->TEIL              <---------RAP2.6(3)                  ------>ZmHOX2a(1)      <---------TOE2(3)            <---------MYB46(3)  <----------DOF2   agcattttgcatcagtattcctctctgcgttcatttctgttttgatgtatgtgattgccctaatcgtcttggccgttactcatttcgttttccttttact  9218400                                                                                                -----                                                                                                -----                                                                                                -----                         <---------HSFB2a(2)                                             <---------ARR14(2)                <---------ZAT18                                                   <---------ARR11(3)              --------->ZAT2                                                     <---------GLK1(1)              <---------ZAT2                                                     <---------RVE1(1)              --------->At4g35610                                                --------->RVE1(1)              <---------At4g35610                              --------->At5g28300--------->ARR11(3)           <---------ANAC58                                   ----------->GT1    --------->GLK1(1)           <---------ANAC58     --------->TOE2(3)           --------->LBD16     <---------ARR11(3)     <---------TOE1(2)   --------->HSFB2a(2)               <---------ANAC46     --------->ARR11(3)    >>>>>>>ZML2 --------->ZAT18 --------->TOE1(3)  <---------ZAT18      ---------->DOF2  --------->ARR14(2)   ctggttctaggtttcgagctcactctgctagaaaccctaaaaatttgattttgtgaacttcccgtggtaaatttgaaagggagatatctcagaaccccta  9218500       ------->TEIL--------->At4g35610       <---------ARR11(1)       --------->GLK1(2)       --------->ARR14(2)                   --------->HSFC1(2)        <---------ANAC58  <------ZmHOX2a(1)<---------At4g35610      <---------HSFC1(2)        <---------ANAC58 ->MYB46(1)        --------->ZAT14         --------->GLK1(2)    <------------CBF                  >>> ->MYB83 --------->YAB1             <---------At4g35610    ----------->GT1                  <-------- --->P <---------ARR14(2)          <---------TOE2(3)---------->DOF2  <---------ZAT18     <---------YAB1   ccaaggacgaatcttgatcagagcagacttgatttttgaggtgagaagcttagggaaagttttgttaattgtgcgttcgaatttgagagttttgatagac  9218600                                                                                                 <---                                                                                           <---------TOE1(3)                                                                                           <---------TOE2(3)                                                                                           <---------TOE1(2)                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                <------ZmHOX2a(1)                                     <---------AGP1                              --------->ANAC58                                        --------->ARR14(2)                              --------->ANAC58                                        <---------ARR14(2)                        <---------ANAC58                            --------->GLK1(2) <---------ARR11(3)                        <---------ANAC46                           --------->GLK1(1)  --------->ARR11(3)                    <------------CBF                  <------MYB83 <---------GLK1(1)  <-----------ARR10      <------------CBF  <---------ANAC58     <------MYB46(1)===================================HOX2a_HOX2a   <<<<<<<<<<<<<<<<<LFY<---------MYB46(3)    <------MYB83   <------ZmHOX2a(1)         --------->GLK1(2) >>>>>>TAC1        <<<<<<<<<RAP2.2          --------->MYB59 ==================================HOX2a_HOX2a -WOX13(1)        <---------TOE2(3)--------->ICU4     <------MYB46(1)                <------ZmHOX2a(1)   agtgtttacattggaggttttagattgggtgtaaggaataagtagataggtatggatggtaaggagaagaaatctggttccaagagaggatctaaggttt  9218700                      <---------YAB1   ------>ZmHOX2a(2)                      --------->ICU4  --------->GLK1(1)                    --------->YAB1    <---------GLK1(1)                   --------->ICU4    <---------ARR11(3)        ---------->DOF2               --------                   <---------YAB1    <---------AGP1--------->ICU4                --------->DAG2                 <---------At4g35610 --------->ARR11(3)    --------->YAB1        <---------TOE1(3)      <---------TOE2(3)     ------->TEIL           --------->GLK1(2)             <---------TOE2(3) --------GT1  <---------At4g35610   <---------CCA1(2) <---------YAB1         <------ZmHOX2a(1)      <   ttcagtttgacgatgatgctgatgatgatgaacctattggatctctcttagagattatgaagcataaaagttccaagaaggataaggttgagacagaaag  9218800                                                                  --------->CCA1(2)                                                                 <---------ARR14(2)                                                                 <---------ARR11(3)                                                                 --------->ARR11(1)                                                                 --------->ARR11(3)                                                                 --------->ARR14(2)                                    --------->ZAT2       --------->GLK1(2)                   <------ZmHOX2a(1)                                    --------->At4g35610 --------->ARR14(2)          <---------------AGL15                                    <---------At4g35610 <---------GLK1(2)           --------------->AGL15                                   --------->GLK1(2)    <---------ARR14(2)         <-----------------AG                              ---------->DOF2        --------->ANAC58              ----------------->AGL2 -->DOF2                  <---------HSFB2a(2)        --------->ANAC58   ----------->HVH21  <---------TOE2(3) ---------ZAT6            <---------ANAC46   <----------DOF2   ----------->ARR10   ----------------->AGL3   tactggtaaacagaggcagaaacaggttgtggaaaagaagctgagtgctttgggcaaggattctgaagatatggatgacacattagccagttttaggaag  9218900                                               <------ZmHOX2a(1)                    --------->ALFIN1         --------->MYB59<-------GAMYB                 --------->DAG2    --------->TOE2(3)       --------->ALFIN1                        <-               ---------->DOF2     --------->TOE1(3) --------->O2                          <---------             --------->ANAC58   <---------ARR14(2)   <---------O2                         -----------             --------->ANAC58   --------->ARR14(2)--------->MYB46(3)            <---------YAB1   <---      ----------->GT1          <------ZmHOX2a(1)--------->ARR14(2)  ----------->GT1       -----------   aggttgaagggtaacaagaaaggtgttgaatcaggaacctcaagagttaggaaccacgagggtgttgatactgtaacaaattctaatttgaaaccaattg  9219000     ----------->RAV1(1) --------->ANAC58 --------->ANAC58 -----ZmHOX2a(1)       <---------ANAC46                                                <---------HSFB2a(1) ------AGL15       <---------ZAT14                                                     --------->HSFB2a(1) ------>AGL3       <-------TEIL                                                        <---------HSFC1(2) ------TOE2(3)     --------->ZAT14             --------->ABI4(2)               --------->GLK1(2) ------>AGL1      --------->ALFIN1       --------->MYB52(1)                   <---------GLK1(2)   aggaagccaacaaaaacgaggtgcagagtgtattacttagggaaaacggtgcttctaattctattcaaaaatgtgcttcagaaactggaaccctcttgca  9219100                      <---------At4g35610                      <------NtERF2       ----------->GT1                 --------->DAG2          --------->DAG2                ---------->DOF2         ---------->DOF2               --------->CCA1(2)    <---------YAB1                                --------->YAB1             --------->YAB1         --------->AtLEC2                           <----------DOF2          ---------->DOF2         --------->YAB1                      <---------At4g35610      <---------HSFB2a(2)        <---------ATHB12     <---------ARR14(2) <---------At4g35610        <      --------->HSFB2a(2)      --------->ANAC46       --------->ARR14(2) --------->At4g35610 --------   taagttttctggtaaagataaggcagcctctcccagtcatgaaaaagtagaaacagtatccagtgagaaggaagcagatgtctttcatcaaattacaaag  9219200  Previous    Next  AGI:  At4g16310.1    Description:  LDL3 (LSD1-LIKE3); amine oxidase. similar to LDL2 (LSD1-LIKE2), amine oxidase [Arabidopsis thaliana] (TAIR:AT3G13682.1); similar to hypothetical protein OsI_033275 [Oryza sativa (indica cultivar-group)] (GB:EAY79316.1); similar to putative corticosteroid binding protein [Brassica napus] (GB:CAB98166.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61042.1); contains InterPro domain SWIRM (InterPro:IPR007526); contains InterPro domain Adrenodoxin reductase; (InterPro:IPR000759); contains InterPro domain Amine oxidase; (InterPro:IPR002937) Range:  from: 9218652    to: 9225279    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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