Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     ------>NtERF2   <------NtERF2   --------->LBD16  --------->DEAR3(1)  --------->RAP2.6(2)  --------->ANAC58  --------->ANAC46  --------->ANAC58  --------->RAP2.3(3)  --------->RAP2.3(2)  --------->RRTF1(3)  --------->RRTF1(2) --------->ERF1 --------->RAP2.3(1) --------->ATERF1(1)                                        <---------ZAT14 --------->RRTF1(1)                                         --------->At4g35610 <------NtERF2                                         <---------MYB52(1) ----->NtERF2----------->HVH21                        <-------GAMYB ---------ATERF1(1)            --------->ANAC58      <---------MYB46(3) ---------RAP2.3(1)            --------->ANAC58 --------->DEAR3(2) ------->ATERF1(2)--------->ZAT14              <---------ARR14(2) ------->DEAR3(1)--------->DEAR3(1)            --------->ARR14(2)      ----------->GT1 ------->ANAC46<---------At5g28300    --------->ARR14(2)    <---------At4g35610    <---------TOE1(2) --------ATERF1(2)--------->LBD16     <---------ARR14(2) --------->At4g35610      <-----------RAV1(2)   gccgccgcaatcgctctcaccgcagaaattgaaacgcgaggtttctccgaatcgaccgttgctgcagcgagaattgaaacaatcccaggcttctccgatt  8992600                                                                                    <------ZmHOX2a(1)                                                                                 --------->YAB1                                                                             <---------AHL20(2)           <---------HSFC1(2)                                --------->ZAT6  --------->AHL20(2)           --------->HSFC1(2)           ---------->ID1  <----------DOF2  ----------->GT1        ---------->DOF2           ------->TEIL        ---------->ID1    <---------TOE1(3) ---------->DOF2          ---------->DOF2         <---------MYB52(1)    <---------TOE2(3)         <--   ccataaaaccaaaagcttccaaatatacaaaagatgtattttgtagttttctgtttgtctttaacagtatttttagggtttaattaggatttatgtgaag  8992700                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                               <------NtERF2                                                                               <---------At4g35610                                                                               --------->At4g35610                                                                              <---------ERF1                                       ----------->RAV1(1)                    <---------ORA47(2)                                       --------->AtMYB61                      ------>NtERF2                                      --------->MYB46(3)                      <---------ATERF1(1)                                   --------->MYB46(3)                         <---------RAP2.3(1) ---                              --------->ANAC58                               <---------DEAR3(1)<-----                              --------->ANAC58                               <---------RAP2.3(2)  <--                              --------->ANAC46                           <-----------RAV1(2)  -------   ---------->ID1      --------->ALFIN1------->GAMYB                   --------->MYB52(1)    <------- <-----------RAV1(1) <---------ANAC46-------->P                     --------->REM1(1)        -------- --------DOF2  <---------ZAT6<---------------------WRI1     --------->ICU4   <---------RAP2.3(3)  <--   cttttgtggctatggaagtgatagtgtggaagacgaaacaaccacagagaagagtgagagcgatgatgctacataacaggcggctcaagacaaaattaaa  8992800                                                                      <---------AHL20(2)                                                                   --------->AHL20(1)                                                                   <---------ARR11(3)          <---------ICU4                                           <---------AHL20(1)         --------->ICU4                                     --------->CCA1(2)         <---------ATHB12                                  --------->ARR14(2) ------>ARR11(3)                                           <---------ARR14(2)                      <- ----TOE2(3)                --------->ICU4                --------->KAN4(1)                      <--- -------ARR11(3)            <---------YAB1                <----------TaMYB80          <----------DOF2 --->DOF2<---------YAB1  ------------>CBF                <---------KAN4(2)           <---------ANAC58 --AHL20(2)      <----------DOF2                         ---------->TaMYB80  --------->ATHB12   <---- ->AHL20(2)--------->WOX13(1) <------------CBF         <------ZmHOX2a(1)<---------AHL20(2)   <------- -------GLK1(2)  <---------DAG2                  ---------->DOF2   --------->ARR11(3)<---------ANAC58   gattttgcataatcattcacttttggggtcaatattgaaactttcaaatttgaaagaggaatatacgaatattttaaaatgtttggggcttatttgttat  8992900                                                                         <---------SPL7                                                                        --------->DEAR3(1)                                                                       <------NtERF2                                                                      --------->LBD16                                                                      ------>NtERF2                 -                                                                     <---------ALFIN1              --                                                                     --------->ANAC46              --                                                                     --------->DEAR3(1)            --                                                                    <---------LBD16                <-                                                                 ------>MYB46(1)                   --                                                                 ------>MYB83                     ---      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       --------->AtMYB61                  ---    <---------AHL20(2)                                     ----------->HVH21                      --- --------YAB1                ----------->GT1              <---------ANAC58                        <-- --------GT1              <-----------RAV1(1)             <---------ANAC58                        --- -----YAB1            ------------>CBF                   --------->At4g35610                     <--- --YAB1              <-----------GT1--------->YAB1      <---------MYB46(3)                  <--------   tactatttttttttttttttttttttcaatgtggctaataagaaactctcagtctcagtggctgaccatccccgccgtagccatggcagttttccgatgc  8993000        <-----------GT1       <-----------GT1   <----------DOF2 ----->NtERF2 ------->DEAR3(1) ------->RAP2.3(2) ------->RRTF1(3)                         --------->LBD16 --------ANAC46                         <---------LBD16 ------->RAP2.3(3)                 --------->ANAC58 ------>DEAR4(2)                   --------->ANAC46 ------>RAP2.3(1)                  --------->ANAC58 ------>ATERF1(1)                 --------->SPL7 ----NtERF2                  --------->LBD16         --------->GLK1(2) <---------MYB52(1) ------>ORA47(2)      ----------------------->TaNAC69(2)              --------->LBD16        <------- ------RAP2.3(1)     <-----------GT1  <---------ALFIN1      ---------->DOF2                <---------ANAC58 -At4g35610   ------>ZmHOX2a(1) <---------SPL7 <------ZmHOX2a(1)    <---------LBD16        <---------ANAC58   gccgtctttttatctccttcgagtttccttccgtcgtactccaccggaaggagagtttctgtaaaagttatccggtgttcttcggcttcgattccgttct  8993100                       --------->TOE1(2)                       --------->TOE2(2)                                                      <------NtERF2                      ----------->RAV1(2)     --------->TOE1(3)                              --------                      <---------ANAC58 ------>ZmHOX2a(1)                                    ---------                      <---------ANAC58--------->TOE1(3)                       --------->YAB1---------                    <-----------GT1   --------->TOE2(3)                   --------->ICU4   <---------LBD16          ---------->DOF2 ----------->HVH21   --------->TOE2(3)           <---------YAB1 --------->ANAC58 --MYB52(1)  ----------->GT1       <---------ARR11(3)  ---------->DOF2  --------->YAB1   --------->ANAC58   gtcgaagtcatcaaaaggaaaattacctgcgacccaaaatccttagaaccctaaatccaaagctcaagagacagtcataatcggaatcgaaacgccggaa  8993200              <---------ANAC46         --------->ANAC46         --------->ANAC58                                                                      ------     ------>ZmHOX2a(1)                                                                        -------   ------>ZmHOX2a(2)                  <-------TEIL                                            <------ZmHOX2a(2)   =====================================HOX2a_HOX2a                                           <------ <---------ARR11(3)                  --------->CCA1(2)        <-----------HVH21              <------- --------->ARR11(3)                  --------->GLK1(2)       <---------ANAC46                <------- ->LBD16 --------->ANAC58           <---------ARR14(2)    <---------MYB52(1)  ----------->GT1<------- >RAP2.6(2)----------->HVH21     <------ZmHOX2a(1)       <-------GAMYB ----------->GT1       -------- >LBD16---------->DOF2    <---------REM1(1)         --------->ZAT2    <---------TOE2(3)  ------------   aatgatccttcaagcgacgtagtttctgatgtagaggagattcaggtcttaagtagctcggttgtgtcaaatgaggtaaatggtatatcaactaagatct  8993300                                        --------->KAN4(2)                                        --------->ARR14(2)                                       --------->HSFB2a(1)                                       --------->KAN4(1)                                       <---------HSFC1(2)                                          <-                                       <---------HSFB2a(1)                                         --                                       <----------TaMYB80                                      <----- --------->LBD16                      ---------->TaMYB80                                   --------->ARR14(2) >ZmHOX2a(2)                          <---------KAN4(2)                                    <---------ARR14(2) -->GLK1(1)                       ------>ZmHOX2a(2)                        --------->HSFB2a(2) ------ ---GLK1(1)                  <--------P<---------KAN4(1)                   <---------HSFB2a(2) ------ --AGP1--------->MYB52(2)    <---------WOX13(1)                           <---------ANAC46--------->GLK1(1) --ARR11(3)                 <-------GAMYB                                 <---------LBD16 <---------GLK1(1) ----ARR10                 <---------MYB46(3) <----------DOF2     <---------MYB52(1)    ------->GAMYB ->ARR11(3)               <---------YAB1<---------ARR14(2)      <----------DOF2        --------->ANAC46 --------->WRI1           <---------TOE2(3)   <---------DAG2  <---------At4g35610    --------->MYB52(1)   ctccgaagttagtagcgaagtatggattgtggttgatcggaatattcgcttttcaaactgtttgtgctgttttgtttctgggagactcaacgaaatccga  8993400                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                 <---                                                                                                 ====                                                                                                 ----                                                                                                 ----                                                                                                 ====                                                                                                 ====                                                                                                 <---                                                                                                 ----                                                                                                 <---          --------->HSFC1(2)                                                                     ----       <------NtERF2                                                                             ----       <---------MYB52(1)                                                                   <--------      --------->LBD16                                                                     --------->ATHB12    <---------LBD16                                                                       <---------ICU4  --------->ANAC46                                                                        --------->YAB1 --------ARR14(2)                                                                        --------->ICU4 ------->ARR14(2)                                                                  <------ZmHOX2a(2)- ----HSFB2a(2)                         <------MYB46(1)             --------->YAB1<---------GLK1(1)--- --->LBD16<---------HSFC1(2)----------->GT1          --------->ARR11(3)          --------->GLK1(1)<-- --->HSFB2a(2)  --------->ANAC55(2)    <------MYB83 <------ZmHOX2a(1)       <---------ZAT14 ---------   gaaaacgccggaagtttcaagtgatagtgagggtaacaatttggttttgctagaggatgttgaaatgaatgagaagattgcagagatcagaatgatggca  8993500  Previous    Next  AGI:  At4g15810.1    Description:  chloroplast outer membrane protein, putative. similar to TOC159 (PLASMID PROTEIN IMPORT 2) [Arabidopsis thaliana] (TAIR:AT4G02510.1); similar to hypothetical protein OsJ_016393 [Oryza sativa (japonica cultivar-group)] (GB:EAZ32910.1); contains InterPro domain AIG1; (InterPro:IPR006703) Range:  from: 8989175    to: 8992604    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g15820.1    Description:  wound-responsive protein-related. similar to EMB1703 (EMBRYO DEFECTIVE 1703) [Arabidopsis thaliana] (TAIR:AT3G61780.1); similar to unknown [Picea sitchensis] (GB:ABK26563.1) Range:  from: 8992983    to: 8995201    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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