Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <---------YAB1                                                                         --------->YAB1               <---------ALFIN1                                       <---------ICU4           --------->ZAT18                                           --------->ICU4 -------->ZAT6--------->ANAC46                             <---------AHL20(2) -----ZmHOX2a(2)                                          --------->AHL20(2)--------->YAB1 ------>ARR11(3)      <---------ANAC58          <----------DOF2     <---------AHL20(2) -------ARR11(3)      <---------ANAC58       <---------ARR11(3)    --------->YAB1             ------- -ID1 ---------->DOF2 <---------ANAC46 <-----------GT1    <---------AHL20(2)<-----------GT1  --------   gatcactacaaagttcaccacattccttgtgttcagtttatttactagacctttgtctaattttatgtataaaaattataacaatgtagaaaactacaac  9105300                                          <---------ICU4                                         --------->ICU4                                         <---------YAB1                                       <---------ICU4                                      --------->ICU4                               <---------MYB52(1)                                              <-----                          --------->ARR14(2)                                               <---------                      <-----------GT1 <---------YAB1                              <---------AHL20(2)            --------->GLK1(2)  <-------GAMYB                                  ----------->GT1--------       <------ZmHOX2a(2)  <---------ARR14(2)      <---------LBD16          <----------DOF2 ---------- ---->RAV1(1)  <---------YAB1 --------->LBD16<---------AHL20(2)         <-----------GT1    ------->TEIL ->REM1(1) <---------GLK1(2)<---------LBD16 <---------YAB1           --------->YAB1        ----------   acaaatgagatcaaattctgatttttaaaatccggttgtgatgattattaatcgtggaaaaaaatcagggattataacttttgttaaattgtgaacgtac  9105400                                  <---------YAB1                   <---------AHL20(2)                                --------->YAB1                    <---------AHL20(2) --TEIL                         <---------ICU4                    <---------AHL20(1) ------AtSPL8                  <---------YAB1                     --------->AHL20(2) ->TOE1(2)                     --------->ICU4                 --------->AHL20(2) ----->AtSPL8             ----------->GT1                     <---------AHL20(2)       ---------->DOF2 ----->AtSPL3       <---------ATHB12  <----------DOF2     ------>ZmHOX2a(2)   --------->YAB1  -------   aatattgaactgaaaatgccaaatgaattggttattattactttgatgaaaatgaattgatcgtttaattttttttatatttataacaaaaatgcgatat  9105500                                                                          <-----------GT1                                                                       <---------AHL20(2)                                                               <---------TOE2(3)                                               --------->AHL20(2)     --------->AHL20(2)                                         <-----------GT1       --------->DAG2                                     <---------AHL20(2)      ---------->DOF2  <----------DOF2     <---------AHL20(2)    <---------ANAC58    <---------AHL20(2)     <---------AHL20(2)         <--- <----------DOF2<-----------GT1  <---------GLK1(2)<---------YAB1----------->GT1               ------- -->CCA1(2)<----------DOF2 <---------ANAC58    <---------AHL20(1)    <---------YAB1   <--------------   gctctttttaattctttatttctatttttgcttcagaattttttttcattttatttttggtcaaaaaggttattaatttccttttcaatttgtacgaatt  9105600       <---------ANAC58                                           --------->YAB1       <---------ANAC46                                           <---------ICU4       <---------ANAC58                                          --------->ICU4           --------->AHL20(2)       <---------bZIP60(2)                          --------->ARR11(3)                    <---------AHL20(2)    ----------->TGA1              --------->YAB1    <-----------ARR10                   <----------DOF2    ----------->HVH21            <---------ATHB12   <---------ARR11(3)              <---------ZAT14 ------AHL20(2)  --------->AHL20(2)              --------->AHL20(2)            --------->WRKY12 >TEIL----------->STF1  <---------YAB1           <---------AHL20(2)            --------->WRKY38(1) -AtSPL3         <---------AHL20(2)         ------------>CBF   --------->YAB1<----------DOF2   taaacggtgacgtttttgtttaaattatcaaacaaatcaaaacaaaatcaataaaatctaatctctcatcatgaggcatctttgactgctctttaattca  9105700                                                                                           <---------                                                                                       <---------MYB111(1)                                                                                     ------>MYB83                                                                                     ------>MYB46(1)                                                                                   <---------MYB55(2)                                                                                   --------->MYB46(3)                                                                                  --------->ANAC58                                                                                  --------->ANAC58                            <---------DAG2               --------->ANAC58         --------->ANAC46                            <----------DOF2              --------->ANAC46       <---------ALFIN1                     <------------CBF               --------->ANAC46          <---------ALFIN1                    <---------ICU4                  --------->ANAC58          --------->ANAC58                    --------->ATHB12                --------->ANAC58   <---------REM1(2)   <---------DAG2              --------->TOE1(3)                  <----------ID1     --------->At4g35610<---------MYB111(2)              --------->TOE2(3)*TSS          >>>>>>>>>TBF1     --------->YAB1 --------->ANAC58  ---------->DOF2  --------->MYB46(3)     >>>>>>>>>TBF1  --------->ANAC58     --------->ANAC46 <-----   