Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    ----------->RAV1(2)                             --------->YAB1                             --------->TOE1(3)                                             --------->ANAC55(2)                             --------->TOE2(3)      <---------TOE2(3)                      <---------ANAC55(2)                          --------->YAB1     ----------->GT1                            <------ZmHOX2a(2)      --------->YAB1   --------->YAB1    --------->WOX13(1)           --------->YAB1   <---------ARR11(3) ------->DOF2    ----------->GT1<-----------GT1 --------->YAB1  --------->ANAC46       --------->ARR11(3)   aaaaggcatcataaaaacagtgtaacaataatcttaacctgatcaattagtaataaggcttcaaacacagaatcaaaacaaaacatagagatcacataac  9132500                   <---------WOX13(1)             ----------->RAV1(1)             ------->GAMYB             --------->AtMYB61                                                             ------->GAMYB            --------->MYB46(3)                                                          ----------->RAV1(1)           -------->P                                                             ------>MYB83          --------->WOX13(1)                                                      ------>MYB46(1)  <---------AHL20(2)                                                   <----------ID1--------->ANAC58  --------->AHL20(2)                <---------CCA1(2)              --------->WOX13(1)--------->ANAC58   aaatttaaatatcaaccacagattgacacaaacctcgcatacctagactatgtatacacatgatcacatcaatgagacaaaacccactagcaacagagct  9132600                 --------->REM1(1)                ------>MYB83           <---------MYB59            ------->TEIL             ------->TEIL    ------>ZmHOX2a(2)         <------ZmHOX2a(2)       <---------------AtSPL8            --------->TOE1(3)        --------->ARR11(3)   >>>>>>>>>GATA-3        <------ZmHOX2a(2)        <---------ARR11(3)   >>>>>>>>>GATA-4       --------->AGP1  --------->TOE2(3)          -------  --------->ANAC58           >>>>>>>>>GATA-1       --------->ARR11(3)                    ----------->GT1  --------->ANAC46           >>>>>>>>>GATA-2       <---------AGP1--------->ARR11(3)     ----------->GT1  --------->ANAC58           <---------ARR14(2)    <---------ARR11(3) ---------->DOF2 <---------TOE1(3) --------->ZAT18------>MYB46(1)  --------------->AtSPL8          <---------ARR11(3)   <---------TOE2(3)   aagcacacaagatcaacctacattttaagtggattcaagtacctatttgactagatctaacacatgagaccttaaagcttggatttttaagggtttaaaa  9132700                                                                                   <---------WRKY38(1)                                                    ------>NtERF2                 <---------ATHB12                                                   --------->ANAC46               --------->MYB46(3)                            <----------DOF2        --------->ANAC58              --------->ANAC58                        ------>ZmHOX2a(1)          --------->ANAC58              --------->ANAC58                      <---------ICU4             --------->AtMYB61            --------->LBD16                      ------>ZmHOX2a(2)          <---------ALFIN1            <---------ANAC55(2)                     <---------YAB1          <-------TEIL                    --------->ANAC58                    <---------ARR11(3)      --------->TCP16(2)               --------->ANAC58                    --------->ARR11(3)     <---------ARR14(2)                --------->ANAC55(2)                  <---------YAB1       <---------ZAT2                 <---------ANAC58    <---------CCA1(2)                --------->YAB1        --------->ANAC58                <---------ANAC46   ------->TEIL               <------ZmHOX2a(2)      --------->AtLEC2                <---------ANAC58--------->ANAC58               ================HOX2a_HOX2a --------->ARR14(2) <------ZmHOX2a(1) --------->WOX13(1)              <---------ARR11(3)      --------->ANAC58  ---------->DOF2     <---------LBD16 --->DOF2     --------->ARR11(3) <----------ID1 --------->ANAC46    ------>ZmHOX2a(1) --------->ANAC58   gaaaatggtagagagagatcatgatccttactttagggccaagcaggtccaccacgccaaaagaggagtcctgcttgttccgcaatcaacgcatgtcttc  9132800                                                              --------->DEAR3(1)                                                            --------->LBD16                                                           --------->ANAC46                                                      --------->HSFC1(2)                                                      <---------HSFB2a(1)                                                     --------->GLK1(2)                                                     <---------ARR14(2)                                                     <-----------ARR10                                               <---------SPL7<------NtERF2                                              --------->TOE2(1) <---------ARR14(2)               <---                                              --------->TOE1(1) --------->ARR14(2)             ------                                        --------->ETT(2)  --------->MYB46(3)                  <------                                     --------->WRKY38(1)  <---------LBD16                    --------                <---------ALFIN1    <---------MYB52(1)--------->HSFB2a(1)                    <-------          <---------ALFIN1         <-------GAMYB     --------->ARR14(2)     ---------->ID1   <-------       --------->AtMYB61      <---------ARR14(2)     ------->TEIL     <---------ZAT2        ---------      --------->At4g35610 --------->ZAT14   --------------------->WRI1--------->ZAT2    <---------ANAC58 <---------CCA1(2)        <---------ZAT14  --------->REM1(1)------>NtERF2<-------TEIL   <---------ANAC58   ttcgtatcacctccacttccactgctactacagttcccgttgtctacatcggacgaatctcccgccgattcgagcttcgtcgtcttggtttcttccgtca  9132900                                    --------->ICU4                                    <---------YAB1                          <---------YAB1                        <---------ICU4                        --------->AHL20(2)                        -------->ATHB1                        <--------HAHB4 ------WOX13(1)         --------->ATHB51 --->ATHB12            --------->ICU4           --------->ANAC58 ---MYB52(1)           <---------ATHB51         --------->ANAC58       <------ZmHOX2a(2) ->LBD16               <---------YAB1--------->YAB1          <------ZmHOX2a(2)              <-------- ----HVH21         ------------>CBF<---------ARR11(3)      ===================HOX2a_HOX2a  ------>ZmHOX2a(2) ----TGA1---------->DOF2--------->YAB1          --------->ANAC46      --------->ARR11(3)   ========== >ANAC55(2)    ---------->DOF2 --------->ANAC55(2)         <------ZmHOX2a(1)         <------------CBF   ttgacatctacaaaagaaaaagacaattattaaacgtgatcatcaactacaagtaagagaaggatcaaaaacgatcatggaaactcacattgatccactt  9133000                                                                  <------NtERF2                  <---                                                          <---------ARR14(2)      <---------ARR11(3)           <------------CBF                             ------->GAMYB             --------->ARR11(3)       --------->CCA1(2)                              >>>>>>>>>MYB98      <------ZmHOX2a(2)   <------ -ALFIN1  <------ZmHOX2a(1)                          --------->MYB52(1) <------ZmHOX2a(1)<---------At4g35610 ================HOX2a_HOX2a               ---------->DOF2--------->ARR14(2)---------->DOF2<---------YAB1   cgaagcgagataggattgagaagaatagaaaactctgaaacagaagaaaggagagtaacggaaatggcagagaaggatcaaagagctcttcttctgcttg  9133100                                                                --------->YAB1                                                            --------->At4g35610                                                          <-----------RAV1(2)                                                          <------NtERF2                                                         <---------At4g35610                                                         <------NtERF2                                                         ------>NtERF2                                                         --------->At4g35610                                                        --------->RAP2.3(2)                                                        --------->DEAR3(1)                                                        ----------->RAV1(1)                                                       --------->ATERF1(1)                                                       <------NtERF2                                                      ------>NtERF2--------->MYB52(1)                                                     <---------DEAR3(1)                                        <------ZmHOX2a(1)--------->LBD16                                      --------->ANAC58<---------ATERF1(1)                                      <---------TOE2(3)--------->RAP2.3(1)                                  --------->YAB1     --------->ANAC46                          ------                               --------->YAB1        --------->ANAC58                         <------                              <---------YAB1         --------->ANAC58                        <-------                              --------->ICU4         --------->DEAR3(1)         --------->MYB52(1)--- ------AtLEC2           --------->ICU4--------->ANAC58<---------RAP2.3(1)     <---------MYB52(2) <--- ----DOF2          <---------ZAT6<---------YAB1    --------->CCA1(2)  ----------->GT1    ----------->GT1   aatggctctctgtgaagtttagagtgaagatgatgatgataaggaagagagagagacgccgcagaagaataacggataaaacaaacggagagggttttta  9133200              <------NtERF2                                                                         -              --------->ATERF1(1)                                                               >>>>>             --------->LBD16                                                                    >>>>>             <---------ATERF1(1)                                                               ------            <---------ANAC58                                                                  -------            <---------ANAC58                                                                  -------            <---------DEAR3(1)                                                                -------            --------->ALFIN1                                                                ------>MYB83           <------NtERF2                                                         <---------YAB1------         --------->ALFIN1                          <---------DAG2              <-----------GT1-------      --------->ALFIN1  <-----------GT1         <---------AHL20(2)         <---------AHL20(2)<------- ---------->DOF2------>NtERF2                   <-----------GT1      <---------ANAC46      --------->MYB52(1) --->YAB1<---------DEAR3(1)                  <---------ICU4         <---------DEAR3(1)    --------->AtMYB61 ---YAB1<------ZmHOX2a(1)                 --------->TOE2(3)        <---------ZAT14        <---------ALFIN1 ----TBP--------->ATERF1(1)               --------->YAB1 <---------At5g28300  <---------YAB1------>MYB46(1) ------>YAB1<---------ANAC46           <----------DOF2  <-----------GT1    --------->AHL20(2)-------- ------YAB1--------->ATERF1(1)   <---------GLK1(1) <----------DOF2 --------->ZAT18       --------->MYB46(3)   taataaaggaggaggcggggactaataaaccctagatttctctttcttaattacttttttaccctcgagcgcggtgttttattactatagaaccacccgc  9133300                                                                       ------>ZmHOX2a(2)                                                                      <------ZmHOX2a(2)     --------->AHL20(2)                                              <---------ARR14(3) -------->AHL20(2)                                                   --------->ARR14(3) >>>>E2Fd                                                            --------->ARR11(3) >>>>E2Fc                                                            --------->AGP1                 < >NtERF2                                                             <---------ARR14(2)             < >GAMYB  --------->MYB46(3)                                          --------->ARR14(2)             < -->ANAC58                                                           <---------AGP1             <---- -->ANAC46          ----------->GT1                                  <---------ARR11(3)      <------- --->LBD16   --------->TOE2(3)                <-----------GT1      ----------->ARR10  <----------DOF2 -->ANAC58   ------->GAMYB        ----------->GT1                ---------->DOF2   ----------->GT1  < --MYB55(2) --------->MYB46(3)   ----------->GT1      --------->MYB46(3)   <---------HSFB2a(2)  <---- ->MYB46(3)-------->P    ---------->DOF2 <---------ICU4    ----------->GT1 --------->HSFB2a(2)-------   caaaaaataaaacaaccacaaactgaaaaaagaagagggaaaatcattttacaacaacaacttgtaacaaagatcttgtggaagggggttttttggtatc  9133400  Previous    Next  AGI:  At4g16141.1    Description:  similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT3G16870.1); contains domain Glucocorticoid receptor-like (DNA-binding domain) (SSF57716) Range:  from: 9131884    to: 9132907    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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