Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->ICU4                                                   --------->YAB1                                                   <--------HAHB4                                                   <---------ICU4                                                 ------>MYB46(1)                                                 ------>MYB83                                                --------->WOX13(1)                                            <-----------GT1                                        --------->AHL20(2)                                        --------->YAB1                                     <-------GAMYB   ----------->GT1                     <---------ATHB12    <---------YAB1                 <---------- -------->ICU4                         <---------ATHB51 <---------YAB1               <----------DOF2 -MYB46(1)                        --------->ANAC58 -------->ATHB1              <---------ALFIN1 -MYB83                           --------->ANAC58<---------ATHB12           <---------ALFIN1      -- --WOX13(1)      <----------DOF2  --------->ANAC46--------->ICU4<---------At4g35610------>ZmHOX2a(1)   tactgatgtaaattcaatgctttagagaatgtatacaggcaataatataccaatcattatgtttattgctgactaagagccactcctctttgctgttgca  9171100                --------->CCA1(2)               --------->ARR14(2)               <---------ARR14(2)               <---------ARR11(3)               --------->ARR11(3)               --------->ARR11(1)            --------------->AGL15                               <---------ANAC46            >>>>>>>ZML2                                         <---------ANAC58            --------->HSFB2a(2)                                 <---------ANAC58            <---------------AGL15                            --------->ALFIN1            --------->HSFC1(1)                              <-------MYC3 <---------ARR11(3)            <---------HSFB2a(2)         --------->CCA1(2)   ------->MYC3 --------->ARR11(3)           <-----------------AGL3      <---------ARR11(3)  <-----------RAV1(1)           <-----------------AGL2    <---------YAB1        <---------O2 --------->GLK1(1)      <---------ATHB12             <---------ICU4          --------->O2 <---------GLK1(1) -RAV1(1)  ----------------->AGL3  --------->YAB1  <---------DAG2<---------SPL7 ------->RAP2.6(3)                <---------ATHB12 <----------DOF2 --------->SPL7               -----   attcggcaatcgttctagatatggtttccatttcaaatcatgatatgcattgactttttccatgtggcgttcggaaatctttcatctatactacgtctac  9171200                                           <---------AHL20(2)                                        ------->TEIL                                     --------->ANAC58                                     --------->ANAC55(2)                                     <---------ANAC55(2)                                    <---------TOE1(2)                               --------->GLK1(2)                   <---------AHL20(2)--------->ANAC58                   --------->AHL20(2)<---------ANAC46     <------NtERF2                ----------->GT1<-----------ARR10  <----------DOF2                 ----------->GT1 ---->ANAC46   ----------->GT1<---------GLK1(2)   --------->TOE2(3)           --------->ATHB12   gttgcaagttttgcaaaatgtttaaattagtagaatctcacgtatataaaaactttagtcgccaaattgaaaatggagaatgaatggtaaactactagtt  9171300                                  --------->MYB52(1)                                 ----------->TGA1                                 ----------->HVH21                               <---------ZAT2                   <-----------HVH21                               <---------At4g35610            <-------MYC3                               --------->At4g35610            >>>>>>>>>>BZIP12                             <-----------RAV1(2)              ------->MYC3                         <-----------HVH21                    >>>>>>>>>>ABI5                         <-----------TGA1                    <---------O2                      --------->ARR11(3)                     --------->O2                      <---------ARR11(3)                     <---------TGA1a                ---------                     --------->CCA1(1)                       --------->TGA1a                ---------                     --------->RVE1(1)                  --------->ANAC58                    ---------            --------->At4g35610--------->ZAT2           --------->ANAC58                 --------->LBD16            <---------At4g35610----------->RAV1(2)      --------->ANAC46        <------NtERF2    ----   taccctcatattttagctgaaaaatatcgtcacagctgacgaagaaattagaaacaacaagcaacgtgtcacttctcatgtcgtcgttttccccaagaaa  9171400                              ------->MYC3                              <-------PIF5                              ------->PIF5                              <-------MYC4                              ------->MYC4                              ------->MYC2                              <-------MYC2                              <-------MYC3                             --------->TGA1a                             <--------ABF1                             ================================================MYC_MYB                             =============================bZIP_DOF                      ------>MYB46(1)                      ------>MYB83                    <---------MYB59                   <---------ANAC55(2)            ------------>CBF <---------TGA1a           --------->ANAC46  --------->O2           --------->ANAC58  <---------ANAC46              --------->ANAC58                         -     <---------MYB52(2)      <---------ANAC55(2)       --------->ANAC58              ---------->DOF2= >ANAC46   --------->ANAC58  --------->ANAC55(2)   <-----------GT1                *TSS             <- >ANAC58  ------->GAMYB      <---------O2--------->ZAT6--------->ANAC58         ---------->ARF1    <- >ANAC58  =============================MYC_MYB <----------DOF2  <------------MYB.PH3(1)            -- ----->CCA1(1)     --------->ANAC55(2)   <---------ALFIN1  --------->ANAC58     ---------->ID1------>ZmHOX2a(1)   tatccaaactaacacccaattacctaatgccacgtgtttactcacactcctttaaacaagctcgtaactgtttcatcttcttgtccccaaagtctcctct  9171500                                                                                                  ---                                                                                             <-------                                                                                          <---------MYB52(1)                                                                                         <-----------TGA1                                                                                      -------->P <---                                                                                      <---------At5g28300                                                                                    ------>ZmHOX2a(2)                                                            --------->ANAC55(2)    <------ZmHOX2a(2)                                          <<<<<<<<<TBF1     <---------ANAC55(2)   --------->ARR11(3)                                 <---------AtMYB61         <-------TEIL           <---------ARR14(2)   <---------CCA1(2)         ------>ZmHOX2a(2)          <---------At4g35610       --------->AGP1<---- <---------CCA1(2)           <---------ANAC58           <---------ZAT2            <-----------ARR10 ----->ZmHOX2a(1)            <---------ANAC58           --------->ZAT2            --------->ARR14(2) ===================================HOX2a_HOX2a         --------->At4g35610      <---------CCA1(2)--- --------ANAC58              <---------ANAC46          <---------TOE1(2)      <---------LBD16-------- --------ANAC58              ==========================HOX2a_HOX2a      <---------GLK1(2)<-----------HVH21 ------->TOE2(3)           <---------ARR14(2)   ------>ZmHOX2a(1)     <---------TOE1(2) >>>>>>>>>>AtTINY2   tccttatctcttggaaaccaagaagcatggatcgtgtggtcttcttcttcctcatcgcagctacgttactagcaggttctctcggatctaccgtcatctc  9171600                             ===========================HOX2a_HOX2a                             <------ZmHOX2a(2)                        ----------------->AGL1                        <-----------------AGL1                        <-----------------AG                    --------->DOF5.7(2)                    <---------MYB52(1)      <---------HSFB2a(2)                   --------->TOE1(3)        --------->HSFB2a(2)          ------------>AtMYB77             <---------LBD16        --------->DEAR3(2)  <-----------HVH21--------->LBD16 --->NtERF2        --------->TOE2(3)       <---------HSFB2a(2) --At4g35610      <---------ANAC46         --------->HSFB2a(2) ------DEAR3(1)--------->ARR14(2)       <---------SPL7                   ------->GAMYB<---------ZAT18 -----LBD16    <---------ARR14(2)       <-----------HVH21               --------->ANAC46 ------>LBD16<---------DEAR3(2) --------->ANAC58             --------->MYB46(3)       <---------ZAT14 ->At4g35610 <---------MYB46(3) --------->ANAC58 <------ZmHOX2a(1)  ------>ZmHOX2a(1) --------->ZAT14   cggcgaggttaccgacggtttcgttaacccgatcaggcaagtcgtcccggaggagaacgatgaacaactcctcaacgcagaacatcacttcactctattc  9171700                                                                                                    <                                                    --------->LBD16                                 -                                                   <---------ANAC55(1)              <---------ANAC58<                                   --------->ZAT18 <---------ANAC46                 --------->ANAC46-                      --------->ANAC46             --------->ANAC55(2)              <---------ANAC58<                    --------->ANAC55(2)            <---------ANAC58           <---------ZAT2     ----                    --------->ANAC58               <---------ANAC58           <---------STY1(2)  <---                    --------->ANAC58            --------->ARR14(2)            --------->ZAT2 <-------                    --------->ANAC46          <---------DEAR3(2)     --------->TOE1(2)      ---------                    <---------ANAC55(2) <---------ARR11(3)           --------->TOE2(2)      <--------         <---------HSFB2a(2)       <---------ZAT18 <---------ANAC55(2)    <-----------------------TaNAC69(2)         --------->HSFB2a(2)    ---------->DOF2 <---------ARR14(2)   --------->TOE1(3) --------->ARR14(2)        <---------TOE1(1)      <--------P<------ZmHOX2a(2)  ---------->DOF2   --------->STY1(2)  ----        <---------TOE2(1)  <-----------RAV1(2)<---------MYB46(3)     --------->TOE2(3) <---------ARR14(2)   aaatccaagtacgagaagacttacgcgactcaggtagagcacgatcatcggttccgtgtcttcaaagctaacctaagacgagctaggcgtaaccagcttc  9171800                        --------->ANAC58                        --------->ANAC58                     --------->ATERF1(1)             <---------WRKY12           --------->ORA47(1)           ------>NtERF2--------->ANAC46           <---------RAP2.6(3)           <---------SPL7          <---------ANAC58                                  ------>NtERF2          --------->DEAR3(1)                                --------->LBD16          --------->ATERF1(2)                               <------NtERF2          <---------ANAC46                                 --------->RAP2.6(2)     <---------MYB52(1) --------->ANAC55(2)                --------->DEAR3(1)    <-----------HVH21----------->HVH21                     --------->ANAC46  ------>ZmHOX2a(2)  <------NtERF2                         --------->RRTF1(2)  <-------TEIL      ------>NtERF2                          --------->RAP2.3(2) <------ZmHOX2a(2)  <-----------HVH21<------ZmHOX2a(2)     --------->RRTF1(3) ---------ARR14(2)  <-----------TGA1--------->AGP1         --------->RAP2.3(3) -------->ARR14(2) <---------bZIP60(1)         ---------->DOF2 ---------ARR11(3) --------->bZIP60(2)        --------->LBD16 -------->AGP1     --------->bZIP60(1)------>ZmHOX2a(2)   --------->RRTF1(1) ---------AGP1<---------ALFIN1      <---------AGP1  <---------GLK1(1) ----->HSFC1(1)<---------LBD16      <---------ARR11(3)    --------->RAP2.3(1) ------HSFB2a(2)--------->ANAC46    <-----------ARR10    --------->LBD16                    <-------- --GLK1(2)<---------ANAC58          <---------ARR14(2)   ------>NtERF2                      <-------- >ZAT2  <---------At4g35610         --------->ARR14(2)  --------->ANAC46            ------>NtERF2   - -ZAT2  --------->At4g35610         --------->ARR11(3) <---------LBD16             --------->DEAR3(1) ----->HSFB2a(2)<---------DEAR3(1) <---------CCA1(2)--------->GLK1(1)   <------ZmHOX2a(1)   <--------   tagatccgtctgccgtccacggcgtcacgcagttctcagatcttactccgaaagaattccgccgcaagtttttaggactgaaacgccgagggtttcgtct  9171900                                                                                    ----------->GT1                   <------NtERF2                                                  ----------->RAV1(2)                  ------>NtERF2                                             <-----------HVH21                --------->ATERF1(1)                                         <---------RAP2.6(3)                <------NtERF2                                              >>>>>>>>>AtERF-3                --------->RAP2.3(1)                                        --------->DEAR3(1)               <---------ATERF1(1)                                         --------->RAP2.6(2)               <---------RAP2.3(1)                                         --------->RAP2.3(2)               <---------ORA47(2)                                          --------->RAP2.3(3)               <---------DEAR4(2)                                          >>>>>>>>>AtERF-4               <---------RRTF1(1)                                         <------NtERF2              --------->ANAC46                         --------->ATHB12   --------->ATERF1(1)              <---------RAP2.3(3)                  --------->GLK1(1)      --------->RAP2.3(1)   <---------ZAT6--------->DEAR3(1)         ----------->HVH21            <---------ATERF1(1) -ANAC46      <---------RAP2.3(2)       ------>ZmHOX2a(2)    <---------ANAC58   <---------ALFIN1 -ANAC58      <---------DEAR3(1)       <------ZmHOX2a(2)     <---------ANAC58----------->HVH21 ----->ZmHOX2a(1)<---------DEAR3(1)   <---------ARR11(3)     <---------ANAC46<------NtERF2 -ANAC58     --------->SPL7           --------->ARR11(3)    <-----------------------TaNAC69(2)   tcctactgatactcagacggcgcctattcttccgactagcgatcttccgacggagttcgattggcgtgaacaaggagccgtcacacctgttaaaaaccag  9172000  Previous    Next  AGI:  At4g16190.1    Description:  cysteine proteinase, putative. similar to RD19 (RESPONSIVE TO DEHYDRATION 19), cysteine-type peptidase [Arabidopsis thaliana] (TAIR:AT4G39090.1); similar to unknown [Populus trichocarpa] (GB:ABK92924.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201) Range:  from: 9171482    to: 9173120    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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