Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <------ZmHOX2a(2)                                                                            --------->ARR14(3)                                                                            <---------ARR14(3)                                                                            <---------ARR11(3)                                                                            --------->ARR11(3)                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                             --------->ARR14(2)                                                             <---------ARR14(2) ------>ZmHOX2a(1)         <---------CCA1(2)                                   <-----------ARR10  --------->LBD16    <---------At4g35610                               ---------->DOF2     ----------->ARR10    --------->At4g35610                            --------->ANAC58     --------->YAB1              < ----->WOX13(1)                       <-----------RAV1(1)    --------->GLK1(2)------>ZmHOX2a(2)     - ----ATHB12 --------->TOE2(3) --------->ANAC46     --------->ANAC58<---------ATHB12               <--   aatctaagctcaaatctcaatggaactaatacacaaaacactgttgtatcgccaagtaatgcgaatccaatctatgaagatcctgaaaatgccttaagtt  8981400               <---------MYB52(2)         --------->TOE1(3)              --------->At4g35610   --------->YAB1              <---------At4g35610--------->WOX13(1)              --------->ZAT2    <-------TEIL          <---------ARR14(2)   <------ZmHOX2a(2)          --------->ARR14(2)  <---------ARR14(2)         <---------GLK1(1)    --------->ARR14(2)                              --------->LBD16 ---------At4g35610           --------->AGP1                                 <---------HSFB2a(2) -------->At4g35610 ----------->RAV1(2)   --------->TOE2(3)                  --------->HSFB2a(2)----- ---------RAV1(2) -------->P  <---------ARR11(3)                       --------->MYB52(2)--------->CCA1(2)   tcagatgatgcatatcagctaaccctgagctagatccatcaaaaccttaatggcttcaaactaaaaacattgttcgtttccagagaagaagatagagaga  8981500                                                                                    --------->HSFC1(2)                                                                                    --------->HSFB2a(1)                                                                                    <---------HSFC1(2)                                                                                    <---------At4g35610                                                                       <---------ANAC58                                                                       <---------ANAC46  --------->HSFB2a(2)                                                                       <---------ANAC58  <---------HSFB2a(2)                                 <---------TOE2(3)        <---------ZAT18      --------->ANAC58                       --------->ANAC58                   --------->ZAT14      --------->ANAC58                   <---------HSFB2a(2)           <-------GAMYB     <-------GAMYB    <---------HSFB2a(1)                   --------->HSFB2a(2)<---------AtMYB61   <---------ZAT14    <------ZmHOX2a(1)   --------->MYB52(1)  --------->ANAC58      ------>ZmHOX2a(2)    <-----------RAV1(1) --------->GLK1(2) ------>GT1   <---------HSFB2a(1)<---------TOE1(3)        --------->ZAT18   <---------SPL7   gtgacaaaccgtaggcatcttcgacaaggaaattgaaggtatggtgatcgcagttgtaagtgaacttgctgttgctggaggacggaagcttctggagaca  8981600                                                  <------ZmHOX2a(2)                                                  =================HOX2a_HOX2a                                    --------->ARR14(2)                                    <---------ARR14(2)                                    --------->ZAT14                                    <---------ZAT14--------->YAB1                                 <---------ANAC46 <---------YAB1                                --------->MYB59  --------->ARR11(3)    ------->TEIL         <--------                             --------->ARR14(2)  <---------ARR11(3)<------NtERF2       --------->GLK1(2)             ----------->GT1 <---------ARR14(2) <------ZmHOX2a(1) ------>NtERF2       <---------GLK1(2)   ----------->RAV1(1)<---------ANAC58      <---------ANAC46     <---------ETT(2) <-----------GT1 --------->At4g35610  <---------ANAC58     <------NtERF2    ------>ZmHOX2a(1)   --------->CCA1(2) <---------At4g35610  <---------ANAC46   <---------DEAR3(1) ----------->RAV1(2)>>>>>>>>>GATA-1   ctgagcagcaatagacgggaaattgcctgtgaattcggtatactcggcgaggatcatagttcctctggcgacgaagctatagataaacgattcttgaccc  8981700           <------NtERF2          ------>NtERF2         <---------ALFIN1         --------->DEAR3(1)                                                              --------->At4g35610        <------NtERF2<---------ARR14(2)                                                  <---------At4g35610        --------->ATERF1(1)                                                           <----------DOF2       <---------ATERF1(1)  <--------P                                               --------->TOE2(3)      --------->ANAC58     <---------ZAT2          ---------->DOF2          <----------DOF2   -------      --------->ANAC58     --------->ZAT2    ---------->DOF2       <----------DOF2<-----------GT1 -WRKY18(1)<-----------------AGL1  ----------->HVH21     ---------->DOF2 *TSS   <----------DOF2   attttgagtcgccaccgagtatggaaccgagttggctcagacagagagaaagagaaagagaaagagagtctttttattctttctttacctttgctgcaaa  8981800                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                           <---------                                                                                           <---------                                                                                           <---------                                                                                           <---------                                                                                          ---------->ID1                                                                                         <-----------GT1                                                                                      <---------AHL20(2)                                                              <----------DOF2         <---------ICU4                                                              <---------DAG2          --------->AHL20(2)                                                           <-----------GT1         --------->AHL20(2)                 ----------->HVH21                        <-----------GT1         <---------AHL20(2)                --------->LBD16                      --------->AHL20(2)           --------->AHL20(2)                <-----------HVH21                    <---------AHL20(2)        <---------AHL20(2)               --------->ANAC46                  <---------YAB1               <---------AHL20(2) --->DOF2<----------DOF2 --------->ANAC46      <---------AHL20(2)             --------->AHL20(2)   gaaaccaagtactttgcccgtgactcaactcaactacatttcttagtttttatttttaattttcctttttgtatactaaattaaataattttttcttttt  8981900          <---------AHL20(2)    <------ZmHOX2a(1)   <------MYB83   ----------->GT1   <------MYB46(1)    <-----------GT1 <--------P       <---------AHL20(2)          --------->AHL20(2) ------>AGL15  --------->ARR11(3)            <---------YAB1 -------AGL15  <---------ARR11(3)            --------->ICU4 --DOF2   --------->AHL20(2)            <---------ZAT6 --------AGL3  <---------AHL20(1)<---------AHL20(1)                                  ------->TEIL --------AGL2  --------->AHL20(1)--------->AHL20(2)                                <-------TEIL --------AG<---------AHL20(2)    <---------AHL20(2)                      --------->DAG2        ------ --------AGL1 <---------AHL20(2)--------->AHL20(2)--------->YAB1        ---------->DOF2   <---------AHL20(2)   ttggtaggaaaattaaatattttttttcttcatattaaatttgtgttattatttataaatctaatacaattcaaaaaagcgaagatgcatcttaaatttc  8982000             <---------------------WRI1          ----------->GT1  <------ZmHOX2a(1) --------->ANAC58 ----------->GT1                    --------->WOX13(1) --------->ANAC58                <---------ARR11(3) --------->YAB1                  ----------->GT1 --->RAP2.6(3)          ---------->DOF2    --------->YAB1        <----------DOF2--------->AHL20(2)  -   ggcaggaaataagtgtgaaatactcacaaagtcaatatcaatctatgaaaacaatagtattttgatgctttttaaaacacaaaaaaatgtaaaacttatg  8982100                                               <---------LBD16                                               --------->LBD16                                           --------->GLK1(2)                                        --------->AHL20(1)                <---------AHL20(2)                                        <---------AHL20(1)                --------->AHL20(2)                                        <---------AHL20(2)                <---------AHL20(1)                                        --------->AHL20(2)                --------->AHL20(1)                                       --------->AHL20(2)         <---------ANAC55(2)                                   --------->AHL20(2)      ------->GAMYB --------->AHL20(2)      <---              ---------->DOF2--------->ANAC46<---------LBD16  <-----------HVH21                  ----      --------->AHL20(2)------->TEIL   <---------AHL20(2)-------->P  --------->AHL20(2)          <--- ---------->GT1      --------->ICU4<---------AHL20(2)  --------->MYB46(3)<---------AHL20(2)      ----   catagtgaataaatgaaaaagaaatgaatatacagaataaaataaattctggggaaaacaaccctatcacataaaataaattttgaaatgttgtcatatt  8982200                                         ------->GAMYB                                        --------->ANAC58                                   --------->ANAC58                                                 <                                   --------->ANAC58                                                 <                                 <---------ANAC46                                                   <     <---------AHL20(2)          <---------ANAC58     <---------AHL20(2)                            -     --------->AHL20(2)          <---------ANAC58    *TSS                                           <  <---------AHL20(2)          --------->ALFIN1       <---------AHL20(1)                ------>MYB46(1) <---------AHL20(2)         --------->ALFIN1         --------->AHL20(1)                ------>MYB83 - --------->AHL20(2)         <-----------RAV1(1)      <---------AHL20(2)               --------->WOX13(1) ------AHL20(1)           <---------ANAC46           --------->AHL20(2)           <-----------GT1   - ----->AHL20(2)           <---------ANAC58 --------->bZIP60(1)        --------->MYB52(2)            < ------AHL20(2)           <---------ANAC58 <---------bZIP60(1)<---------YAB1    <----------DOF2     - ----->AHL20(1)         <---------YAB1  --------->ANAC58     <---------TOE1(2)  <---------DAG2     <-   ttattaattttttgttttttgaaattttgagtgtggctcgcaacgacatcactaatttattctcatgtttgtttgtttctcactttaccaatctcactta  8982300  Previous    Next  AGI:  At4g15780.1    Description:  ATVAMP724 (Arabidopsis thaliana vesicle-associated membrane protein 724). Identical to Vesicle-associated membrane protein 724 (VAMP724) [Arabidopsis Thaliana] (GB:O23429;GB:Q6ID96); similar to ATVAMP725 (Arabidopsis thaliana vesicle-associated membrane protein 725) [Arabidopsis thaliana] (TAIR:AT2G32670.1); similar to VAMP7B (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7B) [Arabidopsis thaliana] (TAIR:AT1G04750.1); similar to SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT2G33120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70980.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterP Range:  from: 8979890    to: 8981773    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g15790.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO70981.1) Range:  from: 8982253    to: 8984218    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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