Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ARR14(2)                                                       <---------ARR14(2)                                                     --------->LBD16                                -                                                    --------->HSFB2a(2)                            --                                                    --------->ANAC55(2)                            --                                           --------->ANAC58                                      <---                                         ---------->DOF2                                     --------        <---------ATHB12         --------->ANAC46   <---------HSFB2a(2)                    --------->At4g35610      --------->WOX13(1)      --------->ZAT14       --------->ANAC46                       <---------At4g35610 ->ANAC58                     <---------ZAT14      <---------LBD16                         ---------- ->ANAC58                 <------ZmHOX2a(1)--------->ANAC58  --------->ZAT14             --------->YAB1   accagcatcaatcacttcttcaatcggaggactacgctcaatagaaagcaatttccggaactgagtagtcgcttcaagctgtaaacttctatcatctgac  9136800           --------->AtMYB61           --------->TOE2(3)           --------->TOE1(3)         ------>MYB83         ------>MYB46(1)         -------->P                                                                         ---------        --------->MYB55(1)                                                                 <---------ARR14(2)       --------->DEAR3(1)                                                                 ===========       <---------MYB111(2)                                                                <------ZmHOX2a(1)       <---------MYB46(2)                                                               <---------TOE2(2)       --------->AtMYB61                                                                <---------TOE1(2)       <---------MYB111(1)                                                             ==============       --------->MYB46(3)                                                              ==============       <---------MYB55(2)                                                              ------>ZmHOX2a(1)      --------->MYB46(3)                                                              --------->TOE1(2)    --------->AtMYB61                                                                 --------->TOE2(2) --------->ANAC46                                                                  --------->ARR14(2) -------->MYB46(3)                                                                 <---------ARR14(2) ---->MYB46(1)    --------->ANAC58                                              --------->YAB1      - ---->MYB83--------->YAB1                                                      <---------ATHB12     < ------MYB59      --------->ANAC58                                            ------>MYB83=========== --->HVH21--------->MYB46(3)               --------->AtMYB61                  ------>MYB46(1)    ---- ->RAV1(2)<---------ATHB12      <---------MYB52(2)     --------->YAB1        --------->WOX13(1)  <---   caaacaccaccaaccatagcaggcaaactctccaactagccaaaaccaaaaccaaaatcaaaatcgaatcgatctaaaccaatcaaatcctaggaaacgg  9136900         ----------->GT1     ------>ZmHOX2a(2)    <------ZmHOX2a(2)   <---------ARR14(2)   --------->ARR14(2) >MYB52(1) ==========HOX2a_HOX2a ===========HOX2a_HOX2a                                                           <----------DOF2 ==========HOX2a_HOX2a                                   <------ZmHOX2a(1)       <---------ANAC58 -------->HSFB2a(2)                                 <------ZmHOX2a(1)   --------->At4g35610 ---------HSFB2a(2)          ----------->RAV1(1) <-----------RAV1(2)    <---------At4g35610        <- ===========HOX2a_HOX2a      ================================RAV      <--------P <---------ANAC58  -- ----->ARR14(2)           --------->HSFB2a(2) <------ZmHOX2a(1)    <---------TOE2(3)               -- ------ARR14(2)  <-----------GT1      <---------REM1(1)--------->ALFIN1 <---------ZAT2         ------   ttccagatcgctagtaatattacctcttctccaacagttgatgaagcaggaacaggagaggagcgaattgaggtagctgattagcttgaaggccttcacg  9137000                                                                                          <---------ALFIN1                                                                                        --------->ABI4(1)                                                                                        ------>NtERF2                                       ==============================HOX2a_HOX2a       --------->ANAC58                                       =======================HOX2a_HOX2a              --------->DEAR4(1)                                       ------>ZmHOX2a(2)                               --------->DREB2C(2)                                      ========================HOX2a_HOX2a              --------->RAP2.6(2)                                      ===============================HOX2a_HOX2a       --------->DEAR3(1)                                     ------->TEIL                                      ------->GAMYB                                     <---------ARR14(2)                                --------->ANAC46                                     --------->ARR14(2)                                --------->ANAC58              <----------DOF2        <-----------ARR10                                --------->MYB46(3)            <---------At4g35610      --------->ARR11(3)                              <---------At5g28300       --------->HSFB2a(2)        --------->ANAC55(2)                               <---------ALFIN1       <---------HSFB2a(2)        <---------ANAC55(2)                              --------->MYB46(3) --------HSFC1(2)     --------->ANAC58--------->GLK1(1)                        --------->At4g35610 ------->HSFC1(2)     --------->ANAC58<------ZmHOX2a(2)                     ------>ZmHOX2a(1) ------->HSFB2a(1) <---------REM1(2) <---------AGP1           ------>ZmHOX2a(1)<---------At4g35610 --->ANAC46 --------->At4g35610  <---------LBD16       ------>ZmHOX2a(1)   --------->TOE2(3) <-------   acgcttcttctgtaagctttcttcacgcttactcttacggatctcgaccatgttgtcctctctcctccgtcttccttcctcagcatccaccgccactttg  9137100                                                                        <---------ANAC58                                                                        <---------ANAC46                                                           --------->HSFB2a(1) <------NtERF2                                                           --------->GLK1(1)   --------->At5g28300                                                          <---------ARR14(2)  <---------MYB46(3)              --------->TOE2(3)     ---------->DOF2       --------->GLK1(2)  <---------DEAR3(1)       --------->LBD16        <------MYB46(1)             ------->TEIL  <---------ANAC58       ------>NtERF2          <------MYB83                --------->ARR14(2) <---------ANAC46      <---------ANAC46       --------->MYB59              <-----------ARR10  <---------DREB2C(2)     <---------LBD16        <---------MYB55(1)           <---------GLK1(2)  <------NtERF2   <---------ARR14(2)      <---------MYB52(1)   <------NtERF2   ------>ZmHOX2a(1)   --------->ARR14(2)    <---------ANAC58      <---------MYB46(3)    <---------ANAC58 <---------MYB46(3)      <---------ZAT6       <---------RAP2.6(2)    <---------ANAC58 ---DOF2    ------->TEIL <---------ANAC58 ----------------------->TaNAC69(2)<---------ABI4(1)    ----   tagcggttccggcgaacctcagtcttagcgttaggtctcaaagacatggtggctaatacgaatctcctcttgcttcgtggcggtgaatgaaaaatgagcc  9137200                                                          <------MYB46(1)                                                          <------MYB83                                                         <---------AtMYB61                                                        <---------WOX13(1)                                                       <------------CBF                                                       <---------ARR14(2)                                                       --------->ARR14(2)                                                      <------NtERF2                                                 <---------DEAR3(1)                                <XXXXXXXXXXXXXXXXXXXXMIR416                                --------->DAG2 --------->ARR14(2)          --------->TOE1(3)                        <---------AHL20(2)     <---------ARR14(2)          --------->TOE2(3)                 ------->TEIL  ---------->DOF2 --------->GLK1(2)    --------->YAB1     --------->ALFIN1 <-----------TBP         <---------GLK1(2)  <------ZmHOX2a(1)              ----- ----->MYB52(1)*TSS  ------->TEIL     ------->TEIL <---------LBD16 <---------YAB1        <---------ANAC46   aacgagagtggagacgatgtatgtatatatatgaaaagtgtatgtatagaatcggcggattggtagaggatgataaaccctaaatgaagtagaggggaac  9137300                                                                                 <-------TEIL                                          <------MYB46(1)                       --------->CCA1(2)                                          <---------MYB46(3)                    --------->ARR14(1)                                          <------MYB83                         --------->ARR11(1)             --------->DAG2              <---------TOE1(2)                     <---------ARR14(2)       <------ZmHOX2a(1)                 <---------TOE2(2)                     --------->ARR14(2)      <----------ID1                    <---------MYB52(1)                     <---------GLK1(2)      ----------->GT1                  <-------GAMYB                         <---------YAB1     ----------->GT1                  <---------ANAC58             --------->TOE2(3)              <-- ---------->DOF2                      <---------ANAC58      ----------->GT1  <---------TOE2(3)    --- ------>GT1---------->DOF2  --------->ATHB12               --------->MYB59   <---------TOE1(3)   ----   gagaaaagaggaaaaaaggcacagagagaaagattgaatttcgttggtttacaaaaacattttggtaaatctaaattttaagattcgatacagagaccat  9137400                                                         --------->AHL20(2)                                                        <---------AHL20(2)                                                       <---------AHL20(2)                                                   --------->AHL20(2)                                                   <---------AHL20(2)                                                  <---------AHL20(1)                                                  --------->AHL20(1)              <---------ANAC58                    <---------AHL20(2)              <---------ANAC58             ------>MYB46(1)           --------->WRKY12                ------>MYB83--------->AHL20(2)  <-----------GT1                        --------->MYB46(3)  <---------AHL20(2)                     --------->DREB2C(2)  --------->AHL20(1) -------AHL20(2)                         --------->DEAR3(1)   --------->AHL20(2) ------>AHL20(2)                <----------DOF2   --------->AHL20(2)                                - ----->AHL20(2)         --------->ATHB12--------->DEAR3(2)    <---------AHL20(2)                <----   taatttacttaagttgacttgtttattcattagtcttttcgcaccgactaaatttaatttaaaataaaatacagttttttttttggcaaaacttggtttt  9137500                      --------->AHL20(1)                                           <---------ANAC55(2)                      <---------AHL20(2)                                      <------ZmHOX2a(1)  ----------->GT1     <---------AHL20(1)                                    <---------TOE2(3) --------->DOF2  --------->AHL20(1)                <---------ARR11(3)  <---------ANAC46 -----ANAC46---------->DOF2      <---------TOE2(3) --------->ARR11(3) <---------TOE2(3)             <   gtgaaagtaattttaaaagtatattatattcgtttaagaaagtttagagtagagaacttcgcatttgagtttgacgttgaggaagacgtatgagcaatgc  9137600                     <-------GAMYB                    --------->MYB55(2)                                          <---------MYB52(1)               <-------TEIL                                                --------->ARR11(3)             --------->ARR11(1)                                            --------->GLK1(2)             <---------GLK1(2)                                             <---------ARR11(3)             --------->ARR14(2)                                            <---------ARR14(2)             <---------ARR14(2)    --------->ATHB12                        --------->ARR14(2)           ----------->ARR10      <---------YAB1                      ----------->GT1          <--------P<---------DEAR3(2)                              ----------->GT1        <---------ANAC46        --------->MYB52(1)   <--------P     --------->At4g35610 --------->ARR11(3) <---------MYB46(3)       ------->TEIL         <------ZmHOX2a(1) <---------AHL20(1) --------->MYB52(2)    --------->ANAC58     <---------HSFB2a(2) ---------CCA1(2)   <-----------RAV1(1)   --------->ANAC58     --------->HSFB2a(2)            <------   tcatatattggggtagattcgtctgttggagccataacgattgcaagtacctctggtagcattatctaggaggtgaaaatctgttattctctctccgttc  9137700  Previous    Next  AGI:  At4g16143.1    Description:  importin alpha-2, putative (IMPA-2). similar to AT-IMP (Arabidopsis thaliana importin alpha), protein transporter [Arabidopsis thaliana] (TAIR:AT3G06720.1); similar to AT-IMP (Arabidopsis thaliana importin alpha), protein transporter [Arabidopsis thaliana] (TAIR:AT3G06720.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO44871.1); similar to importin alpha 2 [Capsicum annuum] (GB:AAK38727.1); similar to Impa2 [Nicotiana benthamiana] (GB:ABM05488.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro Range:  from: 9133951    to: 9137215    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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