Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------------->AGL15                   <---------------AGL15                  ----------------->AGL2                  <-----------------AGL2                  ----------------->AGL3                  <-----------------AGL3             <---------------AtSPL8                                                              <---          <---------AHL20(2)                           --------->MYB52(2)                     -------  ------->TEIL  <-----------GT1                        ----------->GT1                        ------- -->AHL20(2) --------------->AtSPL8       <---------ARR14(2)                                  <------ >GT1     --------->AHL20(2)              --------->ARR14(2)                    <---------ZAT6<------   tttgcatcttaaaaaattgtactatatttagaaagaattatacaaatactcagagattagttacaaagatggagaatgttgagagttaacttgcaattaa  9120500                                       --------->YAB1                                      <---------YAB1                                     <---------ARR11(3)                                     --------->ARR11(3)                                    --------->YAB1        <---------ATHB12      --------->MYB52(1)              <------ZmHOX2a(2)       --------->ANAC58       ------>MYB46(1)           <---------ARR14(2)       --------->ANAC58       ------>MYB83            --------->LBD16      --------->WOX13(1)     --------->MYB55(1)      <---------ANAC58                       --------- ------WOX13(1)             <---------MYB46(2)       <---------ANAC58      <---------YAB1   <-------- -->AHL20(1)                <---------MYB59          <---------ANAC46 ----------->GT1      --------->YAB1 -->AHL20(2)               --------->ANAC46 <---------ETT(2) <---------ARR11(3)           <---------YAB1 ---AHL20(2)             <-----------GT1    --------->ETT(2) --------->ARR11(3)       --------->YAB1 ---AHL20(1)      <-----------GT1  <---------YAB1   <---------LBD16--------->YAB1    <---------ATHB12   ttgaattgcaatcaactaaattacaatataccaaacgatgatcatatcgacatttgcggataagatcaattgtagttataagtccaaatcatatgatatt  9120600                                                           --------->ATHB51                                                           <---------ICU4                <---------ZAT18                                                           <---------AHL20(2)            --------->ZAT18                                                           --------->AHL20(2)        <---------ATHB12                                                          --------->ICU4         --------------->AGL15                                                       --------->AHL20(2)        <---------------AGL15      <----------DOF2                                  <---------AHL20(2)       ----------------->AGL1 <----------DOF2   ------>ZmHOX2a(1)                <----------DOF2             ----------------->AG >ARR11(3)         <---------HSFB2a(2)        --------------->AtSPL8            <-----------------AGL1 -ARR11(3)<---------YAB1                      <---------------AtSPL8         <----------DOF2        -   ggtctttcctttcttattgtcctagagagtttagataagaaaacatatatagtacttttaattatttctgcaatccattctttcccaatagtgcaatttt  9120700                                                                                    ------>MYB83                                                                                 --------->MYB46(3)                                                                            <---------ANAC55(1)                                                                            --------->ANAC46                                                                            <---------ANAC46                                                                            --------->ANAC55(2)                                                                            <---------ANAC55(2)                                                                            --------->ANAC55(1)                                                                            --------->ANAC58                                                                            <---------bZIP60(1)                                                                            --------->TGA2(1)                                                                            <---------TGA2(1)                                                                            --------->bZIP60(1)                                     --------->ANAC58                       --------->ANAC58        <                                     --------->ANAC46                       <---------ANAC58        -                                     --------->ANAC55(2)                    <---------ANAC58        <                        <---------AHL20(2)                                <-----------GT1        ----           <---------CCA1(2)         --------->ANAC58<----------DOF2    <-----------HVH21     -------         <---------AHL20(2)        <-----------GT1<-----------GT1      --------->ALFIN1------>ZmHOX2a(1)         --------->AHL20(2) <-------TEIL         <-----------GT1    <---------ANAC46------>MYB46(1) - -------->ALFIN1       --------->AHL20(2)  <-------TEIL            <---------LBD16------->GAMYB <----   cagtgtggaatttatatcccatatataaaattcatattcacgaaattcgttttatcttttttcttgaattgcggtgttacgtaaccatccttcgcatcat  9120800              <---------AHL20(2)              --------->AHL20(2)           --------->AHL20(2)           <--------ATHB1           --------->ATHB51           <---------AHL20(2)      <---------YAB1    -------->ATHB1    <---------ICU4   <---------ATHB51   <---------AHL20(2)   --------->AHL20(2)   --------->ICU4 ---------AHL20(2)                                                      --------->MYB52(2) -------->AHL20(2)                          <----------DOF2           <--------P ---------AHL20(1)              ----------->GT1                       <---------MYB52(1) ----->YAB1<---------ICU4     <------ZmHOX2a(1)                      <-------GAMYB -->YAB1--------->YAB1      <---------TOE1(3)                 <---------AHL20(2)              ------- -------->AHL20(1)<-----------GT1      ---------->DOF2       <---------AHL20(2)           ---------->DOF2 -----YAB1--------->ICU4    <---------TOE2(3)                --------->AHL20(2)*TSS <---------YAB1   aataaattattaataatttataacgattttaaggaagaaaaaaaagcttttaaaatcggagaattaatttcggttagttcagatttatgagtgaaagagc  9120900                             --------->ARR11(3)                                                    --                             <---------ARR11(3)          ------>ZmHOX2a(1)                         --  ----------->GT1--------->DAG2 --------->ATHB12<<<<<<<<<TBF1  ---------->ID1                   ----- ---->GT1       ---------->DOF2--------->AHL20(2)  <<<<<<<<<TBF1  <------NtERF2             ---------   aaaattgcaaaaaaaaaaaaaagtcactgaagatttattagactctcttcttcttcttcctccttggcgcaatttcgcaatttcgcaatcgcatcagtca  9121000                                                                                                <----                                                                                               ------                                                                                               <-----                                                                            ------->TEIL       ------      --------->HSFB2a(1) --------->LBD16                                 --------->MYB46(3)   ------     --------->ARR14(2) <---------LBD16                                  --------->ANAC58      ------     <---------ARR14(2)--------->MYB52(1)                            --------->ANAC58          ------ ------->ATHB51 --------->LBD16         <---------WOX13(1)           --------->ANAC58          ------ ------->YAB1  <---------HSFB2a(2)    <------ZmHOX2a(1)              --------->ANAC46          <----- ---->WOX13(1) --------->HSFB2a(2)   <---------YAB1            --------->At4g35610<---------ZAT6<---- >WOX13(1)  ------>ZmHOX2a(1)       <---------TOE2(3)   --------->ALFIN1 --------->ANAC58     <------   attatcgaatcgtcctcccagagattaccggagaaaatgaggattgatgagaacgaaggtgtctctgcttcaagcaagcacctagtcttcgcttactacg  9121100                      <---------ALFIN1                   --------->ANAC58                   --------->ANAC46                   <---------ANAC55(2)                   --------->ANAC55(2)      ----------------------->TaNAC69(2) -------HVH21      --------->ANAC55(1) --->bZIP60(1)     --------->ANAC58 ----bZIP60(1)     --------->O2 --->bZIP60(2)     <---------O2 --->ANAC58        --------->TGA1a --->ANAC58        <---------TGA1a --->ANAC55(2)     <---------bZIP60(1) --->ANAC46        --------->bZIP60(2)                                                           <--- ----ANAC55(2)     --------->bZIP60(1) --------->ARR14(2)                                        <--- -------TGA1    --------->WRKY18(1)    <---------ARR14(2)     <----------DOF2               ------>ZmHOX2a(2) -----STF1     <-----------HVH21 <------NtERF2   ------>ZmHOX2a(1)                          =========   tcactggacatggtttcggtcacgccactcgagtcgtcgaggttccttctccttctctcactctcttttctctctgcatcggtctcatttctgatccatg  9121200                                                                                <------NtERF2                                                                               ------>NtERF2                                                                               <---------ATERF1(1)                                                                               --------->LBD16                                                                              <---------DEAR3(1)                                                                              --------->ALFIN1                                                                             <------NtERF2                                                                             ------>NtERF2                                                                             --------->ATERF1(1)                                                                           <---------DEAR3(1)                                                                     ----------->HVH21                                                                   --------->ANAC55(2)                                                                   ----------->RAV1(2)                                                                   <---------ANAC55(2)                                                                   --------->At4g35610                                                                   <---------At4g35610                                                                <---------MYB52(1)                                                              --------->ANAC46<---------ANAC46    <--            <----------DOF2                           <---------TOE1(3)    <---------RAP2.6(2)   ----          ------>ZmHOX2a(1)       ----------->GT1     <---------TOE2(3)   <---------LBD16        <--- ------ANAC58            --------->ATHB12            <-----------RAV1(2) ------>ZmHOX2a(2) <-------TEIL ------ANAC58       <---------YAB1--------->LBD16----------------------->TaNAC69(2)  --------->ICU4 ================HOX2a_HOX2a    <---------LBD16<---------ANAC46<-----------HVH21--------->ATERF1(1)   cgttttgttttcctctttcattgtgagtgattaatccggataatttgtggtgttttcaggttgtccgtcacctgatcgcggcggggcatgatgttcatgt  9121300          <------NtERF2          ----------->RAV1(2)         ------>NtERF2        <------NtERF2        --------->ANAC58        --------->ANAC58       ------>NtERF2       <---------ZAT18       --------->ABI4(2)      --------->DEAR3(1)      <---------ATERF1(1)      <---------ANAC58      <---------ANAC58     --------->ATERF1(1)   <---------DEAR3(1)   --------->DEAR3(1)  <---------LBD16  --------->DEAR3(2)  --------->At4g35610                                                              ----------->RAV1(2)  <---------At4g35610                                                 <-----------GT1           <----  --------->ATERF1(1)                                               <---------ANAC58        --------- ---------HVH21             --------->At4g35610                     <---------ANAC58       --------->ICU4 ----->bZIP60(1)            <---------At4g35610                ----------->GT1  <<<<<<<<<TBF1 <------ ------bZIP60(1)    ---------->ID1           --------->LBD16  --------->DAG2 <<<<<<<<<TBF1 <---------YAB1   tgtcaccggcgcgcctgattttgtcttcacatctgaaattcagtctccgaggctcaaaattcgaaaggtttcttacttcttcttcttctggcgatgatta  9121400  Previous    Next  AGI:  At4g16130.1    Description:  ARA1 (ARABINOSE KINASE); ATP binding / galactokinase. similar to galactokinase, putative [Arabidopsis thaliana] (TAIR:AT3G42850.1); similar to hypothetical protein OsI_005665 [Oryza sativa (indica cultivar-group)] (GB:EAY84432.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66542.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43967.1); contains InterPro domain Galactokinase, glycosyltransferase (InterPro:IPR012369); contains InterPro domain Ribosomal protein S5 domain 2-type fold (InterPro:IPR014721); contains InterPro domain Mevalonate and galactokinase; (InterPro:IPR006206); contains InterPro domain GHMP kinas Range:  from: 9120879    to: 9127950    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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