ctaaaaaagtctaaaaccctaaccattgccctttttcaaacgaagaagaagaagacgaaacgctaccatcatctacacacacacacccaactactttttt  9105800                                          <---------ANAC46                                         ------>NtERF2                                         <------NtERF2                                        ------>NtERF2                                       <---------DEAR3(1)                                      <---------LBD16                                      --------->LBD16                                      --------->At4g35610                                  --------->ARR14(2)       <---------ANAC46           <---------ARR14(2)            --------->ZAT2     ------>NtERF2               <------ZmHOX2a(1)             ------>MYB46(1)     <---------RAP2.6(3)        ----------->ARR10             <---------ALFIN1    --------->ATERF1(2)        <---------TOE1(2)             ------->GAMYB    --------->DEAR3(1)         --------->SPL7  <---------ARR14(2)--------->DEAR3(1)    <---------ATERF1(2)      --------->LBD16   --------->GLK1(2)<---------ZAT2   --------->ATERF1(1)      --------->ANAC46   --------->ARR14(2)--------->AtMYB61   <---------LBD16       --------->MYB52(1)   <---------GLK1(2)------>MYB83 --------->DEAR3(1)      -------->P<------ZmHOX2a(2)         --------->MYB46(3) -DOF2<------NtERF2 --------->ETT(2)<---------LBD16        --------->ANAC46                <---------ANAC58 ------GT1          <---------ETT(2)------>ZmHOX2a(2)     <-----------GT1                  <---------ANAC58   ccatcgccggcctgtacaaatgtcgactacccgtaggatccgcggcgagaatcggttttataacccacctccgatgagaaaacttcaacaagagcgtgag  9105900                                                       <---------HSFB2a(2)                                                    --------->GLK1(2)                           -----                                                   <---------ARR14(2)                      --------->ANAC58                                                   --------->ARR14(2)                      --------->ANAC46                  <------ZmHOX2a(1)                <---------GLK1(2)                       --------->ANAC58            <---------At4g35610     >>>>>>>>>TBF1----------->ARR10            <------ZmHOX2a(1)------         ---------->DOF2   ---------->DOF2  ---------->DOF2          ---------->DOF2<------ZmHOX2a(1)   aagaagagacttgaagcggaggagatagagaaagagaagaagaaggcaaaggagattctcgatcgaaagattaaagtcgaggagaaggagattaagcaac  9106000                                                            <---------LBD16                                                          --------->DEAR3(1)                                                          --------->AtMYB61                                                          <---------ALFIN1                                                       --------->DEAR3(1)                                                       <---------ALFIN1                                                       --------->AtMYB61                                                      --------->MYB46(3)                                                     xxxxxxxxxxxxxxxx>smallRNA(s)                                                    <---------ALFIN1                                                    --------->DEAR3(1)                                                 <---------ALFIN1                                                 --------->DEAR3(1)                                                 --------->AtMYB61                           <-------                                                --------->MYB46(3)                           --------                                                <xxxxxxxxxxxxxxxxxsmallRNA(se3)             <--------                                           --------->ANAC46--------->MYB52(1)            <---------ARR14(2)                                       --------->GLK1(1) <---------MYB55(2)----------------->AG                                 <-----------HVH21  --------->AtMYB61      ----------------->AGL1             --------->AtMYB61 ------>NtERF2------>ZmHOX2a(1)   <---------ARR14(2)       --------->ARR14(2)          <---------ALFIN1    <---------ANAC58 <xxxxxxxxxxxxxxxxxxsmallRNA(se3)         <---------MYB52(1)      --------->ZAT18         <---------ANAC46--------->ANAC46  --------->ARR14(2)     <---------DEAR3(2)  <------ZmHOX2a(1)           <---------ANAC58<---------ALFIN1--------->LBD16         <---------DEAR3(1) ------>RAV1(2)   <---------MYB52(1)   <---------GLK1(1) --------->MYB46(3)<-----------------AGL2 -->P--------->ALFIN1        ----------------->AGL1--------->MYB46(3)      <-----------------AGL1  --   ctgaggagtgctcgacctccgattgctctgtgccgagtcgggtctcctccaccaccaccaccaccggaactacttcttccaatttgggccggtttctgga  9106100                                   ----------->GT1                                <----------DOF2                           <-------PIF5                           ------->PIF5                        <------------OsbHLH66     --------->ANAC46   <---------ALFIN1   <---------ALFIN1    --------->ZAT18   --------->AtMYB61   <---------ZAT18                                   ------>NtERF2 --HSFB2a(2)          --------->ANAC46                              --------->DEAR3(2) ->HSFB2a(2)          --------->ANAC58                        <---------ANAC58 -LBD16               --------->ANAC58  --------->ICU4        <---------ANAC58 ------->ZAT18     <---------REM1(2)  <---------ICU4        <-----------GT1                        --   ttgcaccactccaattgtttctacgcgcacttgcctttggtaattactccgattttgaagttttacttgaatcgacgacttgggtttgggcagttttaga  9106200  Previous    Next  AGI:  At4g16095.1    Description:  disease resistance protein-related. similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G53350.1); similar to resistance candidate RPP8-like protein [Arabidopsis arenosa] (GB:AAP50228.1); contains domain SSF52047 (SSF52047) Range:  from: 9104558    to: 9105248    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g16100.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G49220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44865.1); contains InterPro domain Protein of unknown function DUF789 (InterPro:IPR008507) Range:  from: 9105731    to: 9108169    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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