Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------P ------YAB1 ------TOE2(3)                             ----------->RAV1(1) ---YAB1 <---------ANAC46         <---------ARR14(2)                                           ------ ----->AGL15                      --------->ARR14(2)                                           <----- ------AGL15                      <---------ARR11(3)                                 --------->DAG2 -------AGL2                <---------WRKY18(1)            <---------------AGL15   ---------->DOF2   tggtagatgggccttggaggtatttgttcttgaccatatattctgcaacaaaattgaattcacatatgaagaaactattgcattgaaaaggcaagaagaa  9091800                                                              <---------ZAT18                                                              --------->ZAT14                                                              --------->ZAT18                              <---------ZAT14                 <---------ZAT14                            --------->ANAC46              --------->DAG2                          --------->ZAT6                 ---------->DOF2                        -----            <------ZmHOX2a(1) --------->ZAT14      <------MYB46(1)                              <----          ------------------------>ANAC81          ----------->GT1                              <----   --------->YAB1        --------->ZAT18           <------MYB83                    <---------AHL20(2) --->ARR11(3)  <---------At4g35610             <-----------RAV1(1)             <---------ZAT6   <---- ----ARR11(3)  --------->At4g35610             <---------MYB46(3)       <----------DOF2   ------>ZmHOX2a(1)   cttattcatgaagaggaagcagagaagaacactaaactcaaaaaaacatttgttggtaaaaaagtgaactaattctttttagtgttttattcctaggctg  9091900                                                                                               <-----                                                                                              -------                                                                                           --------->AHL20(2)                                                                   <-------GAMYB          --------->AHL20(2)                                                    --------->ICU4<---------MYB46(3)      <---------AHL20(2) ---->At4g35610                       <-----------GT1   --------->AHL20(2)     <---------AHL20(2)<--- -----ZAT2                <----------DOF2          <---------TOE2(3)         <----------DOF2  <------ -----ZAT14 <----------DOF2   <---------CCA1(2) <---------YAB1    --------->MYB55(2)    <----------DOF2 -----At4g35610--------->AHL20(2) <----------DOF2 ---------->DOF2<---------AtMYB61  <<<<<<<<<<GT-3b   ctctggttttaagactttttaatataagctttctatcttttaactatgtgattaaagattatatatggtggttgtgtttcttttatttttctttaaatta  9092000                                                                                  <---------ZAT14                                                                                  --------->ZAT14                                                                              --------->ANAC46                                                                              <---------ALFIN1                                                                            <---------ALFIN1                                                                         ----------->HVH21                                                                        <-----------TGA1                                                                       --------->ANAC55(2)                                                                       --------->ANAC58                                                                       --------->ANAC55(1)                                                                       <---------TGA1a                                                                       --------->ANAC46                                                                       ========================bZIP_DOF                                                                       <---------ANAC55(2)                                                                       --------->bZIP60(2)                                                                       --------->ANAC58                                                                       <---------O2                                                      <---------MYB52(1)<-----------HVH21        ----                                                     ============================bZIP_DOF        ----                   <---------TOE2(3)                <---------ANAC58   --------->O2              <--- ----AHL20(2)<---------AHL20(2)                     <---------ANAC46   --------->TGA1a           <--- -->AHL20(2)--------->AHL20(2)                ------>ZmHOX2a(1)   ----------->HVH21 ---------->DOF2 ------TOE2(3)     <---------TOE1(3)  <-----------GT1<----------DOF2  <-----------STF1          <---- ---AHL20(2)<---------AHL20(2)       ---------->ID1 <---------ANAC58 <---------ALFIN1           -----   atgctacatacttataaatttaaggttatgttcaatcttgtcactatcctactggcgttaagtcttcgctcacacgtcacacactgcaaagcactgaaat  9092100                                                                                            ---------                                                                                         --------->ANAC58         ----------->GT1                             --------->AHL20(2)                  --------->ANAC46  --------->TOE2(3)                              --------->AHL20(2)                 ----------->HVH21 ----->AHL20(2)                                 --------->AHL20(2)                 <-----------HVH21 ----->ATHB51           <---------ANAC46        <---------AHL20(2)              ===================== ------AHL20(2)       <---------ANAC46       --------->AHL20(2)                 ----------->RAV1(2) ------ICU4        --------->ALFIN1         --------->AHL20(2)                <---------ALFIN1      < -----AHL20(2)  --------->DAG2              <---------ATHB12   <---------------AtSPL8    --------->ANAC58 ---->ICU4 <---------ZAT6               ------------>CBF   <-----------TBP  ------>ZmHOX2a(1)       <   tatttcttaattagtgaaaaggtttggggtatgttaacaaataccaataaataaataaaacatatatagtacatgttcctccacctgtcacaggcaacat  9092200                                                                              ------>ZmHOX2a(2)        --------->ANAC58                                                     <------ZmHOX2a(2)      ---------->DOF2                                                       <---------AGP1 --------------->AGL15                                                      --------->ARR11(3) <----------DOF2                                                            <---------ARR14(3) <---------------AGL15                                                      <-----------ARR10 -->RAV1(1)---------->DOF2            <<<<<<<<<TBF1                         --------->ARR14(3) ===RAV --------->ANAC58              *TSS                                  <---------ARR11(3) ---------ANAC58            ------>ZmHOX2a(1)                               --------->ARR14(2)   <--- ---------ANAC58        <-----------GT1  <<<<<<<<<TBF1                      <---------ARR14(2)   ----   ttgctttcaaaagcaaagaagcattttttcctccattttcttcttcttctccaaatggattcaacatttagagatgaagatctcgttgaagagagagaag  9092300                                                 --------->ZAT18                                       ----------->GT1                                     --------->YAB1                                    <---------ATHB12                                   ------>MYB83  <---------ZAT18         <---------ALFIN1                                   ------>MYB46(1)   <----------DOF2    <---------At4g35610                             --------->ETT(2)  --------->At4g35610    <-----------GT1                             <---------ETT(2)--------->DAG2      <----------DOF2   --------->ATHB12 ------ARR11(3)           ------->GAMYB<---------YAB1<---------DAG2 <-----------HVH21        -------- ----->ARR11(3)        --------->MYB52(1)   ---------->DOF2 <-----------GT1  ------>ZmHOX2a(1)<------   aactcatggtgtcttacagtgagaataacagtcgacctatcatgaaaaaagctcactttttaaaaccctttgtcacctcctccattgatgggtttcaagg  9092400                                                             --------->ALFIN1                                                          --------->MYB55(2)                               --------->HSFC1(2)         <---------DEAR3(1)                               <---------HSFC1(2)         <---------MYB46(3)   --------->DAG2                            ---------->DOF2             <---------LBD16       ---------->DOF2                     ------>ZmHOX2a(1)                 <---------ANAC58  ------>MYB46(1)                     --------->LBD16                   <---------ANAC58  ------>MYB83                   ----------->RAV1(2)              <----------DOF2    <---------MYB59              < ------------->WRI1<---------LBD16     <----------DOF2 <---------ANAC46<---------MYB46(2)           - ---TOE2(3)    ------>ZmHOX2a(1)  <-------TEIL  <-----------GT1  <---------MYB46(3)          --------   tatgcttcgtccatctccttctcctgagttaaaagcttcgtctttaagtgtttcctttcgtgggtggaggttaccaaacaaaaagtttcagttttgggtt  9092500                                                                                     --------->GLK1(2)                                   --------->GLK1(2)                                 --------->ARR14(2)                                   <---------ARR14(2)    ---------->DOF2             <---------ARR14(2)                                   --------->ARR11(3)   --------->YAB1     <---------ARR14(2)       <--------P       ------>MYB83 --------->TOE1(2) <---------ATHB12    --------->GLK1(2) ---------AHL20(2)      ------>MYB46(1)              --------->WOX13(1)    --------->ARR14(2) -------->AHL20(2)     <---------ALFIN1           --------->ANAC58        <---------GLK1(2)     <---- --->GT1   <----------DOF2  ----------->GT1       --------->ANAC58     --------->HSFB2a(2)  <--------   aaaaaaatggtagctttacacaaacccacttggttaaaatctgggatttttgaagcaatcaaagcatcgacttacagaatccacaaaaatccgtctttga  9092600                                                                --------->TOE2(3)                                                                --------->TOE1(3)                                                                --------->YAB1                                                              -------->P                                                           <---------At4g35610                                                           --------->At4g35610                                                       --------->ALFIN1                                                     <---------ANAC46                                                     <---------ANAC58                     <----------DOF2 -----GLK1(2)            ------>ZmHOX2a(1)           <---------ANAC58        <------ZmHOX2a(1)      < --DOF2                <---------ANAC46          <---------MYB52(1)        <---------TOE2(3)    <----   ttctctctctcgctcagaattggtgtcctgaaactaatacatttgtgttcccttggggtgaagctaccataactcttgaggatgtgaatgtgcttctggg  9092700  Previous    Next  AGI:  At4g16045.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G43560.1); similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G43560.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO71320.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974) Range:  from: 9089918    to: 9091872    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g16050.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G51538.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68396.1); contains InterPro domain Protein of unknown function DUF1723 (InterPro:IPR013541) Range:  from: 9092238    to: 9094369    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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