Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->ARR14(2)                                                                            --------->ZAT14                                                                            <---------ZAT14                                                                            <---------ARR14(2)     --                                                                         <---------ANAC46        ----                                                                         <---------ANAC58      ------                                                                         <---------ANAC55(2)   <-----                               --------->At4g35610------>ZmHOX2a(1)      <---------ANAC58  ------>NtERF2                    ------>ZmHOX2a(1)            --------->TOE2(3)       <---------ANAC55(1)<------NtERF2      ----------->HVH21--------->YAB1        <---------GLK1(1) <---------WRKY18(1)        <----------ID1   tttcacatatgacgaatacatcctagcatcagtagctctctacttggacatcctcaatctcttcttgaccatattgcgtatactgaggcaaggcgacaac  8845500                                                                                      <--------------                                                                                      ---------------                               ------>ZmHOX2a(2)                            <---------ARR14(2)                         <---------ANAC46                       <---------MYB52(1)<---------GLK1(1)                         <---------bZIP60(1)        --------->ARR14(2)      --------->ARR14(2) -------->DOF2           --------->bZIP60(1)        --------->GLK1(2)       <---------ARR11(3) --->GAMYB              <-----------------------TaNAC69(2)     <----------DOF2    --------->GLK1(1) --->At4g35610         --------->ZAT14              <---------ARR14(2)     <---------CCA1(2)        < ----At4g35610         <---------ZAT14  <-----------GT1  ---------->DOF2   <---------GLK1(1)        <   tgaaaggcataaaacgatgcttcagtgatgtgatccagtttataactataagagaatccaaaagcctttatgtgtgtatatctgatttctgtttggagaa  8845600                                                                                       <---------LBD16                                                                                   <---------ICU4                                                                       <---------AHL20(1)                           <---------WOX13(1)                          --------->AHL20(2)                         --------->ATHB12    --------->ANAC58          --------->AHL20(1) -AGL15           <-------GAMYB              --------->ANAC58          <---------AHL20(2) <------NtERF2 >AGL15          ----------->GT1             --------->ANAC46         --------->AHL20(2) --------->LBD16 ---------ANAC55(2)      xxxxxxxxxxxxxxxxxxx>smallRNA(i2) <-----------GT1   ----------->GT1 ---------TOE2(3)<---------MYB46(3)         --------->WOX13(1)        <---------AHL20(2)<---------ANAC46   ttaagtatatgatgctatgtggttaaacgattgatataaacaaaatcaagcaatgtcgattttcaacttcaaataaatttgttaattttggcggaatttt  8845700                                                                             <---------AHL20(2)            --------->ARR14(2)                                 --------->MYB52(1)            <---------ARR14(2)                                 ------>MYB83  --------->AHL20(2)           <---------CCA1(2)      <---------ANAC58           <---------MYB59--------->AHL20(2)         <---------ANAC58         <---------ANAC58        <-----------GT1 --------->ARR11(3)         <---------ANAC58      <---------WOX13(1)       --------->YAB1    <---------ARR11(3)  -------        ---------->ID1       --------->ATHB12 --------->ANAC58 ------>MYB46(1)        <---------YAB1   <----------DOF2          <---------YAB1    --------->ANAC58--------->MYB55(1)  <---------At5g28300  <---------DAG2         --------->GLK1(2)  ---------->DOF2  <---------MYB46(2)  <-----------GT1<----   gatgccttttgtcgtatccatttcgatattctgattgcttaagagcaaaagcaaacattgataccaaacgtttgaagatttatttaccatcatcgataaa  8845800                                                                          ------>NtERF2                                                                          --------->LBD16                                                                         --------->ANAC58                                                                         --------->ANAC46                                                                         *TSS                                                                         --------->ANAC58                                                                        --------->MYB46(3)                                                                      <---------ARR14(2)                                                                      --------->ARR14(2)                                                                    --------->MYB46(3)                                                                    --------->DEAR3(1)                                                                  ------>MYB46(1)                                                                  --------->MYB52(1)                                                                  ------>MYB83                                                                 <---------ALFIN1                                                                 --------->MYB55(1)                                                                <---------MYB55(2)                                                          <---------At4g35610                                                      --------->AtMYB61<------ZmHOX2a(2)       <----------DOF2                               --------->bZIP60(2)------>ZmHOX2a(2)    <-----------GT1          --------->ANAC46  --------->DAG2   --------->MYB46(3)                  - -->AHL20(2)     <---------DAG2               ---------->DOF2<-----------GT1                        < --------CBF     <----------DOF2         --------->ANAC46 --------->At4g35610             >>>>>>>>>TBF1   ttgtttttactttgctctcctttttttttaaactcaaccatacacaaaaaaagcgacctcatcttacccaccgatccgccattacagacgaagaagaatt  