Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->At4g35610                                      --------->ZAT2      --------->At4g35610             <---------ZAT2      <---------At4g35610             <---------At4g35610     --------->ANAC46               <-----------RAV1(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----->MYB46(1)                --------->ANAC46                        --------->ANAC58 ----->MYB83  <---------WOX13(1)--------->DEAR3(1)                --------->YAB1 ------->RAV1(2)               --------->ANAC58                   <---------ICU4 ------HSFC1(2)                --------->ANAC58       <---------ZAT6   --------->ANAC58 ----->HSFC1(2)            --------->ANAC58      --------->YAB1  --------->ICU4 ----->HSFB2a(1)         ---------->DOF2        <---------YAB1 --------->YAB1         <---------ATHB12 ------HSFB2a(1)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   ------>ZmHOX2a(2)    ---------->ID1     xxx -->TEIL----------->RAV1(1)--------->ANAC58 <----------DOF2   --------->AHL20(2)  <------NtERF2 -----   cctgcctcagcaacagattgatgaacaacaagcacggcccagcaggctttgtcatagtgatcgattaataatcaagcctttggccccaataaccctatat  8944900              --------->YAB1            <-----------GT1         --------->YAB1        <---------AHL20(2)        <---------YAB1     --------->AHL20(2)                    --------->YAB1     <---------AHL20(2)                   <---------AHL20(2)     --------->ARR11(3)                   <---------YAB1     --------->AHL20(1)                  --------->AHL20(1)     <---------ARR11(3)         --------->AHL20(2)     <---------AHL20(1)      --------->AHL20(2)  --------->YAB1            <---------AHL20(2)  <---------AHL20(2)        --------->AHL20(2)       <---------AHL20(2)  --------->AHL20(2)      --------->YAB1 <---------AHL20(1) xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->YAB1                       <---------ANAC46 ---->ANAC55(2)        <---------AHL20(2)--------->AHL20(2)                  ----------->GT1   gtaataatatattataacataatattaaaaataaataaacaaatataataagtttttaatagaataaacatttgtagtctcgtataattttctcatgtct  8945000                                                                                                    -                                                                                                    <                                                                                                  ---                                                                                                <----                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                           --------->ANAC55(2)                                                                                           --------->ANAC58                                                                                           <---------ANAC55(2)                                                                                           --------->ANAC58                                                                                           --------->ANAC55(1)                                                                                          <---------LBD16                                                                                          <-------TEIL                                                                       --------->ZAT14   --------->ARR14(1)                                              ----------->HVH21    <---------ALFIN1      --------->CCA1(2)                                             <-------TEIL        ------>NtERF2          <---------ARR14(2)                          --------->GLK1(1) --------->CCA1(2)    --------->LBD16        <---------GLK1(2)               <---------At4g35610         <---------ARR14(2)   --------->ANAC58        --------->ARR14(2)               <------MYB83                --------->ARR11(1)   --------->ANAC58        --------->ARR11(1)               <------MYB46(1)             --------->ARR14(2)   --------->ANAC46      ----------->ARR10               ----------->GT1            <---------GLK1(1)    <---------LBD16  --------->At4g35610 <              <---------MYB46(3)---------->DOF2         --------->MYB52(2)   --------->At4g35610-----   agggtttcgaacgaggctggtgattccgatatcacaaagtttggagattcgacagagttcgtttctccgccactgaagaagcagaagacagatacggatc  8945100                                                           <----------TaMYB80                                                           --------->KAN4(1)                                                          <---------ARR14(2)                                                          <---------KAN4(2)                                                       --------->LBD16                                                      --------->HSFB2a(2)                                                      <---------HSFB2a(2)                                                      <---------ANAC55(2)               <------ZmHOX2a(2)       ----------->GT1                                --------->ANAC55(2)               ------------>CBF      <---------TOE2(3)                              <---------LBD16                  <------ZmHOX2a(1) --------->GLK1(2)                                   ------>ZmHOX2a(2)          <----------DOF2 -------->ARR14(2)                         --------->TOE1(2)     ----------->HVH21  <---------TOE2(3) ---------GLK1(2)                       <---------ARR14(2)---------->TaMYB80   ==============HOX2a_HOX2a ------>LBD16                          =====================HOX2a_HOX2a        ------>ZmHOX2a(2) -----LBD16                   <-----------------AGL1<------ZmHOX2a(2)         <---------YAB1 -ZmHOX2a(2)              --------->ARR14(2)       --------->ARR14(2)        <---------ARR11(3) ---ARR14(2)              <---------ARR14(2)       <---------ARR14(2)        --------->ARR11(3) -->ARR14(2)     --------->LBD16       <------ZmHOX2a(1)  --------->ARR14(2)--------->YAB1    ------- ---------ARR14(2) ---------->DOF2     ====================HOX2a_HOX2a    <---------KAN4(2)   <------ ->ZmHOX2a(2)   --------->ANAC46 --------->LBD16 ----------->ARR10    <---------At4g35610    --------   cggattctgaggtaaaacccgaaaatcgaattctccgaagaggaaactgggacgatccggaatatgcgagacagcgaatgatctttgaggatcaatttaa  8945200                                                    ------>ZmHOX2a(1)                                                   --------->TOE2(3)                                                   --------->TOE1(3)                                                --------->ARR11(3)                                                <---------ARR11(3)                                              <---------YAB1              --------->ARR11(3)            --------->YAB1      ----------->GT1                      <---------YAB1    --------->At4g35610 -->AHL20(2)  <---------ARR11(3) ==========================HOX2a_HOX2a       <----------------------- ---AHL20(2)  --------->AHL20(1) ------>ZmHOX2a(2)------>ZmHOX2a(2)   ------------>CBF ->AHL20(2)  ----------->TBP   --------->ARR11(3)<---------YAB1   ------->TEIL        <-----------RAV1(1)   aaacagcgaggtgatatatattccatagcctttgatctagtttttatgatgatccttagaatcagatgtatgtgcaatttgtttgtttttgttgcatcct  8945300                                                                                --------->ATHB12                                                                        <---------MYB52(1)                   <---------YAB1                                      --------->LBD16                <------ZmHOX2a(2)                                     <---------ANAC58        --------->AHL20(2)                                            <---------ANAC58       <---------AHL20(2)                                             <---------ANAC46    --------->AHL20(2)                <---------ANAC46              ------>NtERF2    <---------AHL20(2)               <---------MYB46(3)          ----------->RAV1(2)   <---------AHL20(2)                --------->ATHB12            <---------ANAC58                <---   <---------AHL20(1)    <---------ZAT6<---------WOX13(1)        <---------ANAC58   <---------LBD16 <   --------->AHL20(2)   <---------TOE1(3)                 --------->REM1(1)    <---------YAB1-------- -ANAC81<---------AHL20(2)          <---------YAB1  --------->WRKY38(1)--------->At5g28300 --------->ICU4   tgtaattaatttatatggatcatcttagggttacgatgttgattggagtaaatgttgactacaacttccctgccgtgaatttcgattggggaaatgattt  8945400                         <---------TOE2(3)                <---------ICU4                                 <----------ID1                --------->YAB1                       <---------TOE2(3)               --------->ICU4                        <---------------------WRI1 ------YAB1    <---------ATHB12                     >>>>>>>>>WRKY18      --------->LBD16 ---------YAB1 <---------ATHB51                    --------->WRKY12    <---------LBD16 ->ARR11(3)  --------->YAB1  ------->TEIL          ----------->HVH21  --------->MYB52(1)   tgatgatcaaatgaacaataatgagttaatgaaactgctcatagagactgccattgacgaagaaaacgaagaaaccggaacaagacttgagtttgtcaag  8945500                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                           ------>MYB46(1)                                                                <----------DOF2                                                               =============HOX2a_HOX2a                                                               ------>ZmHOX2a(2)                                                              ==============HOX2a_HOX2a                                                              <------ZmHOX2a(2)                                                             <---------ARR14(2)                                                             <-----------ARR10                                                             --------->ARR14(2)                   ---                          <---------TOE1(2)                  <---------ARR11(3)                   ---                          <---------TOE2(2)                  --------->ARR14(3)                   ---                      <------NtERF2                          <---------ARR14(3)                   ---                    <---------ANAC58                         --------->ARR11(3)                   ---                    <---------ANAC58     --------->ANAC55(2)--------->RVE1(1)        ----------->RAV1(1)                    <---------ANAC46   <-----------GT1   ---------->DOF2   ------>MYB83           ---              ------->TEIL<---------TOE2(3)     --------->GLK1(2)    ------>ZmHOX2a(1)       <-------   tatgtgagtgcaaatgtacttggcgtccaaggttttttgttttacataacattctgggcaaaagatctttcctcaccaaatccacagccacattgttacc  8945600                    <---------At4g35610                    <---------ZAT2                    --------->At4g35610                   <---------RAP2.3(1)             --------->HSFC1(2)   --------->DAG2 <---------ANAC58  ---------->DOF2 <---------ANAC58                                            ----------->GT1 ------>AtLEC2    <---------RRTF1(2)                                          <---------ANAC46 ------ --->MYB83========================HOX2a_HOX2a                     --------->YAB1              ------- --->MYB46(1)<---------HSFC1(2)    --------->MYB52(2)            --------->ICU4             <-------- ------>ANAC58    <---------RAP2.3(2)                           <---------KAN4(2)<-------TEIL ------- ------>ANAC46    <---------RAP2.6(2)                      ---------->DOF2   --------------->AtSPL3 ------>ANAC58   <---------LBD16 <---------MYB52(1)      --------->MYB46(3)  <---------------AtSPL8 ----GT1  <------ZmHOX2a(1)<------ZmHOX2a(2)           ----------->RAV1(1)   --------------->AtSPL8--   aagcaaaagtgaggaagtttgcggctgagatcgacgttagtgagtttaggctaaggccaacaaaagaatgatcaattgtgaggtacaacttcttatcctt  8945700                                                   <---------HSFB2a(2)                              -        <---------ANAC58                 --------->YAB1                                    <--------- --------->ANAC58                        --------->TOE2(3)                               <---------At4g35610 --------->ANAC58    <------MYB46(1)   <---------ARR14(2)            <---------ICU4      --------->At4g35610 >ZmHOX2a(1)         <------MYB83      <---------ARR11(3)            --------->YAB1    --------->ZAT14 -->TOE2(3)         --------->MYB59    <-----------ARR10            --------->ICU4     <---------ZAT14 -YAB1  <---------ANAC58               --------->ARR11(3)      <---------At4g35610     <---------ZAT18 -->TOE1(3)--------->REM1(1)  <---------YAB1       --------->HSFB2a(2)  <---------ICU4 --------->ZAT18 ------->ZAT6     <---------MYB52(1)  --------->RVE1(1)      <-----------RAV1(2) --------->GLK1(2)  <   aacacgaatggcttcatcttgttaggtcatttcttattgaatatcttaatcttctcgatgtatacaggtgataatcacttccaattctgtgcgcttccag  8945800  Previous    Next  AGI:  At4g15715.1    Description:  cysteine protease inhibitor. similar to cysteine protease inhibitor [Arabidopsis thaliana] (TAIR:AT5G56920.1); contains InterPro domain Cystatin-related, plant (InterPro:IPR006525); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) Range:  from: 8945315    to: 8945932    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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