Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->DAG2                                                                       ---------->DOF2                                                                   --------->ANAC58                                                                   --------->ANAC58                 -                           <---------At4g35610                   <------ZmHOX2a(1)               <---                           --------->At4g35610                  <----------ID1           ------->TEIL                         --------->ANAC46                     --------->DAG2             --------->ARR14(2)                       --------->ANAC46     ------->TEIL      <---------------AtSPL8     <-----------ARR10 ---------DOF2  --------->YAB1        <-------TEIL           ---------->DOF2            <---------GLK1(2)   actttcttagtactactagcattacacacagcaaactcgatacatgaacatttctaagtaagaaaaaggacgaaaaagttaacttatactgaatctcccc  8988000               --------->ANAC58               --------->ANAC46      ------>ZmHOX2a(1)      --------->LBD16    ------>ZmHOX2a(2)   --------->GLK1(2)   <------ZmHOX2a(2)  <---------ARR14(2)                                                                                -  --------->ARR14(2)                                                                            <----  --------->AGP1                                                                               ------  <---------GLK1(2)                                     <---------ARR14(2)                   <-------  <---------ARR11(3)                     --------->ARR14(2)             ----------->GT1      --------  --------->ARR11(3)                     <---------ARR14(2)    <---------At4g35610           XXXXXXXX ---------->ARR10         --------->ARR11(3)<-----------GT1    --------->At4g35610           <------- --------HVH21 --------->ANAC58  ---------->DOF2        --------->ARR14(2)                   --------   atcagatcctggacttcacgatactagagttcttgaaaagccgaattcacaagttcaaaatccacagatgaaaacagaaaatcgagcaaatgcaaaatct  8988100        --------->ANAC58        --------->ANAC58   <-----------GT1 -------->YAB1                                                                                    --- -----YAB1                                                                                        --- --->TOE2(3)                                                                             --------->YAB1 ----ARR10                                                              --------->YAB1--------->TOE2(3) ->ARR11(3)                                    --------->ANAC46<---------WOX13(1)   -------->P <----- XXXXXXXXXXXX>MIR406                  <-----------GT1       <---------YAB1 --------->MYB52(1)  ------ --ARR11(3)     <---------GLK1(2)  <---------GLK1(1)        <---------ATHB51      --------->MYB46(3) ->GLK1(2)  ---------->DOF2        --------->GLK1(1)<---------ICU4  ------>ZmHOX2a(2) --------->YAB1   tattgtaacccagcaaaagatgctctaaatcgtccagatttcactataaactcaacatttcgataattgatctacaataacagaacaaccataagaatat  8988200                                                                                                   --                   --------->At5g28300                                                            ---                  --------->TOE2(3)                                                            ------            --------->ANAC46                                                                   ------      --------->GLK1(1)                  --------->CCA1(2)                                   <-------      --------->GLK1(2)                 --------->ARR11(3)                               <---------ANAC58     <---------GLK1(2)         ------>MYB83                                              <---------ANAC58     --------->ARR14(2)        ------>MYB46(1)  ------>ZmHOX2a(1)              ------->TEIL--------->DOF5.7(2) ------>TOE1(2)   ----------->GT1       <---------ARR11(3)           --------->LBD16     <---------ANAC55(2) ------>TOE2(2)   --------->TOE1(3) --------->LBD16              --------->ARR14(2)      <---------ANAC46 ----ARR11(3) <---------ZAT14--------->TOE2(3) --------->TOE2(3) <---------ARR14(2)<---------TOE2(2) --->ARR11(3) --------->ZAT14<---------MYB59   --------->TOE1(3)<---------GLK1(1)  <---------TOE1(2)   catgcgagattcccactaaaccgtaaaaaaacctaatccgaagatatatccttaaatgcaatcgacaaatccgaataaacgagcctaggtttcgtgaacg  8988300                                              --------------->AGL15                                              <---------------AGL15                                             ----------------->AGL3                                       <---------RVE1(1)                                       --------->GLK1(1)                                       <---------CCA1(1)                                      <---------ARR14(2)                                    ----------->GT1 --------->ANAC46                  <---------ANAC46 --------->ANAC58                 --------->ATERF1(1)                 --------->ATHB12 --------->ANAC58       --------->ARR11(3)  <---------At5g28300  <---------ANAC58 <----------ID1         <---------ARR11(3) <-----------GT1       <---------ANAC46 -------->DOF2         --------->YAB1<------NtERF2               <---------ANAC58 ------>ARR14(2)      <---------ATHB12--------->ARR14(2)     <---------ANAC58                       < --->ANAC58       --------->ZAT18 <------NtERF2              <---------ANAC58                  <----- --->ANAC58   --------->DAG2    <---------DEAR3(1)    <---------TOE2(3)           ----------->GT1   - --DOF5.7(2) ---------->DOF2   <------ZmHOX2a(1)      <---------TOE1(3)  ------>ZmHOX2a(2)  <--------   aaaacgcaaaatcgaaaaagcgcaatgatattaggaggcggatatttaccatttttagggttttcttgcgagtgatcggaaaactggagaaattttgatt  8988400                                                                                       --------->TOE2(3)                                                                                       --------->TOE1(3)                                                                                       <---------DAG2                                                                                     -------->P                                                                                     ------>MYB83                                                                                     ------>MYB46(1)     --------->DAG2                                                                 <---------ALFIN1    ---------->DOF2                                                                <---------ALFIN1 ---------At4g35610   *TSS<------ZmHOX2a(1)                                      ------->GAMYB ----GLK1(1)      ----------->HVH21                                       <---------ZAT6 -------->At4g35610--------->MYB52(1)                                   <---------At5g28300 -YAB1          --------->CCA1(2)         --------->ICU4              <---------MYB52(1)          ---   tcagcgaaaagcgatgagagacgacggaggagaagagtgatgcgatgtttataaaacgagaagagaaacgctgttactgttaaccccaaccttataggta  8988500                                                       --------->ALFIN1                                                     <---------ANAC46                                                     <---------ANAC58                             <--                                                     <---------ANAC58                             ---                                                    <---------MYB46(3)                        <------                         --------->TOE2(3) --------->ATHB12                                <---------AHL20(2)                    <----------DOF2       <---------YAB1         --------->ALFIN1       <---------AHL20(1)                 <---------ALFIN1      <---------MYB52(1)   <------ZmHOX2a(2)           --------->AHL20(1)         ---------->DOF2 <----------DOF2  --------->ICU4   --------->ARR11(3)           <---------ARR11(3) --------->CBF ------>NtERF2         --------->YAB1 --------->MYB55(2)                  --------->ARR11(3)   tacaatgtccaaaatgccccctctttactttagtttctatcgttatgattcgattgggtgggatcatgtgtgtgtgattcaaatttcaaatatttttatg  8988600                          <------ZmHOX2a(1)                        <---------TOE2(3)                        <---------TOE1(2)                    <------ZmHOX2a(2)                   <---------ARR11(3)                   --------->ARR14(2)               ------>ZmHOX2a(2)               ==================HOX2a_HOX2a              ===================HOX2a_HOX2a              <------ZmHOX2a(2)              --------->CCA1(2)          --------->ATHB12             <---------ARR11(3)          --------->ATHB51    <------MYB46(1)<---------ARR14(2)    <---------ICU4    <------MYB83   --------->AGP1       --------->ICU4   --------->MYB46(2)------>ZmHOX2a(2)  <---------YAB1   --------->MYB59 --------->ARR11(3) --------->YAB1                            <---------ICU4  <---------MYB55(1)=============HOX2a_HOX2a                                    --------->YAB1 <---------MYB52(1)<---------AGP1     <---------ICU4                  --------->AHL20(2) -----TEIL   --------->AGP1 <---------YAB1                            <---------AHL20(2) ----------->GT1 ---->TEIL   --------->ARR11(3)      <---------ATHB12    <---------ARR14(2)    --------->ICU4       < ---------AtSPL3  <---------CCA1(2)  --------->ICU4      --------->ARR14(2)    <---------ATHB12     <   tacgtttggtattgagatctagatcttaggatgattcaaatcattattgtggatgttcaaatctgcaaacatttatttgtaatcatcttatttgtaaatt  8988700                         <---------YAB1            ---------->ID1 ---------->DOF2                                                        <--      <----------DOF2  --------->ATHB12                  <-----------GT1                 <<<<<<<GRF7      <---------DAG2  <---------YAB1                <---------ANAC46                 ----------->RAV1(2) ---------ANAC58      --------->ICU4                ----------->GT1      --------->MYB52(1)     ----- ---------ANAC58------>ZmHOX2a(1)                <-----------RAV1(1)     <---------ICU4----------->HVH21   tggcttaactttttgttcctcttgatgattaaaggcagaccaattcgaattgtgttgtataacgacttatctcactaatggcataaaccctgacacattg  8988800                                                                  <-------GAMYB                                                          <---------TOE2(3)                                                    --------->AHL20(2)                                                    --------->AHL20(1)                                                    <---------AHL20(1)                                                   --------->CCA1(2)                                                  --------->ARR11(3)              <---------ARR11(3)                                                  <---------ARR11(3)            <---------YAB1                                         --------------->AGL15   --------->MYB111(2)              --------->ARR14(2)         <---------------AGL15   <---------MYB46(3)              <---------ARR14(2)      <-----------GT1    <-----------GT1        --------->ICU4   <---------ZAT14    --------->MYB46(3)----------------->AGL2  <--------P    --------->YAB1 -------YAB1  --------->ARR11(1)    <---------ANAC58<---------ARR11(3)       <---------YAB1 ---->YAB1  ----------->ARR10       <---------ANAC58--------->ARR11(3)  --------->ZAT6<-----------GT1   atgactgaagtatgtagatttggaacagcctatttgtttcttaccatcaatagatatattaacgaggttgttgaacactatcatgattttacaagagaaa  8988900  Previous    Next  AGI:  At4g15802.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93842.1); contains InterPro domain Heat shock factor binding 1 (InterPro:IPR009643) Range:  from: 8986623    to: 8988422    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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