8845900                                                                                     ------>NtERF2                                                                                    --------->DEAR3(1)                                                             <-----------ARR10    ------>NtERF2                                                            <------ZmHOX2a(1)     --------->LBD16                                          <-----------GT1<------NtERF2           <---------LBD16                                    ===============================HOX2a_HOX2a  <---------LBD16                                    ------>ZmHOX2a(2)   --------->LBD16    <---------ARR11(3)                                   <------ZmHOX2a(2)  <---------LBD16      --------->ARR11(3)  ------->GAMYB                    ================================HOX2a_HOX2a--------->GLK1(2) -------->At4g35610             <---------YAB1    <---------ANAC58         --------->ARR14(2) ---------At4g35610         <-----------HVH21     <---------ANAC58    ------>ZmHOX2a(1)<---------ANAC46   tcaactgcaatctctctctgaaccatgagaggtcacgatcggattaacaattgtttgccggaggaacttatcctcgagatattccggcgacttgaatcga  8846000                                                                          <---------ARR14(2)                                                                  --------->ANAC46                                                                  --------->ANAC58                                                                  --------->ANAC58                                                                <---------ALFIN1                              --------->ANAC46                --------->SPL7              <----------          --------->ANAC58    --------->ANAC58               <---------ALFIN1   --------->ABI4(2)          --------->ANAC58    --------->ANAC58             --------->RAP2.6(2)  ------>NtERF2  ------   --------->ARR14(2) --------->O2  <---------MYB46(3)     --------->DEAR3(1)  <---------DEAR3(1) ---   <---------ARR14(2) --------->TGA1a<-------GAMYB         --------->ANAC46 <---------DEAR3(1)-------  <---------GLK1(2)   =======================MYC_MYB    <-----------GT1   --------->ARR14(2)  -------   aaccgaatcgcgacgcatgctccctcgtctgcaagcgatggttatctctcgagcgatttagccgcaccacgcttcgtatcggcgcttcgttttctcccga  8846100                                                              <---------GLK1(1)                                                              --------->GLK1(1)                                                             <---------ARR11(1)                                                             --------->ARR14(2)                                                             <---------ARR14(2)                                                             <-----------ARR10                                                             ------->TEIL                                                            <---------CCA1(2)     <---------At4g35610                                    <---------ARR14(1) -GT1--------->At4g35610 <----------DOF2              <---------MYB52(2) >NtERF2                 <---------DAG2            <---------ETT(2) --->NtERF2          ---------->ID1               --------->DDF1 ---->HVH21   ------>ZmHOX2a(1)        --------->TOE2(3) ------->TEIL                         ------- -->LBD16     <---------CCA1(2)     <-----------GT1--------->ETT(2)                       ------>ZmHOX2a(1)   cgacttcatctccctcctatctcgtcgctttctctatattacctctatccatgtcgacgaacgtatctccgtctcccttccttccctctctccttcccca  8846200                                                         <---------ZAT14                                           ------>ZmHOX2a(2)                                         <---------ARR14(2)                                       <--                                         --------->ARR14(2)       <---------YAB1     <---------AHL20(2)                                  <---------YAB1      <---------ANAC46            --------->TOE2(3) -                        <-------GAMYB ------>ZmHOX2a(2)  --------->ZAT14          ----------->GT1 --- -->LBD16              <-----------RAV1(1)<------ZmHOX2a(2)     --------->YAB1   ----------->GT1  <--   gtatgtttctctcatcgaaatttttctgttgaatttgtgatcggatcgagcagtttttgtgtagtatcatgaattcgattgaaatgttaaattttgtatc  8846300          --------->At4g35610                                                                  ------          <---------At4g35610                                                        <---------YAB1    <---------ARR14(2)                                                              --------->AHL20(1)    --------->ARR14(2)        --------->MYB52(2)                                    <---------AHL20(2) -------AGP1  --------->MYB52(2) <---------AHL20(2)              <---------TOE1(3)  <---------AHL20(1) ----->ZmHOX2a(2)           <---------MYB52(1)                   <---------TOE2(3) --------->AHL20(2) ------>ARR14(2)          <---------ZAT6                         <---------YAB1    --------->YAB1 -------ARR14(2)   <---------TOE2(3)                  <---------GLK1(1)         --------->WOX13(1)   gatctggatttgagcttagttgagattagcgttatttgattctgaattgtatttggatatttgagttatggtttacacttatcaattatatttgcagaaa  8846400  Previous    Next  AGI:  At4g15470.1    Description:  Identical to Protein FBL4 (FBL4) [Arabidopsis Thaliana] (GB:Q94A20;GB:O23399;GB:Q940C4); similar to glutamate binding / [Arabidopsis thaliana] (TAIR:AT1G03070.1); similar to unknown [Populus trichocarpa] (GB:ABK94990.1); contains InterPro domain Protein of unknown function UPF0005 (InterPro:IPR006214) Range:  from: 8843565    to: 8845808    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g15475.1    Description:  F-box family protein (FBL4). similar to F-box family protein (FBL3) [Arabidopsis thaliana] (TAIR:AT5G01720.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75354.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71070.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 8845873    to: 8848867    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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