Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                              <------                                                                                              <------                                                                   ---------->DOF2           --------                                                          <----------DOF2          --------->ICU4                                                      --------->GLK1(1)            <---------YAB1                                                     <---------ARR11(3)         <------ZmHOX2a(2)                                                     --------->ARR11(3)        <---------ARR11(3)        ---------->DOF2   <----------ID1            <---------HSFB2a(1)        --------->ARR11(3) --AHL20(2)      <---------AHL20(2)                 --------->HSFB2a(1)<---------ARR11(3) --------->YAB1 ->AHL20(2)      --------->AHL20(2)  <------ZmHOX2a(1)<---------GLK1(1)--------->ARR11(3)<---------YAB1   tatgtctagagaaagaaatttaaatttgacgacgaaataggattacaaaatggaagatttctttttcgaaaaagatttgtagatcatgtttatcatataa  9089500                           --------->HSFB2a(2)                       <----------DOF2                      ------>ZmHOX2a(2)                    <---------ARR11(3)                                        <---------MYB52(1)                    --------->AGP1                                           --------->TOE2(3)   <---     ----------->GT1--------->ARR11(3)                                       <---------------AGL15    <---------TOE2(3)<------ZmHOX2a(2)                             <---------DAG2                ---- --->YAB1           <---------AGP1                                 <----------DOF2              <---- ---AHL20(2)  <---------AHL20(2)    <---------WOX13(1)   <---------YAB1      --------------->AGL15  < ---YAB1  <---------YAB1   <---------HSFB2a(2) <-----------GT1  <-----------GT1             <-------- ->AHL20(2)  --------->AHL20(2)   --------->ATHB12    <---------MYB52(1)<----------DOF2<-----------GT1   tagtataatgttatatttaatagatctttctgtaactgattgaagaatattactctgttatgctagtaacttttctttcccttaatttgttacttcgtat  9089600                                <-----------GT1                            <---------ARR11(3)                            --------->ARR11(3)                           <---------CCA1(2)                         <---------CCA1(2)                    --------->ZAT14 ------ARR11(3)      <---------ANAC46                         <---------ZAT14 ----->ARR11(3)  --------->HSFC1(2)                <----------DOF2 -----CCA1(2)    <---------HSFC1(2)                <---------DAG2        <---------ANAC46 ----------DOF2--------->ARR11(3)               <---------TOE1(3)    <----------DOF2 -ANAC46       <---------ARR11(3) --------->ZAT6<---------TOE2(3)  <---------At4g35610<----------DOF2   atcttttttttttataagatacttcgtatatatcttacactactgcgattaagctttttctctctgctctgctcttcgtgtaagtgttcttttctaaatt  9089700                                       <---------ANAC46               <---------ZAT6          --------->bZIP60(1)                                 <---------YAB1              <---------TOE1(3)  --------->DAG2      <---------ZAT6                        <---------TOE1(3)              <---------TOE2(3)<--------P    <---------ARR11(3)                            <---------TOE2(3)         <----------DOF2       ==================MYC_MYB                                <---------YAB1         ========================================bZIP_DOF     --------->AHL20(2)     --------->AHL20(1)    <---------WOX13(1)      <---------ZAT6   --------->ARR11(3)<---------AHL20(2)   --------->YAB1   <------------CBF     <---------ZAT14<---------bZIP60(1)<---------YAB1            --------->AHL20(2)  --------->ATHB12      --------->ZAT14<---------TGA1a  <-----------GT1          --------->YAB1<-----   ttaaagattgacttttagggttacagtttactggtaaggtgatgtgagatttttggtgttacgatttaatctataggtttgtctaataatattatggttt  9089800                                                                 ------>ZmHOX2a(2)                                                                --------->ARR14(1)                                                                <------ZmHOX2a(2)                                                                --------->CCA1(2)                                                               <---------ARR11(3)              <-----                                                               <---------ARR14(2)             -------                                                               --------->ARR14(2)            <-------                                                               --------->ARR11(3)            <-------                                                             ----------->ARR10              <--------                                                          ------>ZmHOX2a(1)           <---------AHL20(2)      <----------DOF2                                     =============HOX2a_HOX2a    --------->AHL20(2)    <---------YAB1                                        ==============HOX2a_HOX2a <----------DOF2   --------->ARR11(3)                                    --------->TOE2(3)          --------->TOE2(3)   <---------ARR11(3)                                    --------->TOE1(3)         <---------ICU4 <---------AHL20(2)                         --------->AHL20(2) --------->AGP1<---------ANAC58<------- ------TBP   --------->YAB1 <-----------HVH21          --------->ICU4        <---------ANAC58--------   tatattatctttgtttgataatttgacctgtgtcatgtctatacgattatttgtgtcatccttaagatccgatatacttgcttaatctttaatttccgta  9089900                                -------->HAHB4                                --------->YAB1                                <---------ICU4     <------ZmHOX2a(1)       --------->YAB1                                       <--------P     ==========================HOX2a_HOX2a  --------->LBD16               <--------ATHB1 ----MYB52(1)           <------ZmHOX2a(2)  <---------HSFB2a(2)            --------->ATHB12 -->LBD16              --------->ARR11(3)  --------->HSFB2a(2)           --------->ICU4      >>>>>>>> --ANAC58              <---------ARR11(3) <---------LBD16                <---------YAB1     --------- --ANAC46          <---------TOE1(1) ------->TEIL             --------->MYB52(1) <-------GAMYB<------ -LBD16      --------->CCA1(2) <---------ATHB51             <---------MYB52(2)  <---------MYB46(3) --ANAC58   <---------ARR11(3) <---------ATHB12         --------->DOF5.7(2)    <---------TOE2(3)   <- ->ANAC55(2)--------->ARR11(3) --------->ICU4          <----------DOF2  <---------WOX13(1) <---------YAB1   gtttgaaggagatagatatgtccgagatcactaataatgaaacttctggagaagggactttaactaacaacgtgaatgattgtggttagtattttgattg  9090000                                                                    --------->ANAC55(2)                                                                  <---------AHL20(2)                                                                  <-----------GT1                                                             --------->AHL20(2)                                                             <---------AHL20(2)                  ----                                                         <---------ANAC46                        <--- >ARR2                            ------->TEIL           ----------->GT1    ----------->GT1  <------ZmHOX2a(2) >ATHB12  <---------ATHB12     <---------REM1(1)    <---------ANAC58<---------ANAC55(2)      ======== ---WOX13(1)                  <---------------AtSPL3<---------ANAC46<---------ANAC58       <------ZmHOX2a(1) --------AHL20(2)             --------------->AtSPL3<---------ANAC58<---------ANAC58   --------->TOE1(2)   ttttattctcaaatgactctagtattttagttgatgtaccacaagtatgtgttttcgtggtgtttaaattacttgatatcgttacattacataggatcaa  9090100                                                                 --------->LBD16             <------NtERF2                                                                <---------ANAC55(2)         ------>NtERF2                                                                --------->ANAC55(2)       --------->ATERF1(1)                                                               ------>ZmHOX2a(2)         <------NtERF2                                                              <------ZmHOX2a(2)      <------MYB83  -- ------>ZmHOX2a(1)                    --------->AHL20(2)     --------->ARR14(2)      <------MYB46(1) ----->ARR14(2)                    --------->YAB1    --------->WOX13(1)             <---------AtMYB61 ------ARR14(2)                   <-------TEIL     <---------ATHB12     --------->ICU4 <---------RAP2.6(2) =======HOX2a_HOX2a     <---------AtLEC2     <-----------GT1 <---------ARR14(2) <---------TOE2(3) ---   atccttctgaactatatgggacatttacatggaagattcataaattttcacaaatcaatgagcgatccgtagcaatgtttttgagattggtggccaccga  9090200                      --------->YAB1                     <---------YAB1                     --------->ICU4                                                           <------                   --------->YAB1                                       --------->YAB1        <------MYB83                --------->YAB1                                         <---------YAB1         -------       --------->bZIP60(1)                                            --------->AHL20(2)      <------MYB46(1)       <---------TGA2(1)                                              <---------AHL20(2)  --------->ATHB12       --------->TGA2(1) ---------->DOF2     <---------AHL20(1)      --------->YAB1       --------->YAB1       <---------bZIP60(1)--------->DAG2     --------->ARR11(3)     <---------YAB1       <---------YAB1 ------->At5g28300<---------YAB1             <---------ARR11(3) <----------DOF2 --------->TOE1(2) -------->GT1  <---------YAB1       <----------DOF2             <---------DAG2  --------->TOE2(2)   tggtaaatgacatcattttcataataataaagttgaaactttctgaatatatatgttttttgtttgctttattataatcttacctatgactatgataggt  9090300                                                                                            ---------                                                                                  --------->LBD16                        <---------TOE2(3)                          --------->ANAC46<---------ZAT2                     <--------P                                    --------->ANAC58--------->ZAT2----              --------->ANAC46             <----------DOF2         --------->ANAC58<---------At4g35610       <---------AHL20(2)          ------->GAMYB                --------->TOE1(2)--------->HSFB2a(2) ---ANAC55(2) --------->O2        <------------AtMYB77 --------->ALFIN1          <-----------RAV1(2) -->ANAC55(2) <---------O2        <<<<<<<<<TAC1        <-----------RAV1(1)       <---------HSFB2a(2)   atttgttaatttatccacgaggggttgatgtttccaactgtctctctttgtttctctgtgttgcaaactacgaaaaacttcttccaggtgagtattgtaa  9090400  Previous    Next  AGI:  At4g16045.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G43560.1); similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G43560.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO71320.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974) Range:  from: 9089918    to: 9091872    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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