Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                              -------                                                                                              -------                                                 <---------WRKY38(1)                         --------    --------->AHL20(2)                           <---------WRKY12                            <------- -------->ATHB12                                --------->WRKY18(1)                        <---------ICU4 --------YAB1      --------->YAB1              <-----------HVH21                           --------->YAB1 --MYB59       ---------->DOF2                <------MYB46(1)                             --------->ICU4 ->AtSPL3    <---------YAB1                   <------MYB83                                <---------ATHB12 --AtSPL3 --------->AHL20(1)                 --------->MYB59                              <---------ATHB51 --AtSPL8--------->AHL20(2)             <---------YAB1          <-----------GT1           --------->AHL20(2) ->AtSPL8--------->YAB1               --------->YAB1--------->MYB46(3)    <---------YAB1  <---------AHL20(2)   tttcattgaaataatattaaagcataaattcagtaccgaagtataattaggtcaaccgatgtaattttacaaaactatatttgaaaatacaaataattat  9147800                                                                                <---------ICU4                                                                        ----------->GT1                                                                        <---------ANAC46                                                                  --------->AHL20(2)     ----------->GT1                                                            ----------->GT1    --------->ICU4                                                  <---------ARR11(3)    <---------ANAC55(2) ------>DOF2                                      --------->ARR11(3)    <---------ANAC55(1) -->AHL20(2)                       <---------AHL20(2)      <---------TOE2(3)  <---------AHL20(2) -->YAB1                          --------->AHL20(2)       <---------TOE1(3) --------->YAB1 ->ICU4                          <---------MYB52(1)      ---------->DOF2--------->ANAC55(2) --YAB1                  --------->AHL20(2)       --------->GLK1(2)    <-------TEIL      <---------ANAC46   aaagagaagttttaatcgaattccaaaataaatccattaattttaaaccaaaaatcttataaaggttataaaatacgtataaaaattagttttgtgaaaa  9147900                                                       ----------->GT1                                                      <---------TOE1(3)                                             <---------AHL20(2)                                           --------->YAB1                                  --------->At5g28300 <---------TOE2(3)                                 ----------->GT1<---------TOE2(3)    --------->AHL20(1)             <                             <---------ZAT14 --------->AHL20(2)      --------->ARR11(3)          ----                     <-----------RAV1(2) --------->AHL20(2)   ---------->DOF2            <---------DOF5.7(2)                   <-----------HVH21    --------->YAB1<---------YAB1 <---------AHL20(1)  --------->MYB52(1)   catatatcaaatgttttagggggtcagggtgtaaactgtgaataaaaataaatgttatggtaaaaaaagaatattttgtttttatgcgagttaacgcata  9148000           <---------MYB52(1)          --------->LBD16          <-------GAMYB         <---------ANAC46                                                         --------->YAB1         <---------ANAC58                                                        ----------->TBP         <---------ANAC58                                                      --------->YAB1      <---------ARR14(2)                                                   <---------AHL20(2)   -----      --------->ARR14(2)                            <-----------GT1        --------->AHL20(2)   ----- ------->TEIL                                   <----------DOF2           <---------AHL20(2) -------- -----------GT1   --------->TOE2(3)         <-----------GT1            <---------AHL20(2)    -------- ----------->AtSPL8  ----------->RAV1(1)   <---------AHL20(2)          --------->AHL20(2)    <-------   atgtaccagttccgttgaatcgtcaacacaagagtcacaaacaaatttatcttttaacaaatttctctcttaaaaaattatttataaaaactctgagctc  9148100                 ---------->ID1      <---------RVE1(1)     <---------GLK1(2)     --------->ARR14(2)    <---------ICU4     <---------ARR14(2) --------->YAB1 ---->ANAC58     <---------CCA1(2) ---->ANAC58   <---------ANAC58       <---------GLK1(1) ->ZAT2        <---------ANAC58       --------->GLK1(1)   --------->ZAT6             <----------DOF2 ->At4g35610 <-----------GT1     <---------At4g35610    <-----------GT1           <-----------GT1  << --ZAT2 <---------AHL20(2)<---------YAB1  ------------>CBF<-----------GT1 ----------->GT1------------   gaaatcggatttttttttcgtctctctcatcattttgctgatttctcaatttctgtgtttacactactccatcgacttgtaatttcactttcttagggtt  9148200                                                     --------->LBD16                                                     ------>NtERF2                                                    <---------LBD16                                                    <---------ETT(1)                     --------->ARR14(2)            --------->RAP2.6(3)                     ------->TEIL          <---------DEAR3(1)                     <---------ARR14(2)    <---------ANAC46                     <---------ARR11(1)   <------NtERF2                     --------->GLK1(2)   <---------ATERF1(1)                    <---------ARR14(1)   ------>NtERF2                    <---------CCA1(2)   --------->ATERF1(2)          <------ZmHOX2a(2)             <---------ATERF1(2)         <---------ARR14(2)             <---------DEAR3(1)         --------->ARR14(2)    --------->LBD16     <---------LBD16     <---------At4g35610     <---------LBD16<-------GAMYB      --------->RAP2.6(3) <<<<<<<TBF1 --------->At4g35610       <---------ORA47(1)--------->ANAC58 --------->WRI1   --------->RAP2.6(2)  <---------LBD16   --------->ANAC58   <-------TEIL   <---------   cttcttcatcggatcatcggccgtatctgaaaccggagatggccggcgttgattccggcaagcttatcggctctgagattcatggattccatactttaca  9148300                                                                                   --------->ATHB12                --------->At4g35610                                              --------->HSFB2a(2)                <---------ZAT2      --------->YAB1                          <----------DOF2     <---------ANAC58          <---------YAB1                            <-----------GT1     <---------ANAC58   <---------MYB52(1)                               ---------->ID1            <-    ---------->ID1    ------>ZmHOX2a(2)--------->AHL20(2)<------------------------ANAC81       <----- -DOF2          <---------At4g35610<-------TEIL      <---------LBD16    <-----------GT1    <---------   aggtttgtcgttcttctaagctgatcgttcgtcttgattcataaattcgattgtctctgggttttagttttttttttccttttctcgattgctctttgat  9148400                                                                                               <-----                                                                                               <-----                                                                                     --------->LBD16                                                                ----------->GT1     <---------LBD16         --------->WRKY12                                   <---------TOE2(3)    <---------ARR14(2) < --------HSFB2a(2)                                       <---------AHL20(2)      --------->GLK1(2)<-- ----GLK1(2)     <---------GLK1(2)                       --------->AHL20(2)  --------->YAB1    ------ -DOF2<---------MYB46(3)                        <----------DOF2--------->ALFIN1  --------->ARR14(2) <   tctcgtagccgttgaactagaatttgtagatagttatggaattggagagtctttgtgattttaatgtggtgatttggaataagaatccagggacatttag  9148500 ----TOE1(3)                                                                                     <--- ----TOE2(3)                      --------->ARR14(2)                                  --------->ARR14(2) ------MYB83                      <---------ARR14(2)           --------->GLK1(2)      <---------ARR14(2) ------P                   <---------TOE2(3) <-------TEIL     <---------GLK1(2)       <---------ZAT18 --->MYB59    ----------->GT1     ------->TEIL  <---------MYB52(1)                    --------->ZAT14 ------MYB46(1)        <----------DOF2--------->At4g35610 ---------->DOF2             <---------ZAT14   gttggccaatcgaatatagaaaatactttgatgttgaatctgctaaattcgttttttttgtaaagaatcgttgaagagcatgtctcagtatactcagagt  9148600                                                                         ------>ZmHOX2a(1)                          --------->ARR11(3)                             --------->LBD16                          <---------ARR11(3)                  --------->AHL20(2)               <---------ARR11(3)                       ----------->GT1 <---------LBD16               --------->ARR11(3)                   --------->ARR14(2) ----------->RAV1(2)              --------->YAB1    --------->At4g35610 <---------ARR14(2) <---------ANAC46       -------  --------->TOE2(3)       --------->AHL20(1)   <-------TEIL   <---------AHL20(2)          <---------MYB46(3)  --------->YAB1      ---------->DOF2------->TEIL  <------ZmHOX2a(1)   =========================RAV - ----TEIL    <---------YAB1--------->CCA1(2)  --------->CCA1(2)<---------AHL20(2)   <-----------RAV1(1)   tcattcttaattcatatgatattgaaaagatattagatgaatccatagatacaggaacttgtaattaaatgtttcctggagtttttttgttgttgttgat  9148700  Previous    Next  AGI:  At4g16150.1    Description:  calmodulin-binding protein. similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT3G16940.1); similar to Os07g0490200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059672.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70197.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44888.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048); contains InterPro domain CG-1 (InterPro:IPR005559); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 9148239    to: 9153064    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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