Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------ALFIN1                                                                      <------     <---------ETT(1)                                                                       ---------    --------->DEAR3(2)                        <-----------GT1            ------>ZmHOX2a(1)  <-------- <---------ARR14(2)                        ----------->GT1           --------->ARR14(2)    <---------YAB1 <---------ZAT14                 --------->ZAT6                 <---------ANAC58          --------->ARR11(3) -------ANAC46             --------->ZAT6  --------->YAB1       <---------ANAC46 <---------ICU4 -->ZAT14               ------->PIF5 --------->ANAC58           <---------ANAC58 --------->YAB1<----- ---ZAT14               <-------PIF5 --------->ANAC58 ----------->GT1<---------ARR14(2)   <---------ARR11(3)   gtgtataccgacacatctctctagcacttgcactagcactagcaatagtaacaacatggtttatttgtgtgtttcctcttcattcattacaatatcatta  9204600                                 --------->YAB1  <---------MYB55(2)                                <---------YAB1   --------->MYB46(3)                              --------->YAB1   --------->ANAC58                             <---------------AGL15                            ----------------->AGL2   <---------DAG2               --------->AHL20(2)-------->HAHB4--------->ANAC58                        --------->ZAT14   <----------DOF2 <-----------GT1       <---------MYB52(1)    --------->YAB1<---------ANAC46 ---YAB1       <---------AHL20(2)<---------ICU4--------->ANAC46--------->TOE2(3)------->TEIL >YAB1         <---------YAB1--------------->AGL15 ------>NtERF2----------------------->TaNAC69(2) -ICU4  ---------->ID1      <-----------------AGL2<---------ALFIN1           <---------ANAC55(2) ----ICU4   <----------DOF2 ----------------->AGL3--------->RAP2.6(2)        --------->ANAC55(2)   ctactcttttgttcctttttattacaacttactaataatagccattagccagccaccttatgcaatcttatcccttatcacgtatatagtttagtccaaa  9204700                            --------->YAB1                          --------->AtLEC2                    <---------ICU4                    <--------ATHB1                                                     --------->GLK1(2)                    -------->HAHB4                     --------->AHL20(2)       --------->YAB1   ----                   --------->ICU4                --------->ANAC46      --------->AHL20(2)        <---                   <---------ATHB51              --------->ANAC58   --------->YAB1 --------->YAB1<---                   <---------YAB1                --------->ANAC58  <---------YAB1 <---------YAB1<----                 --------->YAB1       ----------->RAV1(1)<-----------GT1   ----------->GT1    -------                --------->AHL20(2)   <----------ID1    --------->YAB1  <---------AHL20(2) -----------   acgttttgttttgctcaaataataattcatgcataaaaaacaacaaaaaacacacaattatacatgctgatcataaattgtattatgagaatttgttaat  9204800                                                                                       <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                   --------->ATHB12                                                                                   ----------->GT1                                                                                  <---------YAB1                                                                                 <---------TOE2(2)                                                                               --------->TOE1(2)                                                                              <---------ANAC55(2)                                                                              --------->ANAC55(2)                                                                             <---------TOE1(2)                                                                             <---------TOE2(2)                                                                             ------->TEIL                                                                             <-------TEIL                                                                          <---------ANAC58  <------MYB46(1)                       --------->ARR14(2)                <---------ANAC58  <------MYB83                          <---------ARR14(2)                <---------ANAC46          - ----->ATHB12                      <-----------GT1                       <---------TOE2(3)          < ------ICU4                     --------->ARR14(2)                  --------->ATHB12 <---------WOX13(1) -----HAHB4<---------YAB1<---------ANAC58                      <-------TEIL<---------SPL7     <------ -----ATHB12             <---------ANAC58        <----------DOF2    <---------AHL20(2)<---------AHL20(2) -->WOX13(1)           <-----------GT1 --------->WOX13(1)  <-------TEIL  <---------------AtSPL3    <- >GT1      <---------TOE2(3)    <---------ARR14(2)  --------->AHL20(2)   --------------->AtSPL3<-----   catttggtatactaacattgcaattttacttgaatatttgccaatctacttcttttatatatacatacatttattgacgtacgtatgattaatttgacga  9204900                               ------->MYC2                               ------->MYC3                               <-------MYC2                               <-------PIF5                               ------->PIF5                               <-------MYC4                               ------->PIF4                             ------->TEIL                  --------->MYB111(2)                                <---------ANAC46                  <---------MYB46(3)    --------->AtLEC2             <---------ANAC55(2)         <---------AHL20(2)    <-------MYC3                   <---------ANAC55(1)       --------->ANAC55(2) <---------ZAT18                    --------->ANAC55(2)       <---------ANAC55(2) --------->ZAT18                    <---------ANAC58 -------->ANAC55(2)        <---------ZAT14                    <---------ANAC55(2)                 --- ---------ANAC55(2)<-------GAMYB     --------->WRKY18(1)      <---------ANAC58                    --- ---ANAC46        --------->MYB55(2)<---------RAP2.6(3)     <-----------GT1                     ----- ------TEIL     <-------GAMYB  <-------PIF4          <-------TEIL    <---------YAB1     <------------CBF ----------AtSPL8<--------P--------->ZAT14  <-----------HVH21<-------TEIL    <-----------TBP    <----   gtacataatatgtaattgggttgttgaagtgcacatgcagtcatgcagtcacacatacatatatacgtgttatgtatgtgtatatagttgaattgtttct  9205000                                                                               <---------YAB1                                                                          <---------ANAC46                                                                          <---------ANAC58                                                                          <---------ANAC58                                        ------>MYB83                    <---------ZAT14                                        -------->P  ----------->GT1     --------->ZAT14                                --------------->AtSPL8                  --------->ZAT18            -- -------->TBP            ----------------->AGL3    ----------->GT1     --------->ALFIN1           <-- ------>AHL20(2)       <----------DOF2  ------>MYB46(1)             --------->DAG2           <------- ---->HSFB2a(2) --------->ZAT6  *TSS  <---------MYB111(1)          ---------->DOF2     <----------ID1 -----HSFB2a(2)<-------TEIL     <---------------AtSPL8         --------->At4g35610   --------->MYB52(1)   ataaatatggacacacatacactagctttctaatatagtaccaactccattgaatgttaaaactcagaagaaagtggagtgatcatataacgacaatgaa  9205100                                                                 --------->MYB46(3)                                                                 <---------ATHB12                                                                --------->ANAC46                                                                ------>MYB83                                                                ------>MYB46(1)                                                                -------->P                                                           --------->GLK1(2)                                                           <-----------ARR10                 ------>ZmHOX2a(1)                         --------->ARR14(2)    <----------DOF2         <----------DOF2            <---------HSFB2a(2) ------->GLK1(2)<---------ANAC46                       --------->LBD16                           ---- -------GLK1(2) <---------ANAC58                       --------->HSFB2a(2)                      ----- --ATHB12       <---------ANAC58            <----------DOF2<---------ARR14(2)       <---------ANAC46   gaatctctttaacttgttccttatgtttttctttgcaatgccaattctttcactctccgagaatccaaccaatttcagcgagagttgcgaagacgggagt  9205200                                                                           <---------At4g35610                                                                   ------>NtERF2   --------->MYB52(1)                                           --------->ZAT2  <---------ARR14(2)                                            --------->At4g35610  --------->ARR14(2)                                            <---------At4g35610              <--- ------->GT1                       <------MYB83           --------->LBD16  --------->At4g35610   ---- ---->ALFIN1   <----------DOF2     <------MYB46(1)      <---------LBD16 --------->LBD16          <---   ggagaaaccggttcaagctttggcatagggttcgatttggttcttgattttggtttataccggaatagctgccccgaagcagagtctatcgtctactcgt  9205300                       ------>ZmHOX2a(2)                       ----------------->AGL3                      <------ZmHOX2a(2)             <-----------HVH21            --------->ALFIN1       <---------At4g35610                           <-----------HVH21      --------->MYB46(3)         <---------RAP2.6(2)                            --------->ANAC58 ------DEAR3(1)      <---------ARR14(2)                                         --------->ANAC58 ----->MYB55(2)      --------->ARR14(2)                                     --------->AtLEC2 ------MYB46(3)     <------ZmHOX2a(1)                        --------->ANAC46   --------->ANAC46   gggtggaaaccacggtgttagaggatccaagaatggctgcttctcttctccgtcttcatttccacgactgttttgtcaatgcaagtcacatctcatctta  9205400                                                                   --------->AHL20(1)                                                                   --------->AHL20(2)                                                                   <---------AHL20(1)                                                                   <---------AHL20(2)                                                         --------->LBD16   <---------MYB52(1)               <---------AtMYB61             <-----------GT1   <------ZmHOX2a(1)     ----------->GT1      <---------YAB1--------->WOX13(1)   --------->AHL20(2)   --------->ICU4 --------->MYB52(2)     <     <---------AHL20(2)           --------->ANAC46      <---------LBD16  <---------YAB1----------->HVH21     --------->AHL20(2)--------->YAB1 <----------DOF2  <---------LBD16<---------AHL20(2)       ------   agtttgttttaatagttttggtctatcatctaatccccgtcttttatataccattgaaccgggaaggattatattatgttagttaaaccgtgacaaatct  9205500  Previous    Next  AGI:  At4g16267.1    Description:  Encodes a Plant thionin family protein [pseudogene] Range:  from: 9204855    to: 9205964    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g16270.1    Description:  peroxidase 40 (PER40) (P40). Identical to Peroxidase 40 precursor (PER40) [Arabidopsis Thaliana] (GB:O23474;GB:Q53XE3;GB:Q67ZY5); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT1G44970.1); similar to class III peroxidase [Gossypium hirsutum] (GB:ABW82529.1); similar to class III peroxidase [Gossypium hirsutum] (GB:ABW82528.1); contains InterPro domain Plant peroxidase; (InterPro:IPR000823); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) Range:  from: 9205032    to: 9206568    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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