Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <-----------RAV1(1)                                                                ----------->GT1                    --------->YAB1                          --------->AHL20(2)                 --------->WOX13(1)                         <---------AHL20(2)                 --------->YAB1                             --------->AHL20(1)       --------->TOE2(3)                                    <---------AHL20(1)       --------->TOE1(3)                                   --------->AHL20(2)<---------AtMYB61       --------->YAB1       <----------DOF2              <---------------AGL15     <---------ANAC46 ------->DOF2   --------->AHL20(2)                       --------------->AGL15  <---------ANAC46   --   caaagaaaaccataaccattaatcaaaattcttttttttttgttaacaagtactagttgcattaaattgtaaacatatggtggtgttgtatatgtttgat  9012300                                               <---------ICU4                                     <---------At4g35610                                     --------->At4g35610                                     ----------->RAV1(2)      ----------->HVH21                      <---------MYB46(3)  ----------->RAV1(1)<---------WOX13(1)             ---------                    <---------ANAC58 =================RAV <---------YAB1           <---------YAB1    ------->TEIL    <---------ANAC58------->TEIL     <----------DOF2           <---------ANAC58 -------->DOF2 ---------->DOF2    <---------ZAT18 <-----------GT1              <---------ANAC58   acaaagaacctatataacaaaggcttgttgggatagtgcatctgccacattatttcttttccgattgacatgtccatagatgagtgtgatagcttcaaca  9012400                                                                     <---------AHL20(2)                                                                 --------->AHL20(2)                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                                            <---------AHL20(2)                                                         <---------AHL20(2)                                                         --------->AHL20(2)      <------ZmHOX2a(1)                                                    --------->AHL20(1)           ====================                                                    <---------AHL20(1)          ----------->GT1                                                 <---------AHL20(2) --------------->AGL15          <-                                                 --------->AHL20(2) <---------AHL20(2)           <---                ---------->DOF2              --------->AHL20(2)  <---------AHL20(2)            ------     <---------ANAC46        <---------------AtSPL8<---------AHL20(2)--------->AHL20(2)   <---------AHL20(2)   <---------ARR11(3)  <---------ZAT14       <---------AHL20(2) <---------AHL20(2)   --------->GLK1(2) >REM1(1)      --------->AtMYB61       --------->YAB1<---------AHL20(2)   --------->MYB59 --------->AHL20(2)   tccaatatcgtataccaccaaagactgaagagtagtaccaagaatatttatatatatatttatttatttatttattttggtaaggagaatatttatatca  9012500             <---------YAB1                                                         <---------AHL20(2)             <---------AHL20(2)                                    <---------ANAC55(2)     <---------      --------->AtMYB61                         --------->AHL20(2) <---------ANAC46--------->AHL20(2) ------>ZmHOX2a(2)               <---------AHL20(2)                ----------->GT1 <---------AHL20(1) =======HOX2a_HOX2a   ----------->GT1        --------->YAB1       --------->MYB59  <---------AHL20(2) --------ARR11(3)     <---------YAB1        <---------YAB1        <-----------------------TaNAC69(2) ------YAB1--------->TOE2(3)    --------->AHL20(2)   <---------AHL20(2)       ------------>CBF      < --->YAB1  <----------DOF2      <---------AHL20(2)  --------->AHL20(2)       --------->TOE2(3)      <   tgatcccaccatactttaattgttatgaaaaaattttaatttgattttcataaattttatagtttagttaagtataaaaccacaattttttttctttcaa  9012600                                     ----------->GT1   <---------YAB1                    <----------ID1  <---------AHL20(1)             ---------->DOF2  <---------AHL20(2)        ---------->DOF2                 *TSS<---------At4g35610 -DOF2                    <---------AHL20(2)               <----------DOF2      --------->ANAC46 ---------YAB1           --------->AHL20(2)            --------->YAB1 <----------DOF2 ---------AHL20(2) --------->LBD16 ----------->GT1<---------ATHB12<----------DOF2     --------->TOE2(3)   atattatttttggagaaaacccccaaatttaaaaggaaagagaaaaaatcaaatcattcatctttgagctttcttttcttctacagaaccctaatttcat  9012700                                                                                         <---------SPL7                                                                                   <---------ANAC58                                                                            <---------------AGL15                                                                           <-----------------AGL1                                                                       <---------ANAC58 <---------ANAC58                                                                       <---------ANAC58 <---------ANAC58                                                                      <-------TEIL <---------ANAC58                                                                      --------------->AtSPL3    <----                                                                      --------------->AtSPL8    =====                                                                    <---------ARR14(2) <------NtERF2           --------->HSFB2a(2)  --------->YAB1                      --------->ARR14(2)--------->ZAT18 >>>>>>>ZML2                    --------->ATHB12               --------->AtLEC2   <---------MYB46(3)< --------->HSFB2a(2)          <---------WOX13(1)            <-------TEIL  --------->SPL7<---------ANAC46 <---------HSFB2a(2)     <---------At4g35610             <---------MYB46(3)----------------->AGL1 ---   gttctaggtgtctctcgaatggttctcatctcattgattactcaatctctagggtttagtggttcatccaaattcgtaccctaatgggtgccgtagcgat  9012800                                                      <---------DAG2                                                  ------>MYB83            --------->DEAR3(1)                    ------>MYB46(1)            ----------->HVH21                     -------->P           --------->DEAR3(2)                   --------->AtMYB61                               <----           --------->At4g35610                  --------->MYB46(3)                              -----           <---------At4g35610                 <---------MYB52(2)                               <----           <------NtERF2                       <---------MYB55(2)                               -----       --------->ANAC58                        --------->MYB46(3)                               <----       --------->ANAC46                       --------->ANAC58                                 ------       --------->ANAC58                       --------->ANAC58                        --------->ANAC58     ---------->DOF2                          -------->P  --------->ANAC58     --------->HSFB2a(1)     <---------DOF5.7(2)                     --------->WOX13(1)                <---------HSFC1(2)   <    <---------ARR14(2)            --------->YAB1<---------MYB111(1)     --------->GLK1(1)      ------    --------->ARR14(2)            --------->WOX13(1)  <----------DOF2  <---------ARR14(2)      <-----   --------->DOF5.7(2)------>ZmHOX2a(1)    <---------ATHB12            --------->ARR14(2)--------->MYB52(1) --------->YAB1   --------->GLK1(2)       --------->ANAC58--------->ANAC58     <---------ZAT2  <----- --ZmHOX2a(2)     <---------ARR14(2)      --------->ANAC58--------->ANAC46     --------->HSFC1(2)---- ============================HOX2a_HOX2a --------->WOX13(1)       <---------At5g28300 --------->ANAC46 ---------ATHB12  ------->TEIL --------->TOE2(3)------->GAMYB    <-----------GT1      --------->ANAC58 ------>WOX13(1)  --------->ARR14(2)    --------->MYB46(3)--------->ANAC55(2)  --------->ZAT2 -------   caatcgtaaacgcagcgacgaatccttcaatttcattaatcaacaatcaaccaaccctttacgaaattcaccgtatttccaagcttccaagaaacgaaga  9012900 -----GLK1(2) ---->ARR11(3)                   <------NtERF2 -----ARR11(3)              --------->ANAC58            <---------HSFB2a(2) ---->ARR14(2)              --------->ANAC58            --------->HSFB2a(2) -----ARR14(2)            <--------P                   <---------ANAC46 --->HSFC1(2)          <---------HSFB2a(2)            <---------------------WRI1 ---------YAB1      --------->GLK1(2)          ------>MYB83<------ZmHOX2a(1) --->HSFB2a(1)     --------->ARR11(3)          ------>MYB46(1) ----HSFB2a(1)     <---------GLK1(2)           ----------->RAV1(1)      ----------->RAV1(2) ----HSFC1(2)      --------->ARR14(2)       --------->ANAC58      <---------TOE2(3) ----->GLK1(2)     <---------ARR14(2)       --------->ANAC46 <---------GLK1(1)           ------>ZmHOX2a(1) ---->ARR10      ----------->ARR10          --------->ANAC58 --------->GLK1(1)   ---------->DOF2   ttctcattcgctatgtctgaagattctggtaagccagcgtcttcaaacccaacaatttcgaggatttcaaggtaccctgatgctaaagctcctcttagac  9013000                                                     --------->YAB1                                                     -------->HAHB4                               --------->ARR11(1)    <---------ICU4                               --------->ARR11(3)   <---------ATHB12                        --------->ICU4        --------->GLK1(2)  --------->DAG2                       <---------GLK1(1)      <---------ARR11(3)---------->DOF2                       --------->GLK1(1)----------->GT1<---------YAB1                            <---             --------->HSFB2a(2)     ---------->DOF2<---------YAB1              <----------DOF2------             ------>ZmHOX2a(1) <---------ARR14(2)   --------->ICU4    --------->ANAC58        <------             <---------HSFB2a(2)--------->CCA1(2)  <---------TOE2(3)<------ZmHOX2a(1)      --------->ICU4    <-------TEIL     <------ZmHOX2a(1) --------->DAG2--------->ATHB12 --------->ANAC58   <---------TOE1(2)   gagagattcatgctcctagtagaggaattcttagatatggaaaggcaaaatctaatgattactgcgaaaaggacgcaaatttctttgttcgtaagtatga  9013100                                   <---------MYB52(1)                        <----------DOF2                      <---------HSFC1(2)   ----------->GT1                      <---------HSFB2a(1) <---------TOE2(3)               <----------DOF2    --------->TOE2(3)          <------ZmHOX2a(2)      ----------->GT1         --------->ARR11(3)    --------->GLK1(2)                        ----------->GT1   ---------->DOF2    --------->HSFC1(2)---------->DOF2         <---------ANAC58 ------YAB1  --------->At4g35610<-------TEIL  ---------->DOF2   <---------ANAC58     <------ZmHOX2a(1) --->YAB1<---------ARR11(3)    --------->ARR14(1)         --------->ATHB12    ---------->DOF2      <- ---YAB1<---------GLK1(1)     <---------GLK1(2)     <----------DOF2    <---------TOE2(3)         <---   tgatgcaaagagatcagctttggaagctttgagattcgttaataaaggtaaagactttgttgatttgggtgatgaggttgaaaaggaggaagttgtttct  9013200  Previous    Next  AGI:  At4g15880.1    Description:  ESD4 (EARLY IN SHORT DAYS 4); cysteine-type peptidase. similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT3G06910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70965.1); contains InterPro domain Peptidase C48, SUMO/Sentrin/Ubl1; (InterPro:IPR003653) Range:  from: 9012660    to: 9016131    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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