Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        ------>ZmHOX2a(1)                                                                  <---------ARR14(2)                                                                --------->HSFC1(2)                                                                <---------HSFC1(2)                                                               --------->O2                                                               <---------O2                                                            --------->DREB2C(2)                                                            --------->DEAR3(1)                                                            --------->At1g77200                                                            ----------->HVH21       --------->ANAC58     <-----------GT1                --------->DEAR3(2)     --------->At4g35610       --------->ANAC58<---------ZAT14            ----------->GT1 --------->ARR14(2) -------->ZAT14        --------->ZAT14     ---------->DOF2<---------At5g28300     ----------->RAV1(2) ---MYB52(2)  --------->TOE2(3)        ------>ZmHOX2a(1) <-----------GT1     <---------ICU4   acttcactctcgcaaacctcatcactgttctcaccatcttcctcccaaagacgagtaattcaccgacgtttcctcgtcaacatcacctgcaaatggtcta  8992200                                        --------->ZAT6                                      ------>MYB46(1)                                      ------>MYB83                                     --------->MYB55(1)                                    <---------MYB52(2)                                    <---------MYB55(2)                ------->GAMYB                                    <---------MYB111(1)             -------->P            --------->At4g35610     <---------MYB59             --------->TOE1(3)            <---------ZAT2          --------->AtMYB61           --------->TOE2(3)            --------->ZAT2          <---------MYB46(2)        -------->P            ----------->RAV1(2)     <---------MYB111(2)   --------->ARR14(2)               ----------          <---------ALFIN1         --------->ANAC46       <-----------ARR10              ------>ZmHOX2a(1)    <---------ALFIN1             <---------ALFIN1         <---------ARR14(2)         --------->ARR14(2)   taaatcccactcccacctgaaattcacttccatctccacctaactcttcccctagtagcctatctaccctaaccccatccaaaaccacatcctctaacac  8992300                                                                                                 <---                                                                                               <-----                                                                                               ------                                                                                            ---------                                                                                --------->ZAT6<------                                                                                --------------->AtSPL8                                                                                --------------->AtSPL3                                  <---------YAB1                               <---------At5g28300 ->HVH21                    <-------TEIL                              <-------TEIL         <---------YAB1   agtctcatcttcatcagtctcaaaatcaagtccattactataactactagcttcactacttgctgagttatgttcatcagttacagtaccagtatcatca  8992400                        --------->ANAC58                                                            <                        --------->ANAC58                                                            <   ------>ZmHOX2a(1)  <-----------------AGL1            ------->TEIL                               --  --------->TOE2(3)  --------->ZAT18                 <---------MYB52(2)                            -- ------YAB1          <-------TEIL            --------->At4g35610                                   -- ----ICU4            <---------ZAT18         <---------At4g35610                                   <- --->YAB1         --------->At4g35610     --------->At4g35610                              --------->At4g35610 >YAB1          <-----------RAV1(2)       <---------At4g35610            <-----------HVH21 <---------At4g35610 ---YAB1   --------->YAB1                ----------->RAV1(1)       <---------SPL7 --------->MYB52(1)-   tcatcctcatcaattgtaacaggtgcacgaattggaacagaaccagcagatgaaaacgaacccagagagagtacgcgtgagaagaaacgaatcagctctt  8992500   --------->LBD16   <------NtERF2   ------>NtERF2  --------->RRTF1(2)  --------->RAP2.3(2)  --------->RAP2.3(3)  --------->RAP2.6(2)  --------->DEAR3(1)  --------->ANAC46  --------->ANAC58  --------->RRTF1(3)  --------->ANAC58 <------NtERF2 --------->ERF1 --------->RRTF1(1)                                         <---------ZAT14 --------->ATERF1(1)                                        --------->At4g35610 --------->RAP2.3(1)                                   <---------MYB52(1) ---------ATERF1(1)                                   <-------GAMYB ---------RAP2.3(1)            --------->ANAC58      <---------MYB46(3) ------->DEAR3(1)--------->DEAR3(1)             --------->DEAR3(2) ------->ATERF1(2)--------->ZAT14              --------->ARR14(2) ------->ANAC46<---------At5g28300    <---------ARR14(2)    <---------At4g35610    <---------TOE1(2) --------ATERF1(2)--------->LBD16     --------->ARR14(2) --------->At4g35610      <-----------RAV1(2) ----->NtERF2----------->HVH21 --------->ANAC58<---------ARR14(2)      ----------->GT1   gccgccgcaatcgctctcaccgcagaaattgaaacgcgaggtttctccgaatcgaccgttgctgcagcgagaattgaaacaatcccaggcttctccgatt  8992600                                                                                    <------ZmHOX2a(1)                                                                                 --------->YAB1                                                                             <---------AHL20(2)           <---------HSFC1(2)                                --------->ZAT6  --------->AHL20(2)           --------->HSFC1(2)           ---------->ID1  <----------DOF2  ----------->GT1        ---------->DOF2           ------->TEIL        ---------->ID1    <---------TOE1(3) ---------->DOF2          ---------->DOF2         <---------MYB52(1)    <---------TOE2(3)         <--   ccataaaaccaaaagcttccaaatatacaaaagatgtattttgtagttttctgtttgtctttaacagtatttttagggtttaattaggatttatgtgaag  