Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->ANAC58                                                       <--                           --------->ANAC55(2)                                                    ---                           --------->ANAC58                              --------->TOE1(3)      -----                      <-----------GT1                                    --------->YAB1        ------              <---------DAG2       <-----------GT1           <----------ID1                    ------              <----------DOF2 ------->TEIL             --------->YAB1    --------->TOE2(3)   --------       --------->WOX13(1)  --------->ANAC46        <------ZmHOX2a(1)  <-----------GT1     <----------   ttgaagtgtccatcaactttatattatccacgtattttaaacacattagattaggaatcaaaaacaccaaaataaccatagccactagttgtttacccac  8827500                                              --------->DOF5.7(2)                                   ----------->GT1                                  ----------->GT1                             <---------HSFB2a(2) -------ZAT14                --------->HSFB2a(2) ------>ZAT14                <---------HSFC1(1) ---->ANAC46               --------------->AGL15                     --------->ZAT18 >MYB83             <---------AHL20(1)      --------->ANAC46         <---------ZAT18 >MYB46(1)          --------->AHL20(1)     <---------TOE2(3)       --------->At4g35610 ->MYB46(3)         <---------ARR11(3)    <-----------GT1        --------->DAG2               <------ -GT1<---------ATHB12      <---------------AGL15                ---------->DOF2               <------   tgaacaaatcaaaaatttccaatatttttctctagaagggaaataaacgttaccagacaaaatccaaaaagctcactaccatctactattgagttttctt  8827600                                                                                                  <--                                                                                                  ---                                                                                                  ---      <----------DOF2                                                        <----------DOF2--------- <---------At4g35610      --------->ZAT14          <-------TEIL           <-----------GT1<----------DOF2 ---ANAC58                <---------ZAT18   --------->YAB1            <---------YAB1 <----------DOF2 ---ANAC58  <-----------HVH21            <----------DOF2        --------->GLK1(2)<----------DOF2  <--   gtcatcttctttttggtcacggttttagtttactcttgagtctctttcatagtttcatagcaagagcatcttattatttctttctttctttctttcatag  8827700                                                                     --------->ANAC46 --------->AHL20(1)     --------->YAB1                                                  --------->ANAC58 --------->AHL20(2)   --------->At5g28300                                ---------->ID1 --------->ANAC58 <---------AHL20(1) -------ZAT14                                 <----------DOF2        --------->ANAC55(2) ------>ZAT14                              <---------ALFIN1       <---------REM1(2)   <---------AHL20(2) ------>ZAT18                          ------>ZmHOX2a(1)  <----------DOF2            <---------ATHB12 >YAB1                             <---------ALFIN1  <-----------GT1<---------LBD16  --------->AHL20(2) -------ZAT18                <-----------GT1  <---------DAG2  <-----------GT1    ------------>CBF   ttcactgtaataaacttagaaggctcacattttgccaactcctcaacactttatttttctcttttttcttcacggatttataaaccaataaatttgcagt  8827800                                              --------->ANAC58                                              ----------->GT1                                              --------->ANAC58                                           <------NtERF2                 =======================HOX2a_HOX2a                 ------>ZmHOX2a(2)        --------->LBD16               --------->ARR11(3)        <---------LBD16               <---------ARR11(3)        --------->ANAC46                   *TSS              --------->YAB1            <---------LBD16                --------->AHL20(2)            <---------KAN4(2)    ------>ZmHOX2a(1)                 <---------YAB1                  << <----------DOF2<---------YAB1  --------->TOE2(3)     --------->GLK1(2)<---------AHL20(2)    <-------   aatctttttagtcgaatgatctttgaacatatttcctaaatacccggcaagaaaaaattctgaatttttctcattaatttctccaaaaatacaaactttt  8827900                                                                                           <---------ARR11(3)                                                              ---------->DOF2        <---------HSFC1(1)                                                 --------------->AGL15               <---------HSFB2a(2)                                   <<<<<<<<<TBF1<---------ANAC58         <----------DOF2   --------->ARR11(3)     ------>ZmHOX2a(1) ------>ZmHOX2a(1)        <---------ANAC58       ---------->ID1--------->HSFC1(1) <<<<<<<TBF1        ------>ZmHOX2a(1) <<<<<<<<<TBF1          <---------ATHB12   <----------DOF2 ---DOF2      <<<<<<<<<TBF1     <<<<<<<<<TBF1<---------MYB52(1)    <----------DOF2   --------->HSFB2a(2)   cttcttcctctgtttcttcttcctcctctgtttcttcttcttcttctgttacttacaagagcaataaagctttgtcttttagcttttctagaaggtattt  8828000                        <---------ZAT14                   <----------DOF2            <----------DOF2                ----------->HVH21           ------>ZmHOX2a(2)         ----------->HVH21         --------->ARR11(3)      <---------ANAC58         <---------ARR11(3)      <---------ANAC58                                            --------    ------->TEIL<-----------GT1  <---------ANAC46              <----------DOF2   <-----------HVH21   gaattgaatctgatcttttttctttcttcagtgttgtttgtgactgtgacatatagttcatgtttctttttggatgctctctgtgtcaaacaaaaaaaca  8828100                    --------->HSFC1(2)                    <---------HSFC1(2)                    --------->HSFB2a(1)                   <-------GAMYB          <---------RVE1(1)                               --------->At4g35610             <---------ARR14(2)          <---------CCA1(1)                              <---------MYB46(3)               --------->ARR14(2)         <---------ARR11(3)  --------->TOE2(3)  --------->ARR14(2)                        <---------ARR11(3)         --------->ARR11(3) --------->REM1(1)   <---------ARR14(2)      <-----------GT1   <----------       <---------TOE2(3)  ------>ZmHOX2a(1)     --------->GLK1(2) <----------DOF2         --------->ARR11(3) ->MYB52(1)         <---------HSFB2a(1)         ------->TEIL   ------->TEIL  <------ZmHOX2a(1)  <----   gagcaagttgagattttttggaaatttcctacatcaacttgcaaagtctgaatctgtgtctgttgaatctttttttacaggaagagtagtagtatcttct  8828200                                                  <---------YAB1                                                --------->YAB1                                               <---------ATHB12                                              --------->ANAC58                                              --------->ANAC58                                   ----                                           --------->At4g35610                               <-------                                          --------->RAP2.6(2)                    <----------DOF2<----                                        <---------At4g35610           <XXXXXXXXXXXXXXXXXXXXXMIR855                                        --------->At4g35610          <---------DAG2    <------------- <-----------GT1          --------->ARR11(3) --------->WOX13(1)      <----------DOF2   -------------- -ARR10               <-----------GT1   --------->ZAT2              <---------ANAC58   ============== ------DOF2      --------->REM1(1)   --------->At4g35610            <---------ANAC58   ==============   ttttcacagtctcatggctacaataaacgatattggagtagcagcagcaatcaatatagtcacagcatttgcttttctcttagcttttgctatattcagg  8828300                           <---------------AGL15                           --------------->AGL15                           ==========================================================================                           ----------------->AG                          ===========================================================================                          ===========================================================================                          ----------------->AG                          <-----------------AG                          <-----------------AGL2   --------->MYB46(3)     ----------------->AGL2 ----->ARR14(2)           <-----------------AGL1 --LBD16                  ----------------->AGL3                                <---------AtMYB61 --ZmHOX2a(1)             ----------------->AGL1                              <----------DOF2 --AGL15                  <-----------------AGL3                             <---------ANAC58 ->AGL15   ----------->HVH21      ----------->GT1                            <---------ANAC46 ===========================================MADS_MADS                        <---------ANAC58 ==========================================MADS_MADS                        <------NtERF2  <-------TEIL   attcaaccagtaaatgacagagtctatttccctaaatggtatctcaagggcttaagaagtagttctatacaaactggtggctttggtagcaaattcatca  8828400  Previous    Next  AGI:  At4g15430.1    Description:  similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G04340.1); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G04340.3); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT3G21620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24038.1); similar to CM0545.360.nc [Lotus japonicus] (GB:BAF98597.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69661.1); contains InterPro domain Protein of unknown function DUF221; (InterPro:IPR003864 Range:  from: 8827876    to: 8831503    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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