Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->ARR11(3) ---------ID1                                                                <---------YAB1 --------->GT1                                                              <---------ARR11(3) -------->GT1                                                              <---------GLK1(1) ----->DAG2                 ------>MYB46(1)                                --------->GLK1(1) ----->DOF2                 ------>MYB83                      <---------HSFB2a(2)      <---------ARR11(3) --ID1                  ------->TEIL                          --------->HSFB2a(2)     <---------CCA1(2) ----TaNAC69(2)<---------ANAC46    ----------->GT1    <---------ZAT6     <------ZmHOX2a(1)  <--------   aaggaaaaaatagaatgatgtgaatgaacctagccaaatgttataagcatatataagtgttactcgagaaccataggatatcatttgtaaatcttggtta  8823300                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                               ------                              --------->ANAC58                                              ---------                              --------->ANAC58                                           <-----------                              --------->ANAC46                                         <---------GLK1(1)                             --------->ZAT18           ----------->GT1                 --------->GLK1(1)                  <---------ICU4         ----------->GT1 --------->AHL20(2)--------->AHL20(2) <------        <-----------GT1      <---------ZAT18     --------->YAB1 ----------->GT1       <---------ARR11(3) -MYB46(3)       <---------YAB1  ----------->RAV1(1) ---------->DOF2    --------->YAB1--------->ARR11(3)   gagacccatattacctctgatcatggcatagcacacaacaaaatagtttattcataaaagtaaatatagtttattcataaaatacaaagatttccaatca  8823400         --------->ANAC58  ----------->GT1 ----->ANAC58 ----->ANAC58 ----->ANAC46 --->YAB1--------->ANAC58                                     --------->ANAC58        --------->DAG2 >WOX13(1)                                                    --------->ANAC58   <-------TEIL  ------ ----------WRI1                     --------->YAB1   <-------TEIL       ---------->DOF2<---------TOE2(3) ---ATHB12                <----------DOF2            ------->TEIL <---------ANAC55(2)---------->DOF2   cacaatgtaacaagcacaaataagtatacttttacttataagaagacatcggatgtacgtagacaaacaagtatcaaagtatgttcataaaggaaaacaa  8823500                           <-----------HVH21                          --------->TOE1(3)                          --------->TOE2(3)                        --------->ARR11(3)                  <-------GAMYB--------->ANAC58                       <------ZmHOX2a(2)         -----                 <------MYB83  --------->ANAC58              --------->ARR14(2)                 -----                 ----------->GT1                             <---------ARR14(2)       <---------DAG2                 <------MYB46(1)   --------->ANAC58--------->ANAC58  --------->AGP1   <----------DOF2                <---------MYB46(3) --------->ANAC58--------->ANAC58 <---------At4g35610         ----- ---->DOF2     --------->ALFIN1--------->ANAC46  ---------->DOF2    --------->At4g35610      <-------   agttcgcattcaacaaggtgggttaataccttcacgcatgcacaagtgatggaaagcaatacaaatactcagatcaacaaaatgacaactttttcagcaa  8823600                                                                           --------->ARR14(2)                                                                           <---------GLK1(2)                                                                           <---------ARR14(2)                                                                           <---------ARR11(3)                                                                         --------->LBD16                                                                        --------->HSFB2a(2)                                            <----------DOF2          ------>ZmHOX2a(1)                                     <---------ANAC58              ------>ZmHOX2a(2)                                     <-------GAMYB                 --------->HSFC1(2)                                     <---------ANAC58              --------->HSFB2a(1)                                    --------->ATHB12               <---------HSFC1(2)                                    <---------MYB46(3)             <---------HSFB2a(1)                                 <---------ANAC58                 <------ZmHOX2a(2)                                 <---------ANAC58                --------->ARR11(3)                      <---------ARR14(2)   <---------ANAC58      <---------GLK1(2)                      --------->ARR14(2)   <---------ANAC58      <---------ARR11(3)            <-----         <-----------GT1      --------->GLK1(1)                  --------->AGP1                <----- ---->ANAC58          --------->GLK1(2) <------MYB83             <---------ARR14(2)           ------- ---->ANAC46          --------->ARR11(3)<------MYB46(1)          --------->ARR14(2)<---------AHL20(2) ---->ANAC58         --------->RVE1(1)<--------P               ----------->ARR10 <----------DOF2  <-- --At4g35610   --------->AHL20(2)<---------ANAC46      ---------->DOF2  <---------HSFB2a(2)   <------   gcaatacaaatatacaatataaaaaatctggggtttcttggttgggcttgaatttgagaaaggcccagatccttccagatactctttatttgactaataa  8823700                                                          <----------DOF2        ------------>CBF                               <---------ARR11(3)                   ------>MYB46(1) ----ICU4                                              --------->ARR11(3)   ---------->ID1  ------>MYB83 ----AHL20(2)                                       <---------GLK1(2)      <-----------GT1 --------->WOX13(1) -->AHL20(2)              <----------DOF2        --------->YAB1    ---------->ID1         --------->AtMYB61 -------ICU4             *TSS                 --------->GLK1(1)   <------------------------ANAC81 ---ATHB12           ---------->DOF2          <---------GLK1(1)<----------DOF2<----------DOF2       <   atatcacaaaaacaattttctcttaaagcttttcttgaagaacaagagaaatcagaagctctttcctttgttttttttttctttttcttccaccaatcta  8823800                                       --------->At4g35610                                    <------ZmHOX2a(2)                       --------->ANAC58           --------->At4g35610   ----------->ARR10            <---------At4g35610       <---------ARR14(2)         --------->YAB1   <---------ANAC58                    --------->At4g35610       --------->ARR14(2)        <---------ATHB12  <---------ANAC58             ---------->DOF2      --------->ANAC58 --------->GLK1(1)     --------->GLK1(1)         --------->GLK1(2)        <------ZmHOX2a(1) ---------GLK1(2)      <---------GLK1(1)  ---------->DOF2     <---------ZAT14  ---------->DOF2   cagatttcgaatcatcagaaaatggatttcgagcttagatcagcgaaagagaagcttgaaagagagcagagagagaggaagcaaagagcgaaactgaaac  8823900                                 --------->ANAC58                                 --------->ANAC46                                 --------->ANAC58                        --------->TOE1(2)                       <---------At4g35610                       --------->HSFC1(2)                                       ------>NtERF2                       --------->HSFB2a(1)              --------->At4g35610    --------->ANAC58                       --------->At4g35610           <---------ZAT2            --------->ANAC46                       <---------HSFB2a(1)           <---------At4g35610       <---------bZIP60(1)                       <---------HSFC1(2)            --------->At4g35610       --------->bZIP60(1)                ---------->DOF2---------->DOF2    ---------->DOF2              --------->ANAC58  --------->ANAC58     <---------ZAT2      --------->ANAC58     --------->ARR11(3)  --------->ANAC58     --------->ZAT2      --------->ANAC58 ---------->DOF2 ----------->HVH21      <-   tcgaacgcgagaagaaatcaaaggaagctgcgattaagcaacgcgaagccattgaagctgctcaaagagctagaagacttgacgccatcgaagcccagat  8824000                                                   <---------ARR14(2)                                                   --------->ARR14(2)                        --------          --------->ZAT6                        <---------ANAC58                            ------>ZmHOX2a(1)       <---------CCA1(2)                        <---------ANAC58             <---------TOE1(2)     ------>ZmHOX2a(1)                          <---------ANAC46            ------>ZmHOX2a(1)-------- --------->ARR11(3)                           <-----------GT1  --------->At5g28300      <---------GLK1(1) --------TOE2(3)                      <-----------GT1         ----------->GT1<---------TOE2(2)   taaggtcctctatctctattcttactgggtttttagaatttgacaattttgcgtttcttctgtatggtaaatgctctcctaggtttttggattcctcgta  8824100                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                     <---------ANAC46         --------->ARR14(2)                                         <-------TEIL       <------MYB46(1)                --------->ZAT14             <---------GLK1(2)       <------MYB83                   <---------ZAT14             <---------ARR14(2)   <---------ANAC46       <---------YAB1                          --------->ARR14(2) ->TOE1(1) <-----------------AGL3 <---------HSFB2a(2)      <---------ZAT18 --->GT1 <---------ARR14(2)       --------->HSFB2a(2)      --------->ZAT18        <---------YAB1   aaattgtgtaggttctgcaattgggattttgattttgtagaacagtgtgattctaatctagttcaccagattcgtatatgtattacaaatgggtattgtt  8824200  Previous    Next  AGI:  At4g15420.1    Description:  PRLI-interacting factor K. similar to ubiquitin fusion degradation UFD1 family protein [Arabidopsis thaliana] (TAIR:AT2G21270.2); similar to ubiquitin fusion degradation UFD1 family protein [Arabidopsis thaliana] (TAIR:AT2G21270.1); similar to ubiquitin fusion degradation UFD1 family protein [Arabidopsis thaliana] (TAIR:AT2G21270.3); similar to CM0545.430.nc [Lotus japonicus] (GB:BAF98608.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24039.1); similar to hypothetical protein OsJ_002039 [Oryza sativa (japonica cultivar-group)] (GB:EAZ12214.1); contains InterPro domain Ubiquitin fusion degradation protein UFD1; (InterPro:IPR004 Range:  from: 8823725    to: 8826096    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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