Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                               <-------TEIL<---------ZAT6                         <--    <---------ARR11(3)                        --------->GLK1(2)                                ------    --------->ARR11(3)                        --------->CCA1(2)          <----------DOF2      ------- -------HSFB2a(2)                ----------->GT1----------->GT1 --------->At4g35610           <------ ------>HSFB2a(2)    ----------->GT1         --------->ARR11(1) <---------At4g35610          <-------   cttgaagatgtcttatgggaaacatgttaaatggatagtaaatgagagattcgaaaatatagtgtgagcttccttctttggtttatgcattctccatgtg  9023300 <------NtERF2 ---------ARF1                     --------->ARR14(2) -------ANAC46             <-----------RAV1(1)                                                     <- --->ALFIN1             <----------DOF2                                                --------->AHL20(1) >MYC3               <-----------GT1                                                   <---------ARR11(3) -MYC3          --------->ARR11(3) <---------ARR14(2)                                  <---------AHL20(1) ----RAV1(1)    <---------ARR11(3)<---------CCA1(2)--------->ANAC46            --------->At4g35610 --   gggggcaaggtttttgaagatttatacttttgtggcaaatctcttgtttgaatactccatgggagtctctcatcaaaactatgctgcaaaatatttgaaa  9023400                                                        <---------ANAC46                                                        <---------AtLEC2                                                        <---------ANAC58                                                  <---------AHL20(2)                                                  --------->AHL20(1)                                                  <---------YAB1                                                 --------->AHL20(2)                         ----------->GT1         --------->YAB1                          ------->TEIL               <----------DOF2                  <---------ATHB12                <------MYB46(1) --------AHL20(2)        <---------ZAT6    --------->TOE2(3)                    <------MYB83       -- ------->AHL20(2)    ---------->DOF2<---------AHL20(2)  <---------ANAC58   --------->ATHB12     <----   atttataaatctattgtctttgagaaagtgttacaaaatttatgacctcaataatattgcatgaaaactttcatacatcatttggtatatgtatgtttaa  9023500                                                                         --------->TOE2(3)                                                                         --------->YAB1                                                                         <---------------AGL15                                                      --------->WOX13(1) --------------->AGL15                --------->YAB1           --------->TOE2(3)              ----------------->AGL3           --------->At5g28300         <---------ARR11(3)               =============================          --------->TOE2(3)----------->GT1      --------->ANAC55(2)     ----------------->AG          ----------->GT1---------->DOF2 --------->YAB1                 ----------------->AGL1  ----------->GT1  ---------->DOF2     --------->ARR11(3)               ----------------->AGL2 --------->DAG2 --------->AHL20(2)     --------->AHL20(1)         <---------ICU4  --------->AHL20(2) -------->DOF2 <---------YAB1          <---------AHL20(1)     <-----------GT1   <---------TOE2(3) -----TOE2(3)  --------->ICU4--------->AHL20(2) <---------ANAC55(2)   <-----------GT1         <------   gaaaaggtaaaaccgtaattataaagagaaagaaaatacaatatcttaatacatatcaatctaattactcattaaccatattaagaaaatatgtgtcttt  9023600                                                                                      --------->ANAC46                --------->DAG2 <---------ARR14(2)                                   <---------RAP2.3(1)               ---------->DOF2 --------->ARR14(2)  <------------CBF                <---------RAP2.3(3)            --------->YAB1     <---------ARR11(3)--------->AHL20(1)              <-----------GT1      <----------DOF2          --------->ARR11(3)--------->AHL20(2)     ---------->DOF2------>NtERF2   ---------->ID1       ---------->DOF2          <---------AHL20(2)<----------DOF2 <---------DEAR3(1)  <-----------GT1  --------->TOE1(3)     ----------->GT1           <---------------AGL15 ----------->RAV1(1) ==================================================================================MADS_MADS     ---- ----DOF2  >>>>>>>>>MYB98    ----------->ARR10  --------->AHL20(2) --------------->AGL15<------NtERF2   attttttccttttaacataaagcttaaaaagaagatttgtagccagaaaaattaattgtgttcatttcccttttaaaagaatttttcggcgcaacaaaat  9023700                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              ------>NtERF2                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                            <------NtERF2                                                                                            <--------                                                                                            ---------                                                                                           <---------ATERF1(1)                                                                                           <---------RAP2.3(1)                                                                                           ------>NtERF2                                                                                           <---------DEAR3(2)                                                                                          <---------ATERF1(2)                                                                                          <---------RAP2.6(2)                                   <-----------GT1                                        <---------RAP2.3(2)                               <---------YAB1<-----------GT1                              --------->ATERF1(2)          <---------AHL20(2)  --------->AHL20(2) <---------ZAT14                          <---------RAP2.3(3)          ----------->TBP     <---------AHL20(2) --------->ZAT14                         <---------LBD16          --------->AHL20(2)<---------YAB1 *TSS--------->ANAC46        --------->TOE2(3) --------->RAP2.6(3)   <------------CBF      <---------YAB1 <----------DOF2                --------->TOE1(3)------>NtERF2 ------->GT1             --------->ICU4 <---------DAG2    <----------DOF2  ---------->DOF2<---------DEAR3(1)   cgtgaaattgatataaataaactcgagattattaatataaccctttttcacttcacttctctttctctctaaaccctaaaagaagaacgatgccggctcc  9023800 ----->NtERF2 ------->DEAR3(1) --------->HVH21 -->NtERF2 ---->DEAR3(1) ------>HVH21 --->DEAR3(2) --->ATERF1(1) -NtERF2 ---ATERF1(1) ->ARR14(2) --ARR14(2) >ATERF1(1)                          --------->DAG2 -ZAT2  <------ZmHOX2a(2)           ---------->DOF2                <---------ANAC55(2) >ZAT2--------->GLK1(1)    <-----------HVH21                    <------ZmHOX2a(2)   gacgacggagatcgaacccatcgaagcacagtcactgaaaaagctcagtctcaaatccctcaaacgatcacttgaactcttctctcccgtccatggccaa  9023900              --------->LBD16             --------->ANAC58             --------->ANAC46             <---------HSFB2a(2)             --------->ANAC58                           --------->YAB1            <---------LBD16                           --------->ARR14(2)        ------>ZmHOX2a(1)                             <---------ARR14(2)        ==================================HOX2a_HOX2a ------->TEIL        ----------->HVH21             --------->LBD16 <-----------ARR10      ----------->RAV1(2)          <------ZmHOX2a(2)  <---------ARR11(1)                    <--------     =====================================HOX2a_HOX2a<---------ARR14(1)                  ---------->ID1     ------>ZmHOX2a(1)            --------->ARR14(2) <---------CCA1(2)            --------->ATHB12    <---------ALFIN1 <---------MYB52(1)     <-----------GT1                      <---------YAB1   ttccctcctcctgacccggaagcgttagtcttcttcgatccccaattttcgattcgaatcttcattttcttcactaagtttttatgatttcttcgttttt  9024000                              --------->ANAC46                       <-------TEIL                     <---------ARR14(2)                                                      <-------                     --------->ARR14(2)                                      <---------AHL20(2)                     <---------GLK1(2)                                      --------->AHL20(1)                   ----------->ARR10                                        <---------AHL20(1)                --------->ANAC58      ----------->GT1                       <---------AHL20(2)                --------->ANAC58     --------->DAG2                <----------DOF2   <---------MYB52(1) -MYB52(1)   <---------At4g35610     <---------TOE2(3)      -------->P      --------->AHL20(2)   tttttttttttttgcagcaagcagattcgtctcagccataaggtaaaacattgagtctctcttaccagtctttagaaatttatttcagttattcgctttt  9024100                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                            <--------                                                                                        -------------                                                                                        -------------                                                                                        <------------                                                            --------->ATHB51            -------------                                                            <---------ICU4              -------------                                                           --------->ICU4               <------------                                                           <---------ATHB51           <-----------GT1                                                           <---------YAB1    <---------TOE1(3)     --                                                <---------TOE1(3)      <---------ARR11(3)------------       --------->ATHB12                         <---------TOE2(3)      --------->ARR11(3)<-----------      <---------YAB1   ---------->DOF2<---------TOE2(3)  --------->TOE2(3)  <-----------RAV1(2) ----- ---DOF2 <---------WOX13(1)        <----------DOF2    <-----------GT1 <---------CCA1(2) =============   aatgtctattgattggattttggtttaaagcttcgaactttaggtttattcaggtttttccataattgttctaaatcttcaggttttgttaccaataata  9024200  Previous    Next  AGI:  At4g15900.1    Description:  PRL1 (PLEIOTROPIC REGULATORY LOCUS 1); nucleotide binding. Identical to PP1/PP2A phosphatases pleiotropic regulator PRL1 (PRL1) [Arabidopsis Thaliana] (GB:Q42384); similar to PP1/PP2A phosphatases pleiotropic regulator 2 (PRL2) [Arabidopsis thaliana] (TAIR:AT3G16650.1); similar to hypothetical protein OsI_011169 [Oryza sativa (indica cultivar-group)] (GB:EAY89936.1); similar to PP1/PP2A phosphatases pleiotropic regulator PRL1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95840.1); similar to unknown [Populus trichocarpa] (GB:ABK95731.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro d Range:  from: 9023743    to: 9027681    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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