Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <------ZmHOX2a(2)                                                          --------->ARR14(2)                                                          <---------ARR14(2)                           -------->P                     <-----------ARR10                         <---------MYB46(2)              <---------ARR14(1)                         <---------MYB111(1)            --------->LBD16                         <---------MYB59          --------->WRKY12                     ----------->HVH21            --------->WRKY38(1)                   --------->O2                  <---------MYB52(1)                   <---------O2      --------->YAB1   <---------LBD16            --------->DAG2 ------>MYB83         <-------GAMYB           ---------->DOF2 ------>MYB46(1)      --------->At4g35610           --------->AHL20(2) ----->GLK1(2) --------->ARR11(3) ------->TEIL <---------MYB46(3)    --------->AHL20(2)   atcagtaagagagaaaagttctcgtgacctaccatgaactcataagtgtccgttgaaccggatcatccgaattaaaaaaaaaaaatagacgttttcttcg  8961300                 <---------ANAC58                 <---------ANAC58                 <---------ANAC46      <---------YAB1   --------->AHL20(1)                  --------->ANAC58       --------->ATHB12   <---------AHL20(2)                  --------->ANAC58  <---------ATHB12   --------->AHL20(2)        ---------->DOF2 --------->AHL20(2)    <---------YAB1 <-----------GT1  --------->AHL20(2)        <---------AHL20(2)         --------->WOX13(1)  ----------->GT1   acaaaaaaattatagatttgtgtgagtcatttaaagcatgtaagcatttaaaactttcaatcactgattgtaatagatggaaaattacgatgttaacaga  8961400                                                          --------->ARR14(2)                                                          <---------ARR14(2)                                                      --------->YAB1                                                     ----------->GT1                                                     <---------YAB1                                                   -------->HAHB4                                                   <---------ICU4                         --------->ANAC46                                             --------->TOE2(3)                            --------->ANAC58                                            ----------->GT1                               --------->ANAC58                                --------->HSFB2a(1)--------->YAB1                        --------->LBD16                               <---------TOE2(2)  <---------ATHB51                   --------->ARR14(2)       <---------ZAT6          <---------TOE1(2)  --------->ICU4                     <---------ARR14(2)   --------->ZAT14             <---------TOE1(3)--------->YAB1                ---------->DOF2      <-   aattgtatagtcttaactataaatacactttcgaaggttttaaatctcgttaataatgaaaatactcacacatatgtatggaaagagtatccacgaaatt  8961500                                                                   <------ZmHOX2a(1)             ----                                                                <---------LBD16                  <---                                                           <---------ARR14(2)                    ----                                                           <---------ARR11(3)      <-----------GT1 <-                                          ---------->DOF2  --------->ARR14(2)     --------->AHL20(2)-                                       --------->TOE1(3)   <---------GLK1(2)   --------->YAB1   <----                                       --------->TOE2(3)   --------->ARR11(3)<---------YAB1     -----                                 <---------ICU4      --------->ANAC58   <-----------GT1         -----                  --------->ARR14(2)   --------->YAB1--------->ANAC46<---------GLK1(1)          ----- --------ANAC46   <---------ARR14(2)<-----------GT1  --------->ANAC58--------->GLK1(1)          <----   tgagtgaaatgcccatagtatatatgcattccaaatttttaccataaaacaaaacacaccagattttcaggaattcactattaataaactataccaaaat  8961600                                                                                      ----------->GT1                                                                                    <----------ID1  <---------YAB1                                                                    ----------->GT1 ---->ATHB1                                                                  <---------------AGL15 ------ICU4                                                   <<<<<<<<<<WRKY26     ------------------ ----->YAB1                                                   <<<<<<<<<<WRKY38    --------->DAG2 --------YAB1                                                 <<<<<<<<<<WRKY43   ---------->DOF2 -------->AHL20(2)         ----------->TBP     --------->ANAC58             ----------------->AGL3 -----YAB1  <---------AHL20(2)                 --------->ANAC58           --------->ANAC46 ---->AHL20(1)             --------->AHL20(2)  --------->ANAC46           --------->ANAC58 ---->AHL20(2)       ------>ZmHOX2a(1)---------->DOF2    <------------CBF --------->ANAC58 ---->ICU4 --------->AHL20(2)   <---------AHL20(2)     <-------TEIL     --------->ANAC46           >> -----AHL20(2) <---------ICU4   --------->AHL20(2)    --------->AtLEC2  <---------ALFIN1   ----------   tattatttatgcattaaatattcctctgtataaataaaatcaaaggcctacgaaacatgcattggtcaaattacacacaccaaaaaaggagaaaaacaga  8961700                                                                                ---------->DOF2                                                                            ------>MYB83                                                                        -------->P                                                                        ------>MYB46(1)                                                                        ------>MYB83                                                                      --------->AtMYB61                                                                      ------->GAMYB                                                                     --------->MYB46(3)                                                                     <---------MYB52(2)                                                                     <---------MYB55(2)          ---------->DOF2                                           --------->ANAC58 ------>ANAC81   ---------->DOF2                           <----------DOF2  ------>MYB46(1) >>>>>>>TBF1--------->ICU4                             <-----------GT1<---------MYB111(1) -------------->ANAC81                             <----------DOF2  --------->ANAC58   <---------YAB1   agaagaagagagcaaagatgaaaggcattgcgatgttattggtttcatgtcttcttttctcctttctctcaaccaacctagccaaaggtatcattctcat  8961800                                          <---------AHL20(2)                                          --------->AHL20(2)                                         <---------ATHB12                                           <                                     --------->MYB46(3)                                             -                   <---------YAB1  <---------DOF5.7(2)                                              -                  <-----------GT1--------->DOF5.7(2)                                             <---             ----------->GT1    <-------GAMYB                                              --------->O2           <------------MYB.PH3(1)--------->WRKY38(1)      ----------->GT1                 --------->ANAC58         <-----------GT1       <---------ANAC58   --------->LBD16                          --------->ANAC58        ----------->HVH21      <---------ANAC58  --------->LBD16                           <---------ANAC55(2)      --------->ANAC55(2)     <---------ZAT18   <---------LBD16                            <---------O2   attttcatatgtaaccggtttatcaataccagtgcgttaaccaataaaatcccggttcaaaatgtaaaacacatacaatacaatctcattaacacgtcta  8961900                                                              ======================HOX2a_HOX2a                                                              <---------ANAC58                                                <---------bZIP60(2)          <------ZmHOX2a(1)                            --------->DAG2      <---------ANAC58 <---------ZAT14                           ---------->DOF2      <---------ANAC46 --------->ZAT18                       <---------ZAT6         <------ZmHOX2a(1)  --------->ZAT14             ------->MYC3                  --------->ANAC58            =======================HOX2a_HOX2a             <-------MYC3 ---------ARR14(2)--------->ANAC58        ---------->DOF2     ------>ZmHOX2a(2)           <---------ALFIN1 ------>TEIL     ------->TEIL  --------->ALFIN1 <---------ANAC58 <---------ZAT18     --------->ANAC46 -------->ARR14(2)--------->ANAC46<---------ANAC46            <---------ANAC58       --------->ANAC58 ------ANAC46<---------------AtSPL8   --------->WOX13(1)    <---------ARR14(2)       --------->ANAC58   cgtatattgtttgaatatgtacgcagagttaaagtggtgtccatcaaaggacgtgttcaatggatcgtgcacagacacaggaagtccaagctacacatgt  8962000                ------>ZmHOX2a(2)               <------ZmHOX2a(2)              --------->ARR11(3)              <---------ARR11(3)                                 ------>ZmHOX2a(1)                 --       <-----------RAV1(1)                             XXXXXXXXXXXXXXXXXXXX>MIR847               <---       <---------MYB46(3)                           --------->ZAT14                            <-----    <---------GLK1(2)                               <---------ZAT18                ----------->HVH21 <---------HSFB2a(2)        ------->PIF5            --------->ZAT18     --------->YAB1         <----- --------->HSFB2a(2)        <-------PIF5  <---------ICU4   ------>ZmHOX2a(1)  <<<<<<<<<WRKY18 -------   tttctagatttgttgggatctaagagtgcaagtgctatgcctaagaattgcaaatgcactcctcttcctcacaatcgtcgtcaatgtgactgttttgtcg  8962100                                                                                                    <                                                                                                 <---                                                                                             --------                                             <---------TOE2(3)                               <------ZmHOX2a(2)                                             <---------TOE1(3)                              <--------                                        --------->YAB1                                      ---------                                        <---------ICU4                          <---------YAB1------>ZmHOX2a(2)                                       <---------AHL20(2)                    <---------YAB1 <-------- ----------->HVH21                     <---------YAB1                       <---------TOE2(3)<------- ------->MYB52(2)                    --------->YAB1     <---------AHL20(2) <---------ICU4   --------- ------MYB52(1)               <---------ANAC58         --------->AHL20(2)  --------->YAB1<------ZmHOX2a(1) ----ANAC58       <---------YAB1   <---------WOX13(1)  <---------AHL20(2) <---------ATHB51  <-------- ----ANAC58  <---------TOE2(3)<---------ANAC58----------->GT1 <-----------GT1--------->ICU4<---------GLK1(1) --->ID1--------->WOX13(1)    --------->TOE2(3)   --------->AHL20(2)      <---------ATHB12 --------->GLK1(1)   tttgtgacagcaattaagttattctttcgattccttgatttataattagggtttaaattttttttttccatcttcaataatgtttattgaaggagatctc  8962200  Previous    Next  AGI:  At4g15733.1    Description:  SCRL11 (SCR-Like 11). Identical to Uncharacterized protein SCRL11 precursor (SCRL11) [Arabidopsis Thaliana] (GB:P82630); similar to SCRL10 (SCR-Like 10) [Arabidopsis thaliana] (TAIR:AT4G15735.1); contains domain Scorpion toxin-like (SSF57095) Range:  from: 8961718    to: 8962117    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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