Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------ARR14(2)                                                --------->ARR14(3)                                                <---------ARR14(3)                                                <---------GLK1(2)              <------MYB46(1)                   --------->ARR11(3)            <---------MYB52(1)                  --------->ARR14(2)           <-------GAMYB                    ---------->DOF2          --------->MYB55(2)             --------->ANAC58          --------->MYB52(2)             --------->ANAC46          <---------DEAR3(2)           <---------ALFIN1          <---------MYB46(3)      --------->ANAC46          <-----------RAV1(1)     --------->ANAC58      <---------TGA1a          <----------CDC5  <---------ARR11(3)      --------->ANAC58         <---------MYB52(1)   ------>ZmHOX2a(1)      ====================================MYC_MYB  --------->TOE2(3)      =================================================bZIP_DOF      --------->TGA1a--------->ATHB12----------->RAV1(1)      --------->ANAC58        --------->At4g35610<------ZmHOX2a(2)      =============MYC_MYB  ===============================HOX2a_HOX2a             --------->ARR14(2)      --------->ANAC46 <---------WOX13(1)--------->ANAC58                  <---------ZAT18     ------->TEIL   <---------YAB1--------->ANAC58------>ZmHOX2a(2)        --------->ZAT18      <---- ---->WOX13(1)<------MYB83  ------>ZmHOX2a(2) ----------->ARR10     --------->GLK1(2)          <-----   atcaatgcacgtctgttggtatgtgattgatccgctaagccacacacaaagatcctcaacgaagtctgacaatctagtgaacaaaaatcccctaaattta  9059600                                                                                 --------->At4g35610                                                                                 <---------At4g35610                                                                           --------->RAP2.6(3)                                                                          <---------ARR14(2)                                                                          --------->MYB52(1)                    --------->WOX13(1)                                   <---------GLK1(1)               <------ZmHOX2a(2)                                   <---------ANAC58 <---------TOE1(2)<---------YAB1                                   <---------ANAC46                <- -------GT1   <---------ARR11(3)                                   <---------ANAC58 --------->At4g35610 ------GT1    --------->ARR11(3)     --------->At4g35610   <----------DOF2--------->ARR14(2) <-------   tccctcgtttttcgaagatcatcaatcgcatcatccataagctctctacaagtattaagcgcttctcttgtgtgcatatcggcatctgctctactcttta  9059700                                                                                     --------->bZIP60(1)                                                                                   <---------ATERF1(1)                                                                                   ------>NtERF2                                                                                  --------->DEAR3(1)                                                                                  <---------ETT(2)                                                                                  ----------->HVH21                                                                                 --------->ATERF1(1)                                                                                <---------ATERF1(1)                                                                        <---------LBD16 ------------>AtMYB77                                                                        --------->HSFB2a(2)                                                           ------>ZmHOX2a(2)    --------->LBD16                                                          <------ZmHOX2a(2)    --------->TOE1(2)                                                         <---------AGP1<---------LBD16--------->AtMYB61                                                         --------->AGP1<---------ANAC46----------->HVH21                                                         --------->ARR14(3)   ------>ZmHOX2a(2)                                                         <-----------ARR10    <---------LBD16                                                         <---------ARR11(3)   --------->ATERF1(1)                                                         --------->ARR14(2)  <------ZmHOX2a(2)                                                         <---------ARR14(3) <---------ARR14(2)  <----    <---------ICU4                                       <---------ARR14(2) --------->ARR14(2)  <----    --------->YAB1                                       --------->ARR11(3)<---------GLK1(1)    <----   <---------ATHB12                                     <---------CCA1(2)--------->LBD16--------->MYB52(1) --------->WOX13(1)                                     <---------ARR14(1) --------->GLK1(1)<-------GAMYB -----ZmHOX2a(2)                             ----------->GT1          <---------LBD16<---------bZIP60(1) ---DOF2                            <---------YAB1---------->DOF2   <---------GLK1(1)--------->bZIP60(2)   gatcaatcatccctctgtcgattccacttcgaatcgagatgatagcaaggtcaaaagcagatcttattagatttcggggatccggcgacctcacggttgc  9059800                                                                                    --------->At5g28300                                                                             <----------DOF2                                                                            <---------ANAC58         <---------ZAT18                  --------->YAB1               --------->ZAT2   ------->TEIL     --------->ALFIN1                   --------->AHL20(2)        --------->YAB1 <---------At5g28300   <---------O2                     <-------TEIL          <----------DOF2   <---------ANAC58 -----ANAC46                  <---------MYB46(3)   --------->DEAR3(1)  <---------At4g35610 -----ANAC58                 --------->ALFIN1<---------ICU4      <---------YAB1  <---------LBD16 -----ANAC58      <---------ANAC46<------NtERF2  <---------At5g28300   --------->At4g35610   gagactcgtggtgcaatcttgtttgtaatcggtggaggcacatataatactcaccgtcgtctttgttatcatcagcttgctttcacggtgaacctcttcc  9059900                                                                 <---------ATERF1(1)                                                                <---------MYB52(1)                                                                ----------->TGA1                                                                ----------->HVH21                                                               <-----------HVH21                                                              <---------ANAC58                                                              <---------O2                                                              <---------ANAC58                                                              --------->O2              --------->At4g35610                      <---------YAB1              <---------At4g35610                    --------->YAB1              <-------GAMYB       --------->ANAC46   <---------ICU4 ------>NtERF2             <-----------RAV1(1) --------->ZAT14    --------->ICU4 <---------ANAC46             <---------MYB46(3)  <---------ZAT14  <---------------AGL15              <---------AHL20(2)             --------->ALFIN1    <---------REM1(2)--------------->AGL15     --------->ANAC58        <---------LBD16  --------->WRKY12        ----------------->AGL1     --------->ANAC46    <----    ------>ZmHOX2a(1)   <---------MYB52(1)       ----------------->AGL3     --------->ANAC58    <---- <-----------GT1      --------->ATHB12     <---------YAB1    <-----------------------TaNAC69(2) <----   attttcctactcgggctgttgccatcgttggcctctacacaaatgaccattgccataatgagagccgtgacgcctaacaagacatatttattcatcttgc  9060000                                      <---------LBD16                                      <---------HSFB2a(2)   <--------ATHB1                     --------->HSFB2a(2)                             <---------MYB46(3)   <---------ICU4                    <---------LBD16                         --------->DAG2 -----ANAC58                        <---------LBD16                         ---------->DOF2     ----- -----ANAC46            <----------DOF2--------->LBD16               <------------CBF <------MYB46(1) -----ANAC58        <---------GLK1(2)<---------ANAC46             ------------>CBF    <------MYB83   ttgaataattccatccattccacattctttttttttttttcggggaatgttttgggattttttagaatatcaattgctaaaagtaagttggtttcgaagt  9060100                                           <---------MYB52(1)                                          <-------GAMYB                                       <---------At5g28300                                 --------->AHL20(2)                                      <-----------GT1                                      <---------AHL20(2)                                <------MYB46(1)                                        --------->AHL20(2)                                <------MYB83                    --------->ICU4        <---------ARR11(3)                               --------->MYB59                --------->ATHB12        <---------AHL20(1) ------->CBF             ---------->DOF2 ----------->GT1     <---------ATHB12         --------->AHL20(1)   caatacttatatgtggaagaagggagggaaagttaggtttttaccgttaaaaaacttgaggcagtcattagtttctcaaaaatcccaaaatatttaaaat  9060200                          --------->LBD16                          <---------LBD16                         <---------ANAC58                         <-----------HVH21                         <---------ANAC46                        <------MYB46(1)                         <---------ANAC58                        <------MYB83                     <---------ANAC58                         <------------CBF                     <---------ANAC58       <-----------TBP  <---------MYB46(3)              <-----------GT1         <---------GLK1(2)      --------->ATHB12          <---------ARR14(2)      <-------TEIL      <------------CBF      <------------CBF          --------->ARR14(2)   --------->GLK1(1)<-----------GT1<---------WOX13(1)              <-----  >>>>>>>>>>>>>>>>>LFY  <---------LBD16   <----------DOF2 <---------At4g35610                  ------   ttgtttccagtggattttgctatacttgcggggaaattcatattctttttataccattggaggtgattggtcacaaaattgaatgtataaaactcatctt  9060300                                                                          ----------->GT1                                                                   <---------------AGL15            -                                                                   ==================================                                     <----------DOF2             --------->YAB1                     -                                     <---------DAG2             <----------ID1                      -       <---------YAB1           <---------PCF2                --------->YAB1                      --- <---------AHL20(2)             --------->TCP20              <---------AHL20(2)                   --- --------->AHL20(2)             --------->TCP15(1)         --------->CCA1(2)                      <-- -----DOF2                     ----------->HVH21          <---------ARR11(3)                   ------ --->TOE2(3)           <-----------HVH21 <-----------GT1  --------->ARR11(3)                   <-----   taaaaaattgtgtttgctaattctctatcacatgggacccttttttctctgtaaacttaagatataatgacaaaaatggaaacattgagagaacaggggc  9060400                                                                  --------->AHL20(1)                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)                                                              --------->AHL20(2)                                                          --------->AHL20(2) -------->ANAC46                                         --------->AHL20(2)                      ---- ====================================================================MADS_MADS                   <--- -------->ANAC58                                         <---------AHL20(2)                      ---- -------->ANAC58                                       ------>MYB83         <-------MYC3     -------- ------>ANAC58                                         ------>MYB46(1)      ------->MYC2     <------- ------>ANAC58       <------ZmHOX2a(1)               --------------->AGL15  ------->MYC3     <------- -------ALFIN1    --------->CCA1(2)                  <---------MYB59        <-------MYC2    <-------- --->ZAT18      --------->CCA1(2)            <-----------GT1 --------->AHL20(2)     <----------DOF2 ----ZAT18 ---------->DOF2   ----------->RAV1(1)    ----------------->AGL3  <-------MYC4    ---------   acacacaaaaaaaaaaagagataggattgaacaacattttttaaaattaaccataccaaataaataaaaaaattagcacatgtcttcttttctaatcatt  9060500  Previous    Next  AGI:  At4g15980.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G49180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17502.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 9057478    to: 9059995    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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