8992700                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                               <------NtERF2                                                                               --------->At4g35610                                                                               <---------At4g35610                                                                              <---------ERF1                                       ----------->RAV1(1)                    <---------RAP2.3(1)                                       ------->GAMYB                          <---------ORA47(2)                                      --------->MYB46(3)                      <---------ATERF1(1)                                   --------->MYB46(3)                         ------>NtERF2       <--                              --------->ANAC46                               <---------DEAR3(1)<-----                              --------->ANAC58                               <---------RAP2.3(2)  <--                              --------->ANAC58                           <-----------RAV1(2)  -------   ---------->ID1      --------->ALFIN1--------->AtMYB61               --------->MYB52(1)    <------- <-----------RAV1(1) <---------ANAC46-------->P                     --------->REM1(1)        -------- --------DOF2  <---------ZAT6<---------------------WRI1     --------->ICU4   <---------RAP2.3(3)  ---   cttttgtggctatggaagtgatagtgtggaagacgaaacaaccacagagaagagtgagagcgatgatgctacataacaggcggctcaagacaaaattaaa  8992800                                                                      <---------AHL20(2)                                                                   --------->AHL20(1)                                                                   --------->ARR11(3)          <---------ICU4                                           <---------ARR11(3)         <---------YAB1                                     --------->CCA1(2)         --------->ICU4                                    --------->ARR14(2) -------ARR11(3)                                           <---------ARR14(2)                      <- ----TOE2(3)                <---------YAB1                <----------TaMYB80                     <--- -------GLK1(2)             --------->ICU4                --------->KAN4(1)           <----------DOF2 --->DOF2<---------ATHB12------------>CBF                <---------KAN4(2)           <---------ANAC58 --AHL20(2)      <---------DAG2                          ---------->TaMYB80  --------->ATHB12   <---- ->AHL20(2)--------->WOX13(1) <------------CBF         <------ZmHOX2a(1)<---------AHL20(2)   <------- ------>ARR11(3) <----------DOF2                 ---------->DOF2   <---------AHL20(1)<---------ANAC58   gattttgcataatcattcacttttggggtcaatattgaaactttcaaatttgaaagaggaatatacgaatattttaaaatgtttggggcttatttgttat  8992900                                                                         <---------SPL7                                                                        --------->DEAR3(1)                                                                       <------NtERF2                                                                      --------->LBD16                                                                      ------>NtERF2                 -                                                                     --------->DEAR3(1)            --                                                                     --------->ANAC46              --                                                                     <---------ALFIN1              <-                                                                    <---------LBD16                --                                                                 ------>MYB83                      --                                                                 ------>MYB46(1)                  <--      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       --------->AtMYB61                  ---    <---------AHL20(2)                                     ----------->HVH21                      --- --------YAB1                ----------->GT1              <---------ANAC58                        --- --------GT1              <-----------RAV1(1)             <---------ANAC58                        --- -----YAB1            ------------>CBF                   --------->At4g35610                     <--- --YAB1              <-----------GT1--------->YAB1      <---------MYB46(3)                  <--------   tactatttttttttttttttttttttcaatgtggctaataagaaactctcagtctcagtggctgaccatccccgccgtagccatggcagttttccgatgc  8993000        <-----------GT1       <-----------GT1   <----------DOF2 ----->NtERF2 ------->DEAR3(1) ------->RRTF1(3) --------ANAC46                           --------->LBD16 ------->RAP2.3(3)                      <---------LBD16 ------->RAP2.3(2)                 --------->ANAC58 ----NtERF2                        --------->ANAC46 ------>DEAR4(2)                   --------->ANAC58 ------>ATERF1(1)                 --------->SPL7 ------>ORA47(2)             --------->LBD16         --------->GLK1(2) <---------MYB52(1) ------>RAP2.3(1)     ----------------------->TaNAC69(2)              --------->LBD16        <------- ------RAP2.3(1)     <-----------GT1  <---------ALFIN1      ---------->DOF2                <---------ANAC58 -At4g35610   ------>ZmHOX2a(1) <---------SPL7 <------ZmHOX2a(1)    <---------LBD16        <---------ANAC58   gccgtctttttatctccttcgagtttccttccgtcgtactccaccggaaggagagtttctgtaaaagttatccggtgttcttcggcttcgattccgttct  8993100  Previous    Next  AGI:  At4g15810.1    Description:  chloroplast outer membrane protein, putative. similar to TOC159 (PLASMID PROTEIN IMPORT 2) [Arabidopsis thaliana] (TAIR:AT4G02510.1); similar to hypothetical protein OsJ_016393 [Oryza sativa (japonica cultivar-group)] (GB:EAZ32910.1); contains InterPro domain AIG1; (InterPro:IPR006703) Range:  from: 8989175    to: 8992604    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g15820.1    Description:  wound-responsive protein-related. similar to EMB1703 (EMBRYO DEFECTIVE 1703) [Arabidopsis thaliana] (TAIR:AT3G61780.1); similar to unknown [Picea sitchensis] (GB:ABK26563.1) Range:  from: 8992983    to: 8995201